Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGTCATGGAACTTGGAGAGCTGAAGAGGAATTTTGGGGAGTTGAAAGTTATTAACGAGAAGCAAGAATCTAGGGTGCGTTACCATGAAACCAAAGTGCAGAACATTGTAATTGGTTATCTCATTTGGGGATGCTCCTTCTTCTTTGCTGTCTCTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTTGTTTTGGCTATGAATCTGTTGTGTGCCTTTGTCTACTTTTTGCTTTTTCTGGATGCTGTCACTATGTTATGTCGGACCCAGTACCAGCTAGACTTAATGTGCGAGGAATTAACTGAAGTTTGCCAACAAATTTTGGTAGTAAAAAACGAAGGTGATGGTTTAATAGAGGCTGGAGAATCTTGTGATGCATTTGATTTCAGTTTCCATGAGAAGATACTCATGCTTGATCCTTGTAGAATTGTTGGGAGGAAAGTTTACATGTACTTCACTGTCTGTGCTTTGCTTGCTGTTACTGCTATTGAATTATATGGTTGCAAGTATTTGTTGTGCAAC
mRNA sequence
ATAGTCATGGAACTTGGAGAGCTGAAGAGGAATTTTGGGGAGTTGAAAGTTATTAACGAGAAGCAAGAATCTAGGGTGCGTTACCATGAAACCAAAGTGCAGAACATTGTAATTGGTTATCTCATTTGGGGATGCTCCTTCTTCTTTGCTGTCTCTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTTGTTTTGGCTATGAATCTGTTGTGTGCCTTTGTCTACTTTTTGCTTTTTCTGGATGCTGTCACTATGTTATGTCGGACCCAGTACCAGCTAGACTTAATGTGCGAGGAATTAACTGAAGTTTGCCAACAAATTTTGGTAGTAAAAAACGAAGGTGATGGTTTAATAGAGGCTGGAGAATCTTGTGATGCATTTGATTTCAGTTTCCATGAGAAGATACTCATGCTTGATCCTTGTAGAATTGTTGGGAGGAAAGTTTACATGTACTTCACTGTCTGTGCTTTGCTTGCTGTTACTGCTATTGAATTATATGGTTGCAAGTATTTGTTGTGCAAC
Coding sequence (CDS)
ATAGTCATGGAACTTGGAGAGCTGAAGAGGAATTTTGGGGAGTTGAAAGTTATTAACGAGAAGCAAGAATCTAGGGTGCGTTACCATGAAACCAAAGTGCAGAACATTGTAATTGGTTATCTCATTTGGGGATGCTCCTTCTTCTTTGCTGTCTCTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTTGTTTTGGCTATGAATCTGTTGTGTGCCTTTGTCTACTTTTTGCTTTTTCTGGATGCTGTCACTATGTTATGTCGGACCCAGTACCAGCTAGACTTAATGTGCGAGGAATTAACTGAAGTTTGCCAACAAATTTTGGTAGTAAAAAACGAAGGTGATGGTTTAATAGAGGCTGGAGAATCTTGTGATGCATTTGATTTCAGTTTCCATGAGAAGATACTCATGCTTGATCCTTGTAGAATTGTTGGGAGGAAAGTTTACATGTACTTCACTGTCTGTGCTTTGCTTGCTGTTACTGCTATTGAATTATATGGTTGCAAGTATTTGTTGTGCAAC
Protein sequence
IVMELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGDGLIEAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLCN
Homology
BLAST of MS006237 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 238.0 bits (606), Expect = 6.0e-59
Identity = 126/176 (71.59%), Postives = 145/176 (82.39%), Query Frame = 0
Query: 3 MELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCND 62
M LGEL+R F ELK INEKQESRVRY+ETKVQNIV GYLI+ FFF +SQTSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 63 WWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGD-GL-I 122
WWV+LA++LLC+F+YFLLFLDAV ML RTQYQLD++C+EL E+ QQILV KN+ D GL +
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 123 EAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
E GES F+F FHEK+LMLD RIVGRKVY+YFTV ALLAVTAIELY KY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of MS006237 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 226.5 bits (576), Expect = 1.8e-55
Identity = 118/176 (67.05%), Postives = 141/176 (80.11%), Query Frame = 0
Query: 3 MELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCND 62
M +GEL+R FGELK INEKQESRVRYHE K Q IV GYLI FFF +SQTSS KC+D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSS-SKCHD 60
Query: 63 WWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGDG--LI 122
WWV+L+++LLC+FVYFLLFLDA T L +T+ QLD++C+EL EVCQQILV +N+ D +
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 123 EAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
E G+ D F+F FHEK+L+LD R VGRKVY+YFTVCAL+AVTAIELY KYLLCN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of MS006237 vs. NCBI nr
Match:
KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 223.0 bits (567), Expect = 2.0e-54
Identity = 116/176 (65.91%), Postives = 137/176 (77.84%), Query Frame = 0
Query: 1 IVMELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKC 60
IVM GELKR EL +NEKQE++V YH+ KVQNIV GYLIW FF+ +SQ SF KC
Sbjct: 34 IVMAHGELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQALSF-KC 93
Query: 61 NDWWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGD-GL 120
N+WWV+LA++LL F+YFLLFLDA+TML R QYQLD++C+EL E CQQ L+ KN D L
Sbjct: 94 NNWWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL 153
Query: 121 IEAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLC 176
+EAGESCD F+F FH+K+LMLD IVGR VY+YF VCALLAV AIELY KYLLC
Sbjct: 154 VEAGESCDRFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 208
BLAST of MS006237 vs. NCBI nr
Match:
KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52
Identity = 113/174 (64.94%), Postives = 134/174 (77.01%), Query Frame = 0
Query: 3 MELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCND 62
M GELKR F EL +NEKQE++V YH+ KVQNIV GYLIW F + +SQ SF KCN+
Sbjct: 1 MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSF-KCNN 60
Query: 63 WWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGD-GLIE 122
WWV+LA++LL F+YFLLFLDA+TML R QYQLD++C+EL E CQQ L+ KN D L+E
Sbjct: 61 WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVE 120
Query: 123 AGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLC 176
AGES D F+F FH+K+LMLD IVGR VY+YF VCALLAV AIELY KYLLC
Sbjct: 121 AGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 173
BLAST of MS006237 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 108/178 (60.67%), Postives = 135/178 (75.84%), Query Frame = 0
Query: 3 MELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQT-SSFLKCN 62
ME GELKRNF LK + EKQESRV+YHE++ QNI + YLIWG FFFA+SQT SS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGDGL-- 122
DWW+VL +++ CAFVYFL FL+AVTML R Q+Q+D++C+E E+CQQILV +++ D +
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 123 -IEAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
+EAG+S D F FSFH K+L RIV RK Y+ TV ALLAVTAIELY C +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of MS006237 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 238.0 bits (606), Expect = 2.9e-59
Identity = 126/176 (71.59%), Postives = 145/176 (82.39%), Query Frame = 0
Query: 3 MELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCND 62
M LGEL+R F ELK INEKQESRVRY+ETKVQNIV GYLI+ FFF +SQTSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 63 WWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGD-GL-I 122
WWV+LA++LLC+F+YFLLFLDAV ML RTQYQLD++C+EL E+ QQILV KN+ D GL +
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 123 EAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
E GES F+F FHEK+LMLD RIVGRKVY+YFTV ALLAVTAIELY KY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of MS006237 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 8.8e-56
Identity = 118/176 (67.05%), Postives = 141/176 (80.11%), Query Frame = 0
Query: 3 MELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCND 62
M +GEL+R FGELK INEKQESRVRYHE K Q IV GYLI FFF +SQTSS KC+D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSS-SKCHD 60
Query: 63 WWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGDG--LI 122
WWV+L+++LLC+FVYFLLFLDA T L +T+ QLD++C+EL EVCQQILV +N+ D +
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 123 EAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
E G+ D F+F FHEK+L+LD R VGRKVY+YFTVCAL+AVTAIELY KYLLCN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of MS006237 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 5.5e-50
Identity = 108/178 (60.67%), Postives = 135/178 (75.84%), Query Frame = 0
Query: 3 MELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQT-SSFLKCN 62
ME GELKRNF LK + EKQESRV+YHE++ QNI + YLIWG FFFA+SQT SS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGDGL-- 122
DWW+VL +++ CAFVYFL FL+AVTML R Q+Q+D++C+E E+CQQILV +++ D +
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 123 -IEAGESCDAFDFSFHEKILMLDPCRIVGRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
+EAG+S D F FSFH K+L RIV RK Y+ TV ALLAVTAIELY C +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of MS006237 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47
Identity = 107/180 (59.44%), Postives = 134/180 (74.44%), Query Frame = 0
Query: 1 IVMELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKC 60
I +LG+L+RNF LK IN+ QE+ +RY ETK+QN+V+GYL WG FFF VS + KC
Sbjct: 43 IHFQLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFS---FKC 102
Query: 61 NDWWVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEGD-GL 120
DWWV+LA+ L F YFLLF+DAV ML RT QLD++ +EL E+CQQILV +N+ + GL
Sbjct: 103 KDWWVILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGL 162
Query: 121 -IEAGESCDAFDFSFHEKILMLDPCRIV--GRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
+EAGE D F+ SFHE++ MLD R+V GRKVY+YF VC LLA+TAIELY CK LLCN
Sbjct: 163 SMEAGEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of MS006237 vs. ExPASy TrEMBL
Match:
A0A0A0KJZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 8.2e-46
Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 0
Query: 4 ELGELKRNFGELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDW 63
+LG+L++NF LK IN+ QE+ +RY ETK+QNIV+GYL WG FFF S + KC DW
Sbjct: 80 QLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFS---FKCKDW 139
Query: 64 WVVLAMNLLCAFVYFLLFLDAVTMLCRTQYQLDLMCEELTEVCQQILVVKNEG--DGLIE 123
WVVL++ LL F+Y LLF+DAV ML RT QL ++ +ELTE+CQQILV +N+ D +E
Sbjct: 140 WVVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSME 199
Query: 124 AGESCDAFDFSFHEKILMLDPCRIV--GRKVYMYFTVCALLAVTAIELYGCKYLLCN 177
GE CD F+ SFHE++ MLD +V GRK Y+YF VCALL +TAIELY CK LLCN
Sbjct: 200 GGECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 253
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157182.1 | 6.0e-59 | 71.59 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157176.1 | 1.8e-55 | 67.05 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
KAG7016840.1 | 2.0e-54 | 65.91 | hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6579338.1 | 2.5e-52 | 64.94 | hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022157130.1 | 1.1e-49 | 60.67 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSQ0 | 2.9e-59 | 71.59 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX74 | 8.8e-56 | 67.05 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DS87 | 5.5e-50 | 60.67 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TMJ1 | 1.2e-47 | 59.44 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A0A0KJZ3 | 8.2e-46 | 57.63 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |