MS006221 (gene) Bitter gourd (TR) v1

Overview


Name	MS006221
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ubiquitin-conjugating enzyme E2 protein
Location	scaffold96: 1301744 .. 1304148 (-)
RNA-Seq Expression	MS006221
Synteny	MS006221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATGGCGTCAAAGCGGATCTTGAAGGAACTCAAGGATTTGCAGAGGGATCCTCCCACGTCTTGCAGTGCTGGTATTTCGTTTCTCCGTCTCCTTTTGTTGTAGTGATCGAATGGTGTTGATTGGGATCGAATGGTGTTGTTTTGATCTGTCGTGCAATTTCGTTTTTTGCTGTTGGTTAGTCATTTGATTTGTGTAGACAATATGTTTTGAATTGCATGATGACTTGAATTAGGATGCTACTGATTTAGGGTTGTTTCTGTGTGATTTGGATGAGAAGCAGAACTACTTTTGAATTTCTTCATAATTCCTTTGGAATTAACGCATTTCCTTTGAGGCCTCATAGGTAAACTGCCTTTAGGAGAGTTTAATATAAATAAGGTTTTAAACCTCATTTTGGTCCCTAAACGTTCTAAATTTCTATTCAAGTCGTTAAGCTTTTATTTTAATTCCATTTTTGTCCTTTAAACCTTCAAATTGACTATTTCAGTCCCTAAACTTTTTTAAAATGACTATTTTGGTCACTGCCCTTATTTTCTTTTTAAAAAAATTGATAANTATATAAGCCACATAGGGTTGCTGAGGTGGGTATACGTGCAAATATTATGTGGAAAATAACAGCAATAACCAACATGATTATTTTTTTAAATAAGGTGTTCTAGCAAATGTCCTCAAAAGTTGTGTCATCCCTCGATTGTCAATTACATGTTTTCGTAAAAGTAAATAGCTTGTAACTGTATATCAAATGTGTTCAAGTTTTTCCTTCTTGATATGCTCCGGAACCGTCCCAGGCCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCTCCAGATAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTATTTCGTTTGTTCTTAAATTTTGATCCGGGTATTTTCTCTGCACTCTGATTCTCCTGCAGTCCTGCTCGTCAATTATTTGCATTCCAAGTGTATTTTGTTTTGATTTTAGCATCGAGCCTTTAGATCTCCCTATATATGCCAACCAAGGACCGATACTTATCTAATAAGATTGCATGTACGAACATTTGTATTGCCAACTTGTGTCTTAAGATGAATTGATGGGAGGCTGTAGACCTATTTATATAGTCTGGTTGTCTGGTTGGGACTTCATGCTATTTAGCTGAGACCTCAGACATGGTCTATGATCCATATAATGCTTCTCATTTTGAATCCTTTAAACACCTATAGAACTGTTTTCTGAATATACAATAACTATTATATATTCTTTCATCTCATATAACTAATGAATATGAATTTTTAGGTAGCATTCAGAACAAAGGTATTCCACCCAAATATAAACAGCAATGGAAGCATTTGCCTTGACATATTGAAAGAGCAGTGGAGCCCTGCCCTAACCATTTCTAAGGTTTGGTCCCCAAAAGCCATGAATTTCATTGAAGATCATAACAAATTATCATCTTGCATCACTTTTAACTTGTTACTTAATAACATTGCCTGCCTATATCCACGACATTCATTTTAAAATTCTCAATGTAATTGTACAGTACAACCAAATTGCTCGCATGAAAGTGAGCATGATTAATTATTATCTTATTGTCATGATGATCATTTTAATCAGATATGCCGTTGTAGTTCACTTGCATCTCCCAAGATCAATAGAAAGTTGGTAATTATAGTTACTTGTACTCTAAAATGTTTATCATTAAATTACAAGGAATTTGGTCCATGAACTTCTGGGGTTGTGTCTACAATCTAATAGGTCCCTTAAATTTAAGATGTGTTTAATAGGTTTCTAAACTTTCTATTCAGATTGGTTTCTTAACTTTAAAAGTGTTTATTAGTCTCTAACCTTTTAATTTTGTGATTTATTTTATTTTATTTTGTTTTTTATTTATTTATTTAGGGACCTTTAATGAATTTCCTCTCTCAATTTGCTAATCTTTCAATTTTGTGTCTAACAAATTCTTGAATTTTTTAAAATGTCTAATAGACAACAAAGTTTGAAGACTAAATTTGTAATTTAACCAAGGTTTATTTTAAGCATGTTCCTTTGATGAAGTTCTGTGCTCTCTATTCATCAATTAAATTTAGATCCCTGCTTTAGATTTAACTTAAATTTGGTCAAGTTCAACTTTATAAGTTGATTGCATTGTCCTGTAATTTAGATTGATGAATCTTTGGCTGTAAGTTTCTGTTGAATAACTTTTATTCATTTGTTCAGGTGTTGCTTTCAATCTGTTCTTTGTTGACGGATCCTAATCCCGATGACCCGTTGGTGCCGGAGATTGCTCACATGTACAAGACAGACAGGAACAAGTATGAAACAACTGCAAGGAGCTGGACCCAGAAGTATGCCATGGGG

mRNA sequence

CTCATGGCGTCAAAGCGGATCTTGAAGGAACTCAAGGATTTGCAGAGGGATCCTCCCACGTCTTGCAGTGCTGGCCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCTCCAGATAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTAGCATTCAGAACAAAGGTATTCCACCCAAATATAAACAGCAATGGAAGCATTTGCCTTGACATATTGAAAGAGCAGTGGAGCCCTGCCCTAACCATTTCTAAGGTGTTGCTTTCAATCTGTTCTTTGTTGACGGATCCTAATCCCGATGACCCGTTGGTGCCGGAGATTGCTCACATGTACAAGACAGACAGGAACAAGTATGAAACAACTGCAAGGAGCTGGACCCAGAAGTATGCCATGGGG

Coding sequence (CDS)

CTCATGGCGTCAAAGCGGATCTTGAAGGAACTCAAGGATTTGCAGAGGGATCCTCCCACGTCTTGCAGTGCTGGCCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCTCCAGATAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTAGCATTCAGAACAAAGGTATTCCACCCAAATATAAACAGCAATGGAAGCATTTGCCTTGACATATTGAAAGAGCAGTGGAGCCCTGCCCTAACCATTTCTAAGGTGTTGCTTTCAATCTGTTCTTTGTTGACGGATCCTAATCCCGATGACCCGTTGGTGCCGGAGATTGCTCACATGTACAAGACAGACAGGAACAAGTATGAAACAACTGCAAGGAGCTGGACCCAGAAGTATGCCATGGGG

Protein sequence

LMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG

Homology

[Close]

BLAST of MS006221 vs. NCBI nr
Match: KAG6605766.1 (Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 314.7 bits (805), Expect = 4.3e-82
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   LMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPD 60
           LMASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPD
Sbjct: 283 LMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPD 342

Query: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
           YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL
Sbjct: 343 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 402

Query: 121 VPEIAHMYKTDRNKYETTARSWTQKYAMG 150
           VPEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 403 VPEIAHMYKTDRNKYETTARSWTQKYAMG 431

[Close]

BLAST of MS006221 vs. NCBI nr
Match: XP_004145921.1 (ubiquitin-conjugating enzyme E2 10 [Cucumis sativus] >XP_008437569.1 PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Cucumis melo] >XP_022157170.1 ubiquitin-conjugating enzyme E2 10-like [Momordica charantia] >XP_022157171.1 ubiquitin-conjugating enzyme E2 10-like [Momordica charantia] >XP_022736231.1 ubiquitin-conjugating enzyme E2 10-like [Durio zibethinus] >XP_038876049.1 ubiquitin-conjugating enzyme E2 10 [Benincasa hispida] >XP_038876050.1 ubiquitin-conjugating enzyme E2 10 [Benincasa hispida] >KGN49886.1 hypothetical protein Csa_000350 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 5.6e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. NCBI nr
Match: TKS17383.1 (hypothetical protein D5086_0000014670 [Populus alba])

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-81
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 18  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 77

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 78  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 137

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 138 PEIAHMYKTDRNKYETTARSWTQKYAMG 165

[Close]

BLAST of MS006221 vs. NCBI nr
Match: KAF5451120.1 (hypothetical protein F2P56_031415, partial [Juglans regia])

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-81
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 52  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 111

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 112 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 171

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 172 PEIAHMYKTDRNKYETTARSWTQKYAMG 199

[Close]

BLAST of MS006221 vs. NCBI nr
Match: KAB5524173.1 (hypothetical protein DKX38_021922 [Salix brachista] >KAB5524196.1 hypothetical protein DKX38_021945 [Salix brachista])

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-81
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 15  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 74

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 75  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 134

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 135 PEIAHMYKTDRNKYETTARSWTQKYAMG 162

[Close]

BLAST of MS006221 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.6e-82
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-82
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDR KYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 4.5e-82
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTD+NKYE+TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 9.9e-82
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDR KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 6.4e-81
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVA +TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDR KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy TrEMBL
Match: A0A6J1DX68 (ubiquitin-conjugating enzyme E2 10-like OS=Momordica charantia OX=3673 GN=LOC111023950 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy TrEMBL
Match: A0A0A0KQ84 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139640 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy TrEMBL
Match: A0A1S3AUC5 (ubiquitin-conjugating enzyme E2 10-like OS=Cucumis melo OX=3656 GN=LOC103482944 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy TrEMBL
Match: A0A6P5Y8E3 (ubiquitin-conjugating enzyme E2 10-like OS=Durio zibethinus OX=66656 GN=LOC111289447 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. ExPASy TrEMBL
Match: A0A059CHQ6 (UBC core domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D01776 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.0e-82
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. TAIR 10
Match: AT5G53300.2 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. TAIR 10
Match: AT5G53300.4 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of MS006221 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 305.1 bits (780), Expect = 3.2e-83
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTD+NKYE+TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of MS006221 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 305.1 bits (780), Expect = 3.2e-83
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 2   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 61
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 122 PEIAHMYKTDRNKYETTARSWTQKYAMG 150
           PEIAHMYKTD+NKYE+TAR+WTQKYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

The following BLAST results are available for this feature:

BLAST of MS006221 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605766.1	4.3e-82	99.33	Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_004145921.1	5.6e-82	100.00	ubiquitin-conjugating enzyme E2 10 [Cucumis sativus] >XP_008437569.1 PREDICTED: ...	[more]
TKS17383.1	1.2e-81	99.32	hypothetical protein D5086_0000014670 [Populus alba]	[more]
KAF5451120.1	1.2e-81	99.32	hypothetical protein F2P56_031415, partial [Juglans regia]	[more]
KAB5524173.1	1.2e-81	99.32	hypothetical protein DKX38_021922 [Salix brachista] >KAB5524196.1 hypothetical p...	[more]

BLAST of MS006221 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35133	2.6e-82	96.62	Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1...	[more]
P35135	3.4e-82	97.30	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35132	4.5e-82	95.95	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
Q94F47	9.9e-82	95.95	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
Q8S919	6.4e-81	95.27	Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]

BLAST of MS006221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX68	2.7e-82	100.00	ubiquitin-conjugating enzyme E2 10-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0KQ84	2.7e-82	100.00	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139640 PE...	[more]
A0A1S3AUC5	2.7e-82	100.00	ubiquitin-conjugating enzyme E2 10-like OS=Cucumis melo OX=3656 GN=LOC103482944 ...	[more]
A0A6P5Y8E3	2.7e-82	100.00	ubiquitin-conjugating enzyme E2 10-like OS=Durio zibethinus OX=66656 GN=LOC11128...	[more]
A0A059CHQ6	6.0e-82	99.32	UBC core domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D01...	[more]

BLAST of MS006221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53300.1	1.9e-83	96.62	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.2	1.9e-83	96.62	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.4	1.9e-83	96.62	ubiquitin-conjugating enzyme 10	[more]
AT4G27960.1	3.2e-83	95.95	ubiquitin conjugating enzyme 9	[more]
AT4G27960.2	3.2e-83	95.95	ubiquitin conjugating enzyme 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 5..148 e-value: 2.3E-80 score: 283.0
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 4..146
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 4..146
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 6..142 e-value: 9.0E-54 score: 180.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 2..148 score: 61.412941
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 4..143 e-value: 1.56964E-75 score: 219.381
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..149 e-value: 8.5E-76 score: 255.0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 2..148
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 75..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006221.1	MS006221.1	mRNA