MS006111 (gene) Bitter gourd (TR) v1

Overview


Name	MS006111
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Serine/arginine repetitive matrix protein 1-like
Location	scaffold96: 129316 .. 130200 (-)
RNA-Seq Expression	MS006111
Synteny	MS006111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGCTGTGTCAGTACTGGTAGGACTTCTAATTCTGCTGCTCAGACTTCGAGATCTGGTTCTTCGCATTCCAAAATCAATGGCATTGGAAGCAGAGCACCCCCTCCACTGGAGGAGGAGTCTGTTAAGGAGGTTCTCTCTGAAACTCCCAAACCCAAACCCAAGCCGCCGCTGCCGGGTCTGCACGTTGGCTCTCCGGTAGGGGAGAGAAAAACAGAGAAATCGTGCTCCGGGAAAGTCAATGGGGGAGGAGATAGGATGGAGACGAAAATCCCCATTTACCCTGCTGAAGAAATTTCTGAGGTTTCCGACATTTGCAGCTTTAGTGAAACCCTGTCTACTACTACAATGACAGAGAAGATGATGGATGATTACGAAGAAATACGTCAGAGGATCTGTAGATCTCCGGCGAAATTGCCCAAAAACCGGTCGCTCTCCGACGACTGGGTTCCGAGGAGAGATAGACAGGTGGGGAAATCGCCATCGCGAAAATCCGATCAATCGCCCGGCCGGTTAATCGGCGGCGGTGTGGGAGCAGTGAAGTTGGTGCAAAGTAGAGACATGGGACAGAGCATCGCCAGGCGAAGTTTGAGGCCGGAGCCACGCCTGCCAAACAAGAGCGAGAATTCATGTCGGAGGTCCAGATCCCCTGCGACCACTCGGACCGACGGTGTAGCCTCCAGAACCGCCACTGGGCGGAGCCCGTCTGTCCGGAGGTCCGGAATGTCACCGGGGCGGGAAGCAACCACCGGAAGAGACTGTAACCGGAAAGAAACACCACAGGCTCAGGCTACACAATACGAGACTCCAGAGGGAAAATGGCGGACAACAAACGAGTCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTTCTC

mRNA sequence

ATGGGTTGCTGTGTCAGTACTGGTAGGACTTCTAATTCTGCTGCTCAGACTTCGAGATCTGGTTCTTCGCATTCCAAAATCAATGGCATTGGAAGCAGAGCACCCCCTCCACTGGAGGAGGAGTCTGTTAAGGAGGTTCTCTCTGAAACTCCCAAACCCAAACCCAAGCCGCCGCTGCCGGGTCTGCACGTTGGCTCTCCGGTAGGGGAGAGAAAAACAGAGAAATCGTGCTCCGGGAAAGTCAATGGGGGAGGAGATAGGATGGAGACGAAAATCCCCATTTACCCTGCTGAAGAAATTTCTGAGGTTTCCGACATTTGCAGCTTTAGTGAAACCCTGTCTACTACTACAATGACAGAGAAGATGATGGATGATTACGAAGAAATACGTCAGAGGATCTGTAGATCTCCGGCGAAATTGCCCAAAAACCGGTCGCTCTCCGACGACTGGGTTCCGAGGAGAGATAGACAGGTGGGGAAATCGCCATCGCGAAAATCCGATCAATCGCCCGGCCGGTTAATCGGCGGCGGTGTGGGAGCAGTGAAGTTGGTGCAAAGTAGAGACATGGGACAGAGCATCGCCAGGCGAAGTTTGAGGCCGGAGCCACGCCTGCCAAACAAGAGCGAGAATTCATGTCGGAGGTCCAGATCCCCTGCGACCACTCGGACCGACGGTGTAGCCTCCAGAACCGCCACTGGGCGGAGCCCGTCTGTCCGGAGGTCCGGAATGTCACCGGGGCGGGAAGCAACCACCGGAAGAGACTGTAACCGGAAAGAAACACCACAGGCTCAGGCTACACAATACGAGACTCCAGAGGGAAAATGGCGGACAACAAACGAGTCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTTCTC

Coding sequence (CDS)

ATGGGTTGCTGTGTCAGTACTGGTAGGACTTCTAATTCTGCTGCTCAGACTTCGAGATCTGGTTCTTCGCATTCCAAAATCAATGGCATTGGAAGCAGAGCACCCCCTCCACTGGAGGAGGAGTCTGTTAAGGAGGTTCTCTCTGAAACTCCCAAACCCAAACCCAAGCCGCCGCTGCCGGGTCTGCACGTTGGCTCTCCGGTAGGGGAGAGAAAAACAGAGAAATCGTGCTCCGGGAAAGTCAATGGGGGAGGAGATAGGATGGAGACGAAAATCCCCATTTACCCTGCTGAAGAAATTTCTGAGGTTTCCGACATTTGCAGCTTTAGTGAAACCCTGTCTACTACTACAATGACAGAGAAGATGATGGATGATTACGAAGAAATACGTCAGAGGATCTGTAGATCTCCGGCGAAATTGCCCAAAAACCGGTCGCTCTCCGACGACTGGGTTCCGAGGAGAGATAGACAGGTGGGGAAATCGCCATCGCGAAAATCCGATCAATCGCCCGGCCGGTTAATCGGCGGCGGTGTGGGAGCAGTGAAGTTGGTGCAAAGTAGAGACATGGGACAGAGCATCGCCAGGCGAAGTTTGAGGCCGGAGCCACGCCTGCCAAACAAGAGCGAGAATTCATGTCGGAGGTCCAGATCCCCTGCGACCACTCGGACCGACGGTGTAGCCTCCAGAACCGCCACTGGGCGGAGCCCGTCTGTCCGGAGGTCCGGAATGTCACCGGGGCGGGAAGCAACCACCGGAAGAGACTGTAACCGGAAAGAAACACCACAGGCTCAGGCTACACAATACGAGACTCCAGAGGGAAAATGGCGGACAACAAACGAGTCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTTCTC

Protein sequence

MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTMTEKMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGVGAVKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSVRRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL

Homology

[Close]

BLAST of MS006111 vs. NCBI nr
Match: XP_022139888.1 (uncharacterized protein LOC111010693 [Momordica charantia])

HSP 1 Score: 566.2 bits (1458), Expect = 1.6e-157
Identity = 293/295 (99.32%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLP 60
           MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLP
Sbjct: 1   MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLP 60

Query: 61  GLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTMTE 120
           GLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTMTE
Sbjct: 61  GLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTMTE 120

Query: 121 KMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGVGA 180
           KMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGVGA
Sbjct: 121 KMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGVGA 180

Query: 181 VKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSVRR 240
           VKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSVRR
Sbjct: 181 VKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSVRR 240

Query: 241 SGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           SGMSPGREATTGRDCNRKE P AQATQYETPEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 SGMSPGREATTGRDCNRKEAPPAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 295

[Close]

BLAST of MS006111 vs. NCBI nr
Match: XP_038895057.1 (uncharacterized protein LOC120083387 [Benincasa hispida] >XP_038895058.1 uncharacterized protein LOC120083387 [Benincasa hispida])

HSP 1 Score: 377.5 bits (968), Expect = 1.1e-100
Identity = 214/297 (72.05%), Postives = 237/297 (79.80%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQT--SRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVST R SNS++    SRS  SH K+N +G+RAPPPLEEESVKEVLSETPKP+P   
Sbjct: 1   MGCCVSTTRASNSSSSPHHSRSTYSHPKLNRVGNRAPPPLEEESVKEVLSETPKPRP--- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                  +P+GER  ++S SGKVNG       +I I+P EEISEVSD+CSFSETLSTTT+
Sbjct: 61  -------TPIGERNPDESASGKVNG-------RIHIHPTEEISEVSDVCSFSETLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGV 180
           TEK +DD+EEIRQRICRSPAKL KNRS SDDWVPRRDR VGKSP+RKSDQSP RL  GG 
Sbjct: 121 TEK-LDDFEEIRQRICRSPAKLAKNRSPSDDWVPRRDRMVGKSPTRKSDQSPSRL-NGGA 180

Query: 181 GAVKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSV 240
           G VKLVQSRDMGQ + RRS RPEP L N++EN+ RRSRSPA TRTD  ASRTA GRSPSV
Sbjct: 181 GTVKLVQSRDMGQGLTRRSPRPEPHLQNRTENAYRRSRSPAYTRTDSGASRTAAGRSPSV 240

Query: 241 RRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           RRSGMSPGREAT GRD  RKE  Q+QA +  T EGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 RRSGMSPGREATAGRDYYRKEAGQSQAIENATIEGKWRTTNESLDNPLVSLECFIFL 278

[Close]

BLAST of MS006111 vs. NCBI nr
Match: XP_023001643.1 (uncharacterized protein LOC111495715 [Cucurbita maxima])

HSP 1 Score: 372.9 bits (956), Expect = 2.6e-99
Identity = 218/299 (72.91%), Postives = 239/299 (79.93%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGS--SHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVST RTSNS++    SGS  SHSK N IG+RAPPPLEEESVKEVLSETPKPKP   
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSNHIGNRAPPPLEEESVKEVLSETPKPKP--- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                   P+G RK  +S SG +NGG       IPI+  EEISE+SD+CSF+E+LSTTT+
Sbjct: 61  -------PPIGGRKLHESASGNLNGG-------IPIHSTEEISEISDVCSFNESLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNR-SLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGG 180
           TEK +DD+EEIR+RICRSPAKLPKNR SLSDDWV RRDR VGKSP+RK DQSPGR I  G
Sbjct: 121 TEK-LDDFEEIRKRICRSPAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGR-INSG 180

Query: 181 VGAVKLVQSRDMGQS-IARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSP 240
            G VKLVQSRDMGQ  +A RSLRPEPR+ N++ENS RRSRSPATTRTDG ASRTA GRSP
Sbjct: 181 AGTVKLVQSRDMGQGLLASRSLRPEPRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSP 240

Query: 241 SVRRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           SVRRSGMSPGREATTG D  RKET +  A Q ET EGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 SVRRSGMSPGREATTGGDYYRKETGEVHA-QNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of MS006111 vs. NCBI nr
Match: XP_023542734.1 (uncharacterized protein LOC111802557 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 1.0e-98
Identity = 216/297 (72.73%), Postives = 237/297 (79.80%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAA--QTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVS+ R+SNS++    S SGSS+ K   IG+RAPPPLEEESVKEVLSETPKPK    
Sbjct: 1   MGCCVSSSRSSNSSSPPHHSGSGSSYPKPTAIGNRAPPPLEEESVKEVLSETPKPK---- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                  S  GERKT +S SG++NGG       IPI+P EEISEVSD+CSFSETLSTTT+
Sbjct: 61  -------SSFGERKTGESFSGRINGG-------IPIHPTEEISEVSDVCSFSETLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGV 180
           TEK +DDYEEIRQRI RSPAKLPK+R  SDDWV  RDRQVGKSP+RKS+QSPGR+ G   
Sbjct: 121 TEK-VDDYEEIRQRISRSPAKLPKSRPNSDDWVLGRDRQVGKSPTRKSNQSPGRING--- 180

Query: 181 GAVKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSV 240
           G VKLVQSRDM Q ++RRSLRPEPRL N +ENS RRSRSPATTR D VASRTA GRSPSV
Sbjct: 181 GTVKLVQSRDMAQGLSRRSLRPEPRLHNSTENSYRRSRSPATTRIDSVASRTAAGRSPSV 240

Query: 241 RRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           RRSGMSPGREAT GRD +RKET QAQ  Q ET EGKW TTNESLDNPLVSLECFIFL
Sbjct: 241 RRSGMSPGREATGGRDYSRKETGQAQPAQNETIEGKWPTTNESLDNPLVSLECFIFL 275

[Close]

BLAST of MS006111 vs. NCBI nr
Match: XP_022994446.1 (uncharacterized protein LOC111490165 [Cucurbita maxima])

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-97
Identity = 215/297 (72.39%), Postives = 235/297 (79.12%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGS--SHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVS+ R+SNS++    SGS  S+ K   IG+RAPPPLEEESVKEVLSETPKPK    
Sbjct: 1   MGCCVSSSRSSNSSSPPHHSGSGCSYPKPTAIGNRAPPPLEEESVKEVLSETPKPK---- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                  S  GERKT +S SG++NGG       IPI+P EEISEVSD+CSFSETLSTTT+
Sbjct: 61  -------SSFGERKTGESFSGRINGG-------IPIHPTEEISEVSDVCSFSETLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGV 180
           TEK +DDYEEIRQRI RSPAKLPK+R  SDDWV  RDRQVGKSP+RKS+QSPGR+ G   
Sbjct: 121 TEK-VDDYEEIRQRISRSPAKLPKSRPNSDDWVLGRDRQVGKSPTRKSNQSPGRING--- 180

Query: 181 GAVKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSV 240
           G VKLVQSRDM Q ++RRSLRPEPRL N +ENS RRSRSPATTR D VASRTA GRSPSV
Sbjct: 181 GTVKLVQSRDMVQGLSRRSLRPEPRLHNSTENSYRRSRSPATTRIDSVASRTAAGRSPSV 240

Query: 241 RRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           RRSGMSPGREAT GRD  RKET QAQ  Q ET EGKW TTNESLDNPLVSLECFIFL
Sbjct: 241 RRSGMSPGREATGGRDYYRKETGQAQPPQNETIEGKWPTTNESLDNPLVSLECFIFL 275

[Close]

BLAST of MS006111 vs. ExPASy TrEMBL
Match: A0A6J1CGR2 (uncharacterized protein LOC111010693 OS=Momordica charantia OX=3673 GN=LOC111010693 PE=4 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 7.8e-158
Identity = 293/295 (99.32%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLP 60
           MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLP
Sbjct: 1   MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLP 60

Query: 61  GLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTMTE 120
           GLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTMTE
Sbjct: 61  GLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTMTE 120

Query: 121 KMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGVGA 180
           KMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGVGA
Sbjct: 121 KMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGVGA 180

Query: 181 VKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSVRR 240
           VKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSVRR
Sbjct: 181 VKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSVRR 240

Query: 241 SGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           SGMSPGREATTGRDCNRKE P AQATQYETPEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 SGMSPGREATTGRDCNRKEAPPAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 295

[Close]

BLAST of MS006111 vs. ExPASy TrEMBL
Match: A0A6J1KR40 (uncharacterized protein LOC111495715 OS=Cucurbita maxima OX=3661 GN=LOC111495715 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.3e-99
Identity = 218/299 (72.91%), Postives = 239/299 (79.93%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGS--SHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVST RTSNS++    SGS  SHSK N IG+RAPPPLEEESVKEVLSETPKPKP   
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSNHIGNRAPPPLEEESVKEVLSETPKPKP--- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                   P+G RK  +S SG +NGG       IPI+  EEISE+SD+CSF+E+LSTTT+
Sbjct: 61  -------PPIGGRKLHESASGNLNGG-------IPIHSTEEISEISDVCSFNESLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNR-SLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGG 180
           TEK +DD+EEIR+RICRSPAKLPKNR SLSDDWV RRDR VGKSP+RK DQSPGR I  G
Sbjct: 121 TEK-LDDFEEIRKRICRSPAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGR-INSG 180

Query: 181 VGAVKLVQSRDMGQS-IARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSP 240
            G VKLVQSRDMGQ  +A RSLRPEPR+ N++ENS RRSRSPATTRTDG ASRTA GRSP
Sbjct: 181 AGTVKLVQSRDMGQGLLASRSLRPEPRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSP 240

Query: 241 SVRRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           SVRRSGMSPGREATTG D  RKET +  A Q ET EGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 SVRRSGMSPGREATTGGDYYRKETGEVHA-QNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of MS006111 vs. ExPASy TrEMBL
Match: A0A6J1JZ58 (uncharacterized protein LOC111490165 OS=Cucurbita maxima OX=3661 GN=LOC111490165 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 7.0e-98
Identity = 215/297 (72.39%), Postives = 235/297 (79.12%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGS--SHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVS+ R+SNS++    SGS  S+ K   IG+RAPPPLEEESVKEVLSETPKPK    
Sbjct: 1   MGCCVSSSRSSNSSSPPHHSGSGCSYPKPTAIGNRAPPPLEEESVKEVLSETPKPK---- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                  S  GERKT +S SG++NGG       IPI+P EEISEVSD+CSFSETLSTTT+
Sbjct: 61  -------SSFGERKTGESFSGRINGG-------IPIHPTEEISEVSDVCSFSETLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGV 180
           TEK +DDYEEIRQRI RSPAKLPK+R  SDDWV  RDRQVGKSP+RKS+QSPGR+ G   
Sbjct: 121 TEK-VDDYEEIRQRISRSPAKLPKSRPNSDDWVLGRDRQVGKSPTRKSNQSPGRING--- 180

Query: 181 GAVKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSV 240
           G VKLVQSRDM Q ++RRSLRPEPRL N +ENS RRSRSPATTR D VASRTA GRSPSV
Sbjct: 181 GTVKLVQSRDMVQGLSRRSLRPEPRLHNSTENSYRRSRSPATTRIDSVASRTAAGRSPSV 240

Query: 241 RRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           RRSGMSPGREAT GRD  RKET QAQ  Q ET EGKW TTNESLDNPLVSLECFIFL
Sbjct: 241 RRSGMSPGREATGGRDYYRKETGQAQPPQNETIEGKWPTTNESLDNPLVSLECFIFL 275

[Close]

BLAST of MS006111 vs. ExPASy TrEMBL
Match: A0A6J1EN02 (uncharacterized protein LOC111434064 OS=Cucurbita moschata OX=3662 GN=LOC111434064 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.2e-97
Identity = 215/299 (71.91%), Postives = 237/299 (79.26%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGS--SHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVST RTSNS++    SGS  SHSK + IG+RAPPPLEEESVKEVLSETPKPKP   
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKP--- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                   P+G RK  +S SG +NGG       IPI+  EEISE+SD+CSF+E+LSTTT+
Sbjct: 61  -------PPIGGRKLHESASGNLNGG-------IPIHSTEEISEISDVCSFNESLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNR-SLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGG 180
           TEK +DD+EEIR+RICRSPAKLPKNR SLSDDWV RRDR VGKSP+RK DQSPGR I  G
Sbjct: 121 TEK-LDDFEEIRKRICRSPAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGR-INSG 180

Query: 181 VGAVKLVQSRDMGQS-IARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSP 240
            G VKLVQSRDMGQ  +A RSLRPE R+ N++ENS RRSRSPATTRTDG ASRT  GRSP
Sbjct: 181 AGTVKLVQSRDMGQGLLASRSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTTAGRSP 240

Query: 241 SVRRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           SVRRSGMSPGREATTG D  RKET +  A Q ET EGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 SVRRSGMSPGREATTGGDYYRKETGEVHA-QNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of MS006111 vs. ExPASy TrEMBL
Match: A0A6J1GRS3 (uncharacterized protein LOC111456914 OS=Cucurbita moschata OX=3662 GN=LOC111456914 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.5e-97
Identity = 213/297 (71.72%), Postives = 234/297 (78.79%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGS--SHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPP 60
           MGCCVS+ R+SNS++    SGS  S+ K   IG+RAPPPLEEESVKEVLSETPKPK    
Sbjct: 1   MGCCVSSSRSSNSSSPPHHSGSGCSYPKPTAIGNRAPPPLEEESVKEVLSETPKPK---- 60

Query: 61  LPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSETLSTTTM 120
                  S  GERKT +S SG++NGG       IPI+P EEISEVSD+CSFSETLSTTT+
Sbjct: 61  -------SSFGERKTGESFSGRINGG-------IPIHPTEEISEVSDVCSFSETLSTTTV 120

Query: 121 TEKMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSPGRLIGGGV 180
           TEK +DDYEEIRQRI RSPAKLPK+R  SDDWV  RDRQVGKSP+RKS+QSPGR+ G   
Sbjct: 121 TEK-VDDYEEIRQRISRSPAKLPKSRPNSDDWVLGRDRQVGKSPTRKSNQSPGRING--- 180

Query: 181 GAVKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRSPSV 240
           G VKLVQSRDM Q ++RRSLRPEPRL N +ENS RRSRSPATTR D VASRTA GRSPSV
Sbjct: 181 GTVKLVQSRDMAQGLSRRSLRPEPRLHNSTENSYRRSRSPATTRIDSVASRTAAGRSPSV 240

Query: 241 RRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
           RRSGMSPGREAT GRD +RKET  AQ  Q E  EGKW TTNESLDNPLVSLECFIFL
Sbjct: 241 RRSGMSPGREATGGRDYSRKETGLAQPAQNEMIEGKWPTTNESLDNPLVSLECFIFL 275

[Close]

BLAST of MS006111 vs. TAIR 10
Match: AT1G61170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-10
Identity = 89/300 (29.67%), Postives = 127/300 (42.33%), Query Frame = 0


Query: 3   CCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSETPKPKPKPPLPGL 62
           CCVS+G T       S   ++  +            EE  VKEVLSET    P       
Sbjct: 4   CCVSSGTTDRENENVSDKNTTIVE------------EETVVKEVLSETTLFTPSSSFRTS 63

Query: 63  HVGSPVGE--RKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDIC--SFSETLSTTTM 122
               PV    R+ E+   G +    D +  +      EE SEVS+IC  S SE++S+T +
Sbjct: 64  TFKDPVKTKIREDEEKKPGFLKMASDPVLIRPGSVDPEEGSEVSEICSLSLSESVSSTVV 123

Query: 123 TEKMMDDYEEIRQRIC-RSPAKLPKNRSLSDDWVPRRDRQVGKS-PSRKSDQSPGRLIGG 182
                +++  ++QR   RSPAK              R +  G + P+R++DQSP +   G
Sbjct: 124 MNGYDEEHVMMKQRKSQRSPAK-------------TRTQVTGNNYPTRRTDQSPRKRNNG 183

Query: 183 GVGAVKLVQS-RDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRTDGVASRTATGRS 242
                +     RD G                  E S RRSRSPAT R+   +++++    
Sbjct: 184 TCNGARYGSGVRDPG------------------ERSGRRSRSPATNRSVMDSNQSSRVGG 243

Query: 243 PSVRRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVSLECFIFL 296
              R++  SPGR          +  P       +  +    TT E L+NPLVSLECFIFL
Sbjct: 244 AKTRKNNQSPGRV---------RLDPAKNGLDQQQHQNYGYTTEELLENPLVSLECFIFL 251

[Close]

BLAST of MS006111 vs. TAIR 10
Match: AT1G11125.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). )

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-09
Identity = 95/319 (29.78%), Postives = 139/319 (43.57%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPL--EEESVKEVLSETPKPKPKPP 60
           MGCC+S          ++ +      ++G  +  PP +  EE  VKEVLSET        
Sbjct: 1   MGCCLS----------SATADKKDDPVSGKNTARPPSVIDEETVVKEVLSETTL------ 60

Query: 61  LPGLHVGSPVG-------ERKTEKSCSGKVNGGGDRMETKIPIYPAEEISEVSDICSFSE 120
           L   +  S V        + + EK     V+   + + TK  +   E+ SEVS+ CS SE
Sbjct: 61  LTSSNDNSTVEKTTLTKIQEEEEKKPGIVVDVAQEPVLTKPSLVEPEKGSEVSENCSLSE 120

Query: 121 TLSTTTMTEKMMDDYEEIRQRIC-----RSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKS 180
           +L   ++  K   D EE++Q        RSPAK              R+R +   P+R++
Sbjct: 121 SL--LSIVNKY--DEEEVKQMKSHVVRQRSPAK-------------SRNRVMVSYPNRRT 180

Query: 181 DQSP-GRLIGGGVGAVKLVQSRDMGQSIARRSLRPEPRLPNKSENSCRRSRSPATTRT-- 240
           D SP  R      G+V+LV S    +              + +E S RRSRSPA  R+  
Sbjct: 181 DMSPRKRNNEEEAGSVRLVPSATGTR--------------DSTERSERRSRSPAMNRSVM 240

Query: 241 -DGVASRTATGRSPSVRRSGMSPGREAT------TGRDCNRKETPQAQATQYETPEGKWR 296
                S+ +T    ++RR   SPGR         + ++CN  + P +       P     
Sbjct: 241 MGPTRSQQSTDSCGAMRRQSQSPGRVRLNPNMNGSDQECNHHKWPGSIGNYNSAP----- 265

[Close]

BLAST of MS006111 vs. TAIR 10
Match: AT4G28180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 1508 Blast hits to 1315 proteins in 223 species: Archae - 4; Bacteria - 127; Metazoa - 687; Fungi - 310; Plants - 142; Viruses - 28; Other Eukaryotes - 210 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 93/307 (30.29%), Postives = 133/307 (43.32%), Query Frame = 0


Query: 1   MGCCVSTGRTSNSAAQTSRSGSSHSKINGIGSRAPPPLEEESVKEVLSET-----PKPKP 60
           MGCC S G+ +                    ++ PPPLEEESVKEV+ ++     P P  
Sbjct: 1   MGCCFSAGKVTAPPV--------------AAAQIPPPLEEESVKEVVVQSVSVSVPIPIS 60

Query: 61  KP-PLPGLHVGSPVGERKTEKSCSGKVNGGGDRMETKIPI---YPAEEIS-EVSDICSFS 120
            P P+P L   +P                     E ++P+    PA EIS   SDICS S
Sbjct: 61  VPVPVPDLVPSAPTVSDS----------------EAQVPLPLSPPAPEISHSKSDICSVS 120

Query: 121 ETLSTTTMTEKMMDDYEEIRQRICRSPAKLPKNRSLSDDWVPRRDRQVGKSPSRKSDQSP 180
            + S +T T         I +    S    P   S S     R DR +     R S Q  
Sbjct: 121 VSHSYSTATTATA---ASILEDDALSKPHRPPPPSSSTSRRNRPDRVLRSPAERHSPQ-- 180

Query: 181 GRLIGGGVGAVKLVQSRDMGQSIARRSLRPEPRLPNK--SENSCRRSRSPATTRTDGVAS 240
           G+ +   +  V+  QSR    +  RR++   P LP    S+N  RRS+SPAT       +
Sbjct: 181 GKQLRPRL--VRERQSRQPNPTHNRRNVDSGP-LPRSGLSDNPRRRSQSPAT------RA 240

Query: 241 RTATGRSPSVRRSGMSPGREATTGRDCNRKETPQAQATQYETPEGKWRTTNESLDNPLVS 296
            ++  RSP  +R G +P ++  T  +  +KE    + T+  T E K      ++ +P VS
Sbjct: 241 PSSARRSPMKKRVG-APEKDGAT--EVKKKE----EETEKVTAEVKKEEDVTAVRDPEVS 256

The following BLAST results are available for this feature:

BLAST of MS006111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139888.1	1.6e-157	99.32	uncharacterized protein LOC111010693 [Momordica charantia]	[more]
XP_038895057.1	1.1e-100	72.05	uncharacterized protein LOC120083387 [Benincasa hispida] >XP_038895058.1 unchara...	[more]
XP_023001643.1	2.6e-99	72.91	uncharacterized protein LOC111495715 [Cucurbita maxima]	[more]
XP_023542734.1	1.0e-98	72.73	uncharacterized protein LOC111802557 [Cucurbita pepo subsp. pepo]	[more]
XP_022994446.1	1.4e-97	72.39	uncharacterized protein LOC111490165 [Cucurbita maxima]	[more]

BLAST of MS006111 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS006111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGR2	7.8e-158	99.32	uncharacterized protein LOC111010693 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1KR40	1.3e-99	72.91	uncharacterized protein LOC111495715 OS=Cucurbita maxima OX=3661 GN=LOC111495715...	[more]
A0A6J1JZ58	7.0e-98	72.39	uncharacterized protein LOC111490165 OS=Cucurbita maxima OX=3661 GN=LOC111490165...	[more]
A0A6J1EN02	1.2e-97	71.91	uncharacterized protein LOC111434064 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1GRS3	3.5e-97	71.72	uncharacterized protein LOC111456914 OS=Cucurbita moschata OX=3662 GN=LOC1114569...	[more]

BLAST of MS006111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61170.1	2.4e-10	29.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G11125.1	1.6e-09	29.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28180.1	1.8e-05	30.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90
None	No IPR available	PANTHER	PTHR33871	OS05G0503100 PROTEIN-RELATED	coord: 1..295
None	No IPR available	PANTHER	PTHR33871:SF1	OS05G0503100 PROTEIN	coord: 1..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006111.1	MS006111.1	mRNA