MS006021 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGAAGCGGCGAAGTTGAATGCGGCCAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATATCTCAGCCTGCAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAGAGCTCTCTCCAACATCCCCATTCGGAGCCCTCAACAATTCCCGAAGACGCCATTTCAAAGCGCCATGAT ATGAAGGAAGCGGCGAAGTTGAATGCGGCCAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATATCTCAGCCTGCAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAGAGCTCTCTCCAACATCCCCATTCGGAGCCCTCAACAATTCCCGAAGACGCCATTTCAAAGCGCCATGAT ATGAAGGAAGCGGCGAAGTTGAATGCGGCCAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATATCTCAGCCTGCAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAGAGCTCTCTCCAACATCCCCATTCGGAGCCCTCAACAATTCCCGAAGACGCCATTTCAAAGCGCCATGAT MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAISKRHD Homology
BLAST of MS006021 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19 Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of MS006021 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19 Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of MS006021 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 4.8e-19 Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of MS006021 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 93.6 bits (231), Expect = 6.5e-16 Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0
BLAST of MS006021 vs. NCBI nr
Match: XP_042939644.1 (outer envelope membrane protein 7 [Carya illinoinensis] >KAG2727424.1 hypothetical protein I3760_01G157400 [Carya illinoinensis] >KAG6668308.1 hypothetical protein CIPAW_01G161200 [Carya illinoinensis] >KAG6732085.1 hypothetical protein I3842_01G159800 [Carya illinoinensis] >KAG7996299.1 hypothetical protein I3843_01G152500 [Carya illinoinensis]) HSP 1 Score: 67.0 bits (162), Expect = 6.5e-08 Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 0
BLAST of MS006021 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.3e-19 Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of MS006021 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16 Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0
BLAST of MS006021 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-08 Identity = 31/51 (60.78%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MS006021 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.1e-08 Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of MS006021 vs. ExPASy TrEMBL
Match: A0A1U7Y866 (uncharacterized protein LOC104242143 OS=Nicotiana sylvestris OX=4096 GN=LOC104242143 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.5e-07 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of MS006021 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 4.5e-07 Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of MS006021 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 ) HSP 1 Score: 41.6 bits (96), Expect = 2.7e-04 Identity = 19/50 (38.00%), Postives = 35/50 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|