MS005928 (gene) Bitter gourd (TR) v1

Overview
NameMS005928
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBone morphogenetic protein like
Locationscaffold254: 2484131 .. 2484427 (-)
RNA-Seq ExpressionMS005928
SyntenyMS005928
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGAGGTGGGTTTGGAAATGGAGTCAGGAACGAAGGAAGAAGATGAGAGAGAAGCTGGGAAGATGAAGAAGAAGAGTTGTTACAAGCAGGTGGGAAGTTGGGTTTCAATGGCGGTGGCAAGCATGGTGGGAGGGCTTGTTTTTGGGTGGTGGGAGATTCAGTTTCATGGAGAAAACAGGCAACTGTGGATGGTACCTTTTAGTCTTGTTTTGATGATTGCTCCCATCTTTGTAATGATGTCTGTTTTCATCTCTAGTTTCTGCACTGCTTCCATGGATCACAGCACTGCTTCTGCT

mRNA sequence

CAGGAGGTGGGTTTGGAAATGGAGTCAGGAACGAAGGAAGAAGATGAGAGAGAAGCTGGGAAGATGAAGAAGAAGAGTTGTTACAAGCAGGTGGGAAGTTGGGTTTCAATGGCGGTGGCAAGCATGGTGGGAGGGCTTGTTTTTGGGTGGTGGGAGATTCAGTTTCATGGAGAAAACAGGCAACTGTGGATGGTACCTTTTAGTCTTGTTTTGATGATTGCTCCCATCTTTGTAATGATGTCTGTTTTCATCTCTAGTTTCTGCACTGCTTCCATGGATCACAGCACTGCTTCTGCT

Coding sequence (CDS)

CAGGAGGTGGGTTTGGAAATGGAGTCAGGAACGAAGGAAGAAGATGAGAGAGAAGCTGGGAAGATGAAGAAGAAGAGTTGTTACAAGCAGGTGGGAAGTTGGGTTTCAATGGCGGTGGCAAGCATGGTGGGAGGGCTTGTTTTTGGGTGGTGGGAGATTCAGTTTCATGGAGAAAACAGGCAACTGTGGATGGTACCTTTTAGTCTTGTTTTGATGATTGCTCCCATCTTTGTAATGATGTCTGTTTTCATCTCTAGTTTCTGCACTGCTTCCATGGATCACAGCACTGCTTCTGCT

Protein sequence

QEVGLEMESGTKEEDEREAGKMKKKSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQLWMVPFSLVLMIAPIFVMMSVFISSFCTASMDHSTASA
Homology
BLAST of MS005928 vs. NCBI nr
Match: KGN56384.1 (hypothetical protein Csa_011278 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 2.4e-20
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query: 1   QEVGLEMESGTKEEDEREAGKMKKKSCYKQVGSWV-SMAVASMVGGLVFGWWEIQFHGEN 60
           +E G  MES  KEED  +      KSC  ++ +WV SM VA + GGLVFGWW  QFH  N
Sbjct: 13  EEAGFPMESAMKEEDRDKKRNGNMKSC--KIATWVISMVVACLTGGLVFGWWVFQFHPTN 72

Query: 61  RQLWMVPFSLVLMIAPIFVMMSVFISSFCTASMDHSTASA 100
           RQLWMVPFSLVLMIAPIFVMMS+ IS+FC  SMD +T SA
Sbjct: 73  RQLWMVPFSLVLMIAPIFVMMSLLISAFCN-SMDQTTTSA 109

BLAST of MS005928 vs. NCBI nr
Match: KAG6582696.1 (hypothetical protein SDJN03_22698, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.8 bits (216), Expect = 5.7e-14
Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 0

Query: 1  QEVGLEMESGTKEEDEREAGKMKKKSCYKQVGSW-VSMAVASMVGGLVFGWWEIQFHGEN 60
          +E G  MES  KE           KSC  ++ +W VSMAV SMVGG+VFGWWE +FH  N
Sbjct: 13 EEAGQPMESAMKE---------NMKSC--KMATWVVSMAVTSMVGGVVFGWWEFRFHPTN 72

Query: 61 RQLWMVPFSLVLMIAPIFVMMSVFISSF 88
          RQLWMVPF L+LM  P+FV+MS+ IS+F
Sbjct: 73 RQLWMVPFGLILMTTPMFVIMSLLISAF 89

BLAST of MS005928 vs. NCBI nr
Match: KGN56386.1 (hypothetical protein Csa_010779 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-11
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 0

Query: 2  EVGLEMESGTKEEDEREAGKMKKKSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQ 61
          +VG+E+E   K E E++  K +K    K V   V + + S+ G  + GWW ++FH   +Q
Sbjct: 2  QVGIEIEDVMKGEGEQKKQKNRK---LKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQ 61

Query: 62 LWMVPFSLVLMIAPIFVMMSVFISSFCTASMD 94
           WMVPFSLVLMIAPIFV++SV ISSFC  SMD
Sbjct: 62 QWMVPFSLVLMIAPIFVLISVSISSFCN-SMD 89

BLAST of MS005928 vs. NCBI nr
Match: KAA0048855.1 (putative permease/transmembrane protein [Cucumis melo var. makuwa] >TYK20807.1 putative permease/transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-11
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 0

Query: 2  EVGLEMESGTKEEDEREAGKMKKKSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQ 61
          +VG E+E   K E E++  K +K    K V   V + + S+ G  + GWW ++FH   +Q
Sbjct: 2  QVGTEIEDVMKGEGEQKKQKNRK---LKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQ 61

Query: 62 LWMVPFSLVLMIAPIFVMMSVFISSFCTASMD 94
           WMVPFSLVLMIAPIFV++SV ISSFC  SMD
Sbjct: 62 QWMVPFSLVLMIAPIFVLISVSISSFCN-SMD 89

BLAST of MS005928 vs. NCBI nr
Match: KAF3973370.1 (hypothetical protein CMV_003195 [Castanea mollissima])

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-10
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 0

Query: 12 KEEDEREAGKMKK--KSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQLWMVPFSL 71
          KE  E   G+ K+  KSC   V SW  M   SM+GGL+ GWWE ++H  NRQLWMVPF L
Sbjct: 5  KEGKEESHGERKERVKSCI--VYSWSLM--VSMIGGLIMGWWEYEYHRTNRQLWMVPFGL 64

Query: 72 VLMIAPIFVMMSVFISSFCTA 91
          VL+I P FV  S+F+S +C++
Sbjct: 65 VLLITPPFVWFSIFVSDWCSS 81

BLAST of MS005928 vs. ExPASy TrEMBL
Match: A0A0A0L5S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118200 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query: 1   QEVGLEMESGTKEEDEREAGKMKKKSCYKQVGSWV-SMAVASMVGGLVFGWWEIQFHGEN 60
           +E G  MES  KEED  +      KSC  ++ +WV SM VA + GGLVFGWW  QFH  N
Sbjct: 13  EEAGFPMESAMKEEDRDKKRNGNMKSC--KIATWVISMVVACLTGGLVFGWWVFQFHPTN 72

Query: 61  RQLWMVPFSLVLMIAPIFVMMSVFISSFCTASMDHSTASA 100
           RQLWMVPFSLVLMIAPIFVMMS+ IS+FC  SMD +T SA
Sbjct: 73  RQLWMVPFSLVLMIAPIFVMMSLLISAFCN-SMDQTTTSA 109

BLAST of MS005928 vs. ExPASy TrEMBL
Match: A0A0A0L8F5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118220 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.5e-12
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 0

Query: 2  EVGLEMESGTKEEDEREAGKMKKKSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQ 61
          +VG+E+E   K E E++  K +K    K V   V + + S+ G  + GWW ++FH   +Q
Sbjct: 2  QVGIEIEDVMKGEGEQKKQKNRK---LKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQ 61

Query: 62 LWMVPFSLVLMIAPIFVMMSVFISSFCTASMD 94
           WMVPFSLVLMIAPIFV++SV ISSFC  SMD
Sbjct: 62 QWMVPFSLVLMIAPIFVLISVSISSFCN-SMD 89

BLAST of MS005928 vs. ExPASy TrEMBL
Match: A0A5D3DB24 (Putative permease/transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00680 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 0

Query: 2  EVGLEMESGTKEEDEREAGKMKKKSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQ 61
          +VG E+E   K E E++  K +K    K V   V + + S+ G  + GWW ++FH   +Q
Sbjct: 2  QVGTEIEDVMKGEGEQKKQKNRK---LKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQ 61

Query: 62 LWMVPFSLVLMIAPIFVMMSVFISSFCTASMD 94
           WMVPFSLVLMIAPIFV++SV ISSFC  SMD
Sbjct: 62 QWMVPFSLVLMIAPIFVLISVSISSFCN-SMD 89

BLAST of MS005928 vs. ExPASy TrEMBL
Match: A0A2N9FJR8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18938 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.3e-11
Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 0

Query: 12 KEEDEREAGKMKKKSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQLWMVPFSLVL 71
          ++E  +E  K + K+C   V SW  M   SM+GGL F WWE ++H  N QLWMVPFSL+L
Sbjct: 8  RDESHKEQ-KERVKTCI--VYSWSFM--VSMIGGLAFTWWEFEYHPTNTQLWMVPFSLIL 67

Query: 72 MIAPIFVMMSVFISSFCTASMD 94
          ++ P+FV  S+F+S  C++ MD
Sbjct: 68 LVTPLFVWFSIFVSDLCSSKMD 84

BLAST of MS005928 vs. ExPASy TrEMBL
Match: A0A5B7BZC7 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_043245 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.1e-10
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 0

Query: 12  KEEDEREAGKMKKKSCYKQVGSWVSMAVASMVGGLVFGWWEIQFHGENRQLWMVPFSLVL 71
           KEE +    K++K +  K   + ++ ++ S+VGGLV GWWE ++H  N QLWMVPF L+L
Sbjct: 42  KEERDVTCFKLEKSTVKKACIACLASSLISVVGGLVLGWWEFKYHPTNSQLWMVPFGLIL 101

Query: 72  MIAPIFVMMSVFISSFCTASMD 94
            + P+ V  SVF+S FC  S +
Sbjct: 102 FVTPVIVGFSVFVSHFCIISKE 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56384.12.4e-2062.00hypothetical protein Csa_011278 [Cucumis sativus][more]
KAG6582696.15.7e-1455.68hypothetical protein SDJN03_22698, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN56386.11.5e-1150.00hypothetical protein Csa_010779 [Cucumis sativus][more]
KAA0048855.13.4e-1150.00putative permease/transmembrane protein [Cucumis melo var. makuwa] >TYK20807.1 p... [more]
KAF3973370.11.7e-1051.85hypothetical protein CMV_003195 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L5S11.2e-2062.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118200 PE=4 SV=1[more]
A0A0A0L8F57.5e-1250.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118220 PE=4 SV=1[more]
A0A5D3DB241.7e-1150.00Putative permease/transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A2N9FJR86.3e-1147.56Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18938 PE=4 SV=1[more]
A0A5B7BZC74.1e-1043.90Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_043245... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032238Putative ATP-synthase-associated proteinPFAMPF16594ATP-synt_Zcoord: 35..85
e-value: 5.5E-17
score: 61.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR35165:SF1OS08G0113900 PROTEINcoord: 12..96
NoneNo IPR availablePANTHERPTHR35165OS08G0113900 PROTEINcoord: 12..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS005928.1MS005928.1mRNA