MS005915 (gene) Bitter gourd (TR) v1

Overview


Name	MS005915
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Vegetative cell wall protein gp1-like
Location	scaffold254: 2403623 .. 2406428 (+)
RNA-Seq Expression	MS005915
Synteny	MS005915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCACCCTCACCCTCCCGAAACTCCCCCATATTTCCCCCAATTCCACCACCAAGCTTCCCCTTCCCCCCATTCCCACGAATCTCGACTTCTCCCAAAACCCTAAAAAATCCCCGCACAGTTTCTTCCTTCGGAGCGTTCGCGATCTCAAATCATGTACTCTCCCTCTCACTGCTCTCGCATTGCCCTTCTTCCTCGATCCGCAGGTGAATCTCTCTCTATTTCTCTCGATTCTGTTTTGTGTTCGTGCGGTCTTTGGTTTCCGATTCGATTTCTTTCGTTGGGTTGTAGGATGCGCTTGCTGTTGGCGGGGAGTTCGGGATTTTGGAGGGGAGATCAGTTGCCCTAATTCACCCAATTGTTATGGGCTCCCTTTTCGCGTACACTCTGTGGGCAGGCTACTTGGGGTGGCAATGGCGGCGAGTGAGGACGATTCAGAATGAAATTAACGAGCTCAAGAAGCAACTGGCTCCTGCGGCGGTCACCCCTGATGGGAACCCAATTGACGCACCGCCATCTCCCACTGAATTGAAGATTCAGCAGCTCACAGAGGTATTTCTTTGGCTTAACCAATTTTCTATTAATAGAAATAATTGAGTTTTAAAAAAATTCAAATAAAGTAATATTGAATATATATATTTTTTCTTTTTAATTTTAAAACAACAAGGGAAGGGGTGGGGATGAGAACTCTTGACATATTGGTGATGTGCCAATTAGCGTTGATCGCTATAAAGTAATATCAATTGCCAAACTCCGACCATTTTATTTTGGTATATGAATATGTGGTGGGATATATTATGATATATTTTTACAAAATATGATTTTATCCGTCCGTTTGATAAAAGTATATGATTATAACTGCCTAAATAGTTTAATTGGTATATATTTCCACCCTTAATTTCCATCTCAATTTTCATCCGCGTATGTAAGGAAAAAAATATGACTATGACTATGACTATATATATTTTTTGAATAAAGACTATGTATAGATATAAATATGGAGAATCACAGTTGAAATTCAAAATATTTCATAGAGGCTTTTTTGTCTTCTTTTATGCAATTAAAGAAAATTCAGATAGTTTCTTAAACAAATTAAAAATATTTTTATCCATTCTTAAAACAAAAAATATAAAATTAATAAATATTATCTATAAATTAAGGATTCATCAACATTCTCGTAAAACCGAGACCGAGCATGACTCAGCGGTAATGTTTTCTCATTTCTTGAAAAGTTTCCAAAATTTCCAACATCAAAATAAAGTTGATTGTTTATGTTCCCATTTCCATTTTTTTTTCCAAAACATAATAAAATATTATTTTATTATTATTGGGTTATAAAATGAATATTAAAAAATAAGTATAACATAAAAAGTTTGAATATTTGATTTAAAAAATTAATTTTACTTTTTTATTTTAAAAGTTTAGAGAATGAAAAAAAAAGCTTTTTATTTATTAAAAAATAAGAAATGAAAAAAGAAGAAGAAAAAAAAGAAAACGATAAACAAAAGCATTATCAAATGGGTTCTAAATAAATGGTCAAATATTATACATTATTATTCACTAGTTAAAACAGAAGTAATCATTATTAAATATTATAACAATACAATTTAATAAAAATTGATATTATTGATAGTTGTTGTAATAAAAATTATATTAACATTCATAGTTGATGTAAATTTATTTTAATTATTTATCATTTATTAATGTTAAATAGATTGTTATAATAAAAAAATATTTACTATCAATCAAATAAATTAAAATACTTTATTTTTTTAACTAAAAATAATATTAGCGTACTTTTTTAGTTAATGCATGTGTAATTAGCTATAAATAAGAAATATATTTTCTAATAATTATATAATATCTGATTCTCATTCAAAAAAATCTTAGTAAACAGCATCAAGTAAAAAAACATTAAAACATTTTCACTCATATTGAGCGTAAATGAATAGCAGAGATTATGATAATTTTTTAGGAAAAGATTGTCATAACTTTTGACTTAAAAGTGAGTGATCTGTGGTTAAATAGATATTTGATTCCTTTGTTCGGCAGGTAGTATTAGTACGTTTATAATTAAAGGCTTGCTTGTTTGATTGATACAGTTTTTCTTTCTAAGATTGAAACAAATCCGTTTGATGCTGACAATTCCAAAATCATACTAAGATTGAATTAATCCCTAGACTGAATTGTGAATTCTTACCCAACACAACACCAACAGAGTATCTGATGCATTGGTATTTGAAGTTCAGGAGAGGAAAGAGTTGATCAAAGGGTCCTTCAGAGATAGGCACTTCAATGCTGGCTCCATACTACTCGGATTCGGAGTTCTGGAATCGATCGGTGGAGGCGTAAATACCTGGTTTAGAACAGGAAAGCTCTTTCCTGGGCCTCACTTGTTTGCTGGAGCAGGTAAACCAAAAGCTTCTATATTTAATGTCTTATAATGTCACTGCATTGCATTCAGATCCCCCTCCTTTGGTACTTTAGTTTATGGTCTCGTCTCAACTGTTGGCACCGAAACTAGTTTGGGCAGACTATGAAACGGGGAGGATCCATTTCATTTCTATGTAGTCGTCGTGATCTCGATCTGATATGCATTTCCTTTCATTTCGTTGCTTACCAACAGGGATAACTGTTCTGTGGGCACTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGCAATGAGACAGCTAGAAATCTTCACATTGCGCTCAATGCTCTGAATGTTATTCTCTTTATATGGCAGATTCCCACTGGAATTGAAATTGTCTTCAAAGTCTTTGAATTCACTACTTGGCCT

mRNA sequence

ATGGCCATCACCCTCACCCTCCCGAAACTCCCCCATATTTCCCCCAATTCCACCACCAAGCTTCCCCTTCCCCCCATTCCCACGAATCTCGACTTCTCCCAAAACCCTAAAAAATCCCCGCACAGTTTCTTCCTTCGGAGCGTTCGCGATCTCAAATCATGTACTCTCCCTCTCACTGCTCTCGCATTGCCCTTCTTCCTCGATCCGCAGGATGCGCTTGCTGTTGGCGGGGAGTTCGGGATTTTGGAGGGGAGATCAGTTGCCCTAATTCACCCAATTGTTATGGGCTCCCTTTTCGCGTACACTCTGTGGGCAGGCTACTTGGGGTGGCAATGGCGGCGAGTGAGGACGATTCAGAATGAAATTAACGAGCTCAAGAAGCAACTGGCTCCTGCGGCGGTCACCCCTGATGGGAACCCAATTGACGCACCGCCATCTCCCACTGAATTGAAGATTCAGCAGCTCACAGAGGAGAGGAAAGAGTTGATCAAAGGGTCCTTCAGAGATAGGCACTTCAATGCTGGCTCCATACTACTCGGATTCGGAGTTCTGGAATCGATCGGTGGAGGCGTAAATACCTGGTTTAGAACAGGAAAGCTCTTTCCTGGGCCTCACTTGTTTGCTGGAGCAGGGATAACTGTTCTGTGGGCACTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGCAATGAGACAGCTAGAAATCTTCACATTGCGCTCAATGCTCTGAATGTTATTCTCTTTATATGGCAGATTCCCACTGGAATTGAAATTGTCTTCAAAGTCTTTGAATTCACTACTTGGCCT

Coding sequence (CDS)

ATGGCCATCACCCTCACCCTCCCGAAACTCCCCCATATTTCCCCCAATTCCACCACCAAGCTTCCCCTTCCCCCCATTCCCACGAATCTCGACTTCTCCCAAAACCCTAAAAAATCCCCGCACAGTTTCTTCCTTCGGAGCGTTCGCGATCTCAAATCATGTACTCTCCCTCTCACTGCTCTCGCATTGCCCTTCTTCCTCGATCCGCAGGATGCGCTTGCTGTTGGCGGGGAGTTCGGGATTTTGGAGGGGAGATCAGTTGCCCTAATTCACCCAATTGTTATGGGCTCCCTTTTCGCGTACACTCTGTGGGCAGGCTACTTGGGGTGGCAATGGCGGCGAGTGAGGACGATTCAGAATGAAATTAACGAGCTCAAGAAGCAACTGGCTCCTGCGGCGGTCACCCCTGATGGGAACCCAATTGACGCACCGCCATCTCCCACTGAATTGAAGATTCAGCAGCTCACAGAGGAGAGGAAAGAGTTGATCAAAGGGTCCTTCAGAGATAGGCACTTCAATGCTGGCTCCATACTACTCGGATTCGGAGTTCTGGAATCGATCGGTGGAGGCGTAAATACCTGGTTTAGAACAGGAAAGCTCTTTCCTGGGCCTCACTTGTTTGCTGGAGCAGGGATAACTGTTCTGTGGGCACTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGCAATGAGACAGCTAGAAATCTTCACATTGCGCTCAATGCTCTGAATGTTATTCTCTTTATATGGCAGATTCCCACTGGAATTGAAATTGTCTTCAAAGTCTTTGAATTCACTACTTGGCCT

Protein sequence

MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTALALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQNEINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGFGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALNALNVILFIWQIPTGIEIVFKVFEFTTWP

Homology

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BLAST of MS005915 vs. NCBI nr
Match: XP_022147498.1 (uncharacterized protein LOC111016406 [Momordica charantia])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITLTLPKLPHISPNSTTK  LPPIPTNLDFSQNPKKSP+SFFLRSVRDLKSCTLPLTA
Sbjct: 33  MAITLTLPKLPHISPNSTTK--LPPIPTNLDFSQNPKKSPYSFFLRSVRDLKSCTLPLTA 92

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN
Sbjct: 93  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 152

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 153 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 212

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 213 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 272

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           NALNVILFIWQIPTGIEIVFKVFEFTTWP
Sbjct: 273 NALNVILFIWQIPTGIEIVFKVFEFTTWP 299

[Close]

BLAST of MS005915 vs. NCBI nr
Match: XP_038884717.1 (uncharacterized protein LOC120075410 [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 237/269 (88.10%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLPHI+P S++KL LP IPTNL FSQNP K P +FF++++R LK  TLPLTA
Sbjct: 1   MAITLSLPKLPHITPISSSKLSLPSIPTNLAFSQNP-KCPKTFFIQNLRSLKPYTLPLTA 60

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALAVGGEFGILEGRS ALIHP+VMG+LF YTLWAGYLGWQWRRVRTIQN
Sbjct: 61  LTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGALFVYTLWAGYLGWQWRRVRTIQN 120

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+APAAVTPDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 121 EINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 181 FGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           N LNVILFIWQIPTGI+IVFKVFEFTTWP
Sbjct: 241 NFLNVILFIWQIPTGIDIVFKVFEFTTWP 268

[Close]

BLAST of MS005915 vs. NCBI nr
Match: XP_008437852.1 (PREDICTED: uncharacterized protein LOC103483159 [Cucumis melo] >KAA0048865.1 uncharacterized protein E6C27_scaffold171G00800 [Cucumis melo var. makuwa] >TYK20817.1 uncharacterized protein E5676_scaffold291G00790 [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 2.9e-129
Identity = 233/269 (86.62%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLPH +P S++KLP+P IPTNL  SQNPK S ++ F+++V +LK  T+PLTA
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCS-NNLFIQTVHNLKPYTIPLTA 60

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALAVGGEFGILEGRS ALIHP+VMG LF YTLWAGYLGWQWRRVRTIQN
Sbjct: 61  LTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTIQN 120

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+APAAVTPDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 121 EINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 181 FGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           NALNVILFIWQIPTGI+IVFKVFEFT WP
Sbjct: 241 NALNVILFIWQIPTGIDIVFKVFEFTKWP 268

[Close]

BLAST of MS005915 vs. NCBI nr
Match: XP_022979305.1 (uncharacterized protein LOC111479070 [Cucurbita maxima])

HSP 1 Score: 469.5 bits (1207), Expect = 1.9e-128
Identity = 228/269 (84.76%), Postives = 249/269 (92.57%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLP I+P  ++KLPLP IPT L FSQNP KSPH+FF++SVR+LK  TLPLTA
Sbjct: 38  MAITLSLPKLPIIAPIGSSKLPLPSIPTKLHFSQNP-KSPHTFFIQSVRNLKPYTLPLTA 97

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALA GGEFGILEGRS+ALIHP+VMG LF +TLWAGYLGWQWRRVRTIQN
Sbjct: 98  LTLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQN 157

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+ PAAV PDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI+LG
Sbjct: 158 EINELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILG 217

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGG+NTW RTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 218 FGVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 277

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           NAL ++LF+WQIPTGI+IV KVFEFTTWP
Sbjct: 278 NALTLVLFVWQIPTGIDIVLKVFEFTTWP 305

[Close]

BLAST of MS005915 vs. NCBI nr
Match: XP_004133799.1 (uncharacterized protein LOC101206421 [Cucumis sativus] >KGN56398.1 hypothetical protein Csa_011559 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 7.2e-128
Identity = 229/269 (85.13%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLPH +P S++KLP+P IPTNL  SQNPK S ++ F+++V++LK  T+PLTA
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCS-NNLFIQTVQNLKPYTIPLTA 60

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALAVGGEFGILEGRS ALIHP+VMG LF YTLWAGYLGWQWRRVRT+QN
Sbjct: 61  LTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQN 120

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+APAAVTPDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 121 EINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 181 FGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           N LNV+LFIWQIPTGI+IV KVFEFT WP
Sbjct: 241 NTLNVLLFIWQIPTGIDIVLKVFEFTKWP 268

[Close]

BLAST of MS005915 vs. ExPASy TrEMBL
Match: A0A6J1D1H0 (uncharacterized protein LOC111016406 OS=Momordica charantia OX=3673 GN=LOC111016406 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.7e-148
Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITLTLPKLPHISPNSTTK  LPPIPTNLDFSQNPKKSP+SFFLRSVRDLKSCTLPLTA
Sbjct: 33  MAITLTLPKLPHISPNSTTK--LPPIPTNLDFSQNPKKSPYSFFLRSVRDLKSCTLPLTA 92

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN
Sbjct: 93  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 152

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 153 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 212

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 213 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 272

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           NALNVILFIWQIPTGIEIVFKVFEFTTWP
Sbjct: 273 NALNVILFIWQIPTGIEIVFKVFEFTTWP 299

[Close]

BLAST of MS005915 vs. ExPASy TrEMBL
Match: A0A5D3DB32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00790 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 233/269 (86.62%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLPH +P S++KLP+P IPTNL  SQNPK S ++ F+++V +LK  T+PLTA
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCS-NNLFIQTVHNLKPYTIPLTA 60

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALAVGGEFGILEGRS ALIHP+VMG LF YTLWAGYLGWQWRRVRTIQN
Sbjct: 61  LTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTIQN 120

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+APAAVTPDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 121 EINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 181 FGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           NALNVILFIWQIPTGI+IVFKVFEFT WP
Sbjct: 241 NALNVILFIWQIPTGIDIVFKVFEFTKWP 268

[Close]

BLAST of MS005915 vs. ExPASy TrEMBL
Match: A0A1S3AUZ2 (uncharacterized protein LOC103483159 OS=Cucumis melo OX=3656 GN=LOC103483159 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 233/269 (86.62%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLPH +P S++KLP+P IPTNL  SQNPK S ++ F+++V +LK  T+PLTA
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCS-NNLFIQTVHNLKPYTIPLTA 60

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALAVGGEFGILEGRS ALIHP+VMG LF YTLWAGYLGWQWRRVRTIQN
Sbjct: 61  LTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTIQN 120

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+APAAVTPDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 121 EINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 181 FGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           NALNVILFIWQIPTGI+IVFKVFEFT WP
Sbjct: 241 NALNVILFIWQIPTGIDIVFKVFEFTKWP 268

[Close]

BLAST of MS005915 vs. ExPASy TrEMBL
Match: A0A6J1ISV5 (uncharacterized protein LOC111479070 OS=Cucurbita maxima OX=3661 GN=LOC111479070 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.1e-129
Identity = 228/269 (84.76%), Postives = 249/269 (92.57%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLP I+P  ++KLPLP IPT L FSQNP KSPH+FF++SVR+LK  TLPLTA
Sbjct: 38  MAITLSLPKLPIIAPIGSSKLPLPSIPTKLHFSQNP-KSPHTFFIQSVRNLKPYTLPLTA 97

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALA GGEFGILEGRS+ALIHP+VMG LF +TLWAGYLGWQWRRVRTIQN
Sbjct: 98  LTLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQN 157

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+ PAAV PDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI+LG
Sbjct: 158 EINELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILG 217

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGG+NTW RTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 218 FGVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 277

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           NAL ++LF+WQIPTGI+IV KVFEFTTWP
Sbjct: 278 NALTLVLFVWQIPTGIDIVLKVFEFTTWP 305

[Close]

BLAST of MS005915 vs. ExPASy TrEMBL
Match: A0A0A0L3S2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119320 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.5e-128
Identity = 229/269 (85.13%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNSTTKLPLPPIPTNLDFSQNPKKSPHSFFLRSVRDLKSCTLPLTA 60
           MAITL+LPKLPH +P S++KLP+P IPTNL  SQNPK S ++ F+++V++LK  T+PLTA
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCS-NNLFIQTVQNLKPYTIPLTA 60

Query: 61  LALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRVRTIQN 120
           L LPFFL PQDALAVGGEFGILEGRS ALIHP+VMG LF YTLWAGYLGWQWRRVRT+QN
Sbjct: 61  LTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQN 120

Query: 121 EINELKKQLAPAAVTPDGNPIDAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180
           EINELKKQ+APAAVTPDG P++APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG
Sbjct: 121 EINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLG 180

Query: 181 FGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240
           FGVLE+IGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL
Sbjct: 181 FGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIAL 240

Query: 241 NALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           N LNV+LFIWQIPTGI+IV KVFEFT WP
Sbjct: 241 NTLNVLLFIWQIPTGIDIVLKVFEFTKWP 268

[Close]

BLAST of MS005915 vs. TAIR 10
Match: AT3G61870.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-100
Identity = 188/277 (67.87%), Postives = 220/277 (79.42%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNS---TTKLPLPPIPTNLDFSQNPK--KSPHSFFLRSVRDLKSCT 60
           MA TL      H+ P +    T   L PI T     + P+   +P++  L     LKS +
Sbjct: 1   MATTLHCLSTLHLLPRTHHPKTLNSLKPITTKSQPCKTPEIPSTPNALQL-----LKSSS 60

Query: 61  LPLTALALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRV 120
           LPL  +ALPFFLDPQDA A GGEFGILEGRS ALIHPIVMG LFAYTLW GYLGWQWRRV
Sbjct: 61  LPLAVIALPFFLDPQDAAAAGGEFGILEGRSFALIHPIVMGGLFAYTLWTGYLGWQWRRV 120

Query: 121 RTIQNEINELKKQLAPAAVTPDGNPI---DAPPSPTELKIQQLTEERKELIKGSFRDRHF 180
           RTIQ+EI++LKKQL P  V+PDG+      +PPS TEL+IQ+LTEERKEL+KGS+RD+HF
Sbjct: 121 RTIQSEISDLKKQLKPTPVSPDGSTAVDSSSPPSTTELQIQRLTEERKELVKGSYRDKHF 180

Query: 181 NAGSILLGFGVLESIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNET 240
           +AGS+LLGFGVLE++ GGVNT+ RTGKLFPGPHL+AGAGITVLWA AAALVPAMQKGN+T
Sbjct: 181 DAGSVLLGFGVLEAVFGGVNTYLRTGKLFPGPHLYAGAGITVLWAAAAALVPAMQKGNDT 240

Query: 241 ARNLHIALNALNVILFIWQIPTGIEIVFKVFEFTTWP 270
           AR+LHIALNA+NV+LFIWQIPTG++IV KVFEFT WP
Sbjct: 241 ARSLHIALNAVNVLLFIWQIPTGLDIVLKVFEFTKWP 272

[Close]

BLAST of MS005915 vs. TAIR 10
Match: AT3G61870.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 262.7 bits (670), Expect = 3.3e-70
Identity = 139/219 (63.47%), Postives = 165/219 (75.34%), Query Frame = 0


Query: 1   MAITLTLPKLPHISPNS---TTKLPLPPIPTNLDFSQNPK--KSPHSFFLRSVRDLKSCT 60
           MA TL      H+ P +    T   L PI T     + P+   +P++  L     LKS +
Sbjct: 1   MATTLHCLSTLHLLPRTHHPKTLNSLKPITTKSQPCKTPEIPSTPNALQL-----LKSSS 60

Query: 61  LPLTALALPFFLDPQDALAVGGEFGILEGRSVALIHPIVMGSLFAYTLWAGYLGWQWRRV 120
           LPL  +ALPFFLDPQDA A GGEFGILEGRS ALIHPIVMG LFAYTLW GYLGWQWRRV
Sbjct: 61  LPLAVIALPFFLDPQDAAAAGGEFGILEGRSFALIHPIVMGGLFAYTLWTGYLGWQWRRV 120

Query: 121 RTIQNEINELKKQLAPAAVTPDGNPI---DAPPSPTELKIQQLTEERKELIKGSFRDRHF 180
           RTIQ+EI++LKKQL P  V+PDG+      +PPS TEL+IQ+LTEERKEL+KGS+RD+HF
Sbjct: 121 RTIQSEISDLKKQLKPTPVSPDGSTAVDSSSPPSTTELQIQRLTEERKELVKGSYRDKHF 180

Query: 181 NAGSILLGFGVLESIGGGVNTWFRTGKLFPGPHLFAGAG 212
           +AGS+LLGFGVLE++ GGVNT+ RTGKLFPGPHL+AGAG
Sbjct: 181 DAGSVLLGFGVLEAVFGGVNTYLRTGKLFPGPHLYAGAG 214

The following BLAST results are available for this feature:

BLAST of MS005915 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147498.1	1.4e-147	98.88	uncharacterized protein LOC111016406 [Momordica charantia]	[more]
XP_038884717.1	1.4e-131	88.10	uncharacterized protein LOC120075410 [Benincasa hispida]	[more]
XP_008437852.1	2.9e-129	86.62	PREDICTED: uncharacterized protein LOC103483159 [Cucumis melo] >KAA0048865.1 unc...	[more]
XP_022979305.1	1.9e-128	84.76	uncharacterized protein LOC111479070 [Cucurbita maxima]	[more]
XP_004133799.1	7.2e-128	85.13	uncharacterized protein LOC101206421 [Cucumis sativus] >KGN56398.1 hypothetical ...	[more]

BLAST of MS005915 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS005915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1H0	6.7e-148	98.88	uncharacterized protein LOC111016406 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5D3DB32	1.4e-129	86.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AUZ2	1.4e-129	86.62	uncharacterized protein LOC103483159 OS=Cucumis melo OX=3656 GN=LOC103483159 PE=...	[more]
A0A6J1ISV5	9.1e-129	84.76	uncharacterized protein LOC111479070 OS=Cucurbita maxima OX=3661 GN=LOC111479070...	[more]
A0A0A0L3S2	3.5e-128	85.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119320 PE=4 SV=1	[more]

BLAST of MS005915 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61870.1	1.8e-100	67.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G61870.2	3.3e-70	63.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025067	Protein of unknown function DUF4079	PFAM	PF13301	DUF4079	coord: 88..262 e-value: 5.9E-53 score: 178.8
None	No IPR available	PANTHER	PTHR34679	FAMILY NOT NAMED	coord: 30..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005915.1	MS005915.1	mRNA