MS005899 (gene) Bitter gourd (TR) v1

Overview
NameMS005899
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF688)
Locationscaffold254: 2311731 .. 2312627 (+)
RNA-Seq ExpressionMS005899
SyntenyMS005899
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGTGAAGCAAAGCTATGGCGGAACTCTGAACTTCCAAAGCTTCCTTTACTTGCAATTACAGCAATGGAGTCGCCAGATCGCTCCGGAATGCAAACCCCACCGATCCGCTCCTCAGTGTCCGTCCCATTTCGGTGGGAAGAGGAGCCCGGCAAGCCCAGGTTCTGTTTCACCACTCCCAATTCCAAGGAATCAACGGCTCAGAGAAAGTGCCTGGAACTTCCCCCCAGATTGCTGCTAATGGAACCCAAAATCCCAAAACTCCCTCCTCCCATCACCGCCCACAGACCCAAGGGGATGTTTCAGAACCAGTGTTGTGGGTCGTTCAGATTCGACAAACGGCAGCTCGGAGCCATGGTTCTGAGAAAGAGGGGAGTGCTGATGGAGAAGGAGTGGTTCTGTTGGCTGGGAAACAGGAGCTTTGGGCGCAGAGGACAACTTGGGTCTGCCTGTGGGAGTGTGTTTCCTTCTTCTTTGGAGAAGGGGAGTGGGAGTGAGAGTGAAACTGAAGGTGGGAGCAGTTCAAGGATGAAGCTTGCACAGACTCACACAGAAGGGAGCTTCTCTTCTTGTCTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGAACCACCCCTCTTCTTCTCTCTTTCTATATATTATCAGTCATAACATTTCAAAGTCAGATTCCTAAACTTGCACCCAAATTTCTCAGGCTTTCCTTTGGTTTTACCAAAAGAAAAAACTTCTGGGGATGAATTGAACTAGTCTTAAAATCAAGCATTTCTCAAGGGAGGGTGATGTTTTTCAAACAATTTGTCAGGAATGAAACTAATACAGTTTGTGGAATTGCAGGGAAGCATAGGGGAAGGGTTGAAGCAGATCAACATTCCATGGAAGAGGAAAAAGCAT

mRNA sequence

ATGGGAAGTGAAGCAAAGCTATGGCGGAACTCTGAACTTCCAAAGCTTCCTTTACTTGCAATTACAGCAATGGAGTCGCCAGATCGCTCCGGAATGCAAACCCCACCGATCCGCTCCTCAGTGTCCGTCCCATTTCGGTGGGAAGAGGAGCCCGGCAAGCCCAGGTTCTGTTTCACCACTCCCAATTCCAAGGAATCAACGGCTCAGAGAAAGTGCCTGGAACTTCCCCCCAGATTGCTGCTAATGGAACCCAAAATCCCAAAACTCCCTCCTCCCATCACCGCCCACAGACCCAAGGGGATGTTTCAGAACCAGTGTTGTGGGTCGTTCAGATTCGACAAACGGCAGCTCGGAGCCATGGTTCTGAGAAAGAGGGGAGTGCTGATGGAGAAGGAGTGGTTCTGTTGGCTGGGAAACAGGAGCTTTGGGCGCAGAGGACAACTTGGGTCTGCCTGTGGGAGTGTGTTTCCTTCTTCTTTGGAGAAGGGGAGTGGGAGTGAGAGTGAAACTGAAGGTGGGAGCAGTTCAAGGATGAAGCTTGCACAGACTCACACAGAAGGGAGCTTCTCTTCTTGTCTTGTCCAAGCCAAGACTGAGTTTTGGGGAAGCATAGGGGAAGGGTTGAAGCAGATCAACATTCCATGGAAGAGGAAAAAGCAT

Coding sequence (CDS)

ATGGGAAGTGAAGCAAAGCTATGGCGGAACTCTGAACTTCCAAAGCTTCCTTTACTTGCAATTACAGCAATGGAGTCGCCAGATCGCTCCGGAATGCAAACCCCACCGATCCGCTCCTCAGTGTCCGTCCCATTTCGGTGGGAAGAGGAGCCCGGCAAGCCCAGGTTCTGTTTCACCACTCCCAATTCCAAGGAATCAACGGCTCAGAGAAAGTGCCTGGAACTTCCCCCCAGATTGCTGCTAATGGAACCCAAAATCCCAAAACTCCCTCCTCCCATCACCGCCCACAGACCCAAGGGGATGTTTCAGAACCAGTGTTGTGGGTCGTTCAGATTCGACAAACGGCAGCTCGGAGCCATGGTTCTGAGAAAGAGGGGAGTGCTGATGGAGAAGGAGTGGTTCTGTTGGCTGGGAAACAGGAGCTTTGGGCGCAGAGGACAACTTGGGTCTGCCTGTGGGAGTGTGTTTCCTTCTTCTTTGGAGAAGGGGAGTGGGAGTGAGAGTGAAACTGAAGGTGGGAGCAGTTCAAGGATGAAGCTTGCACAGACTCACACAGAAGGGAGCTTCTCTTCTTGTCTTGTCCAAGCCAAGACTGAGTTTTGGGGAAGCATAGGGGAAGGGTTGAAGCAGATCAACATTCCATGGAAGAGGAAAAAGCAT

Protein sequence

MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTTPNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAMVLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKLAQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKKH
Homology
BLAST of MS005899 vs. NCBI nr
Match: XP_022147429.1 (uncharacterized protein At4g00950 [Momordica charantia])

HSP 1 Score: 453.8 bits (1166), Expect = 8.7e-124
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT
Sbjct: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60

Query: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120
           PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM
Sbjct: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120

Query: 121 VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180
           VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL
Sbjct: 121 VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180

Query: 181 AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKKH 221
           AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKKH
Sbjct: 181 AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKKH 220

BLAST of MS005899 vs. NCBI nr
Match: XP_022980847.1 (uncharacterized protein At4g00950 [Cucurbita maxima])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 171/221 (77.38%), Postives = 188/221 (85.07%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKLWRNSE+PKLPLLA+ AMESPDRSGM TPPI +SVSVPFRWEEEPGKPRFCF T
Sbjct: 1   MGSEAKLWRNSEVPKLPLLAVAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFRT 60

Query: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQ--NQCCGSFRFDKRQLG 120
           PNS  +T Q KCLELPPRLLL++PKI KLPPPI AH  KG+FQ   Q CGSFR+DK QLG
Sbjct: 61  PNSSSAT-QTKCLELPPRLLLLDPKISKLPPPIPAH--KGIFQLPKQSCGSFRYDKSQLG 120

Query: 121 AMVLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRM 180
           AMVLRKRGVL+EKEWFCWLG  SFGR+G++GSACGSVFPSSLEK    +      SSS M
Sbjct: 121 AMVLRKRGVLIEKEWFCWLGKLSFGRKGEVGSACGSVFPSSLEK-ENEDGVVAERSSSGM 180

Query: 181 KLAQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKK 220
           K+A+T  EGSFSSCLV+AKTEFWGSIGEGLKQIN+PWK KK
Sbjct: 181 KVAETQKEGSFSSCLVKAKTEFWGSIGEGLKQINVPWKSKK 217

BLAST of MS005899 vs. NCBI nr
Match: XP_023527385.1 (uncharacterized protein At4g00950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 3.8e-87
Identity = 165/219 (75.34%), Postives = 184/219 (84.02%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKLWRNSE+PKLPLLA+ AMESPDRSGM TPPI +SVSVPFRWEEEPGKPRFCF T
Sbjct: 1   MGSEAKLWRNSEVPKLPLLAVAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFRT 60

Query: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120
           P+S  +T Q KCLELPPRLLL++PKI KLPPPI AH+    F  Q CGSFR+DK QLGAM
Sbjct: 61  PSSSSAT-QTKCLELPPRLLLLDPKISKLPPPIPAHKGIFQFPKQSCGSFRYDKTQLGAM 120

Query: 121 VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180
           VLRKRGVL+EKEWFCWLG  SFGR+G++GSA GSVFPSSLEK    ++     SSS MK+
Sbjct: 121 VLRKRGVLIEKEWFCWLGKLSFGRKGEVGSAYGSVFPSSLEK-ENEDAVVAERSSSGMKV 180

Query: 181 AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKK 220
           A+T  EGSFSSCLV+AKTEFWGSIGEG KQIN+PWK KK
Sbjct: 181 AETQKEGSFSSCLVKAKTEFWGSIGEGPKQINVPWKSKK 217

BLAST of MS005899 vs. NCBI nr
Match: KAG7019077.1 (Exportin-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 164/219 (74.89%), Postives = 182/219 (83.11%), Query Frame = 0

Query: 1    MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
            MGSEAKLWRNS++PKLPLLA+ AMESPDRSGM TPPI +SVSVPFRWEEEPGKPRFCF T
Sbjct: 1065 MGSEAKLWRNSKVPKLPLLAVAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFRT 1124

Query: 61   PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120
            PNS  +T Q KCLELPPRLLL++PKI KLPPPI AH+    F  Q  GSFR+DK QLGAM
Sbjct: 1125 PNSSSAT-QTKCLELPPRLLLLDPKISKLPPPIPAHKGIFQFPKQSRGSFRYDKTQLGAM 1184

Query: 121  VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180
            VLRKRGVL+E EWFCWLG  SFGR+G++GSA GSVFPSSLEK    +      SSS MK+
Sbjct: 1185 VLRKRGVLIE-EWFCWLGKLSFGRKGEVGSAYGSVFPSSLEK-ENEDGVVAERSSSGMKV 1244

Query: 181  AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKK 220
            A+T  EGSFSSCLV+AKTEFWGSIGEGLKQIN+PWK KK
Sbjct: 1245 AETQKEGSFSSCLVKAKTEFWGSIGEGLKQINVPWKSKK 1280

BLAST of MS005899 vs. NCBI nr
Match: XP_022924712.1 (uncharacterized protein At4g00950-like [Cucurbita moschata] >KAG6582679.1 hypothetical protein SDJN03_22681, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 164/219 (74.89%), Postives = 182/219 (83.11%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKLWRNS++PKLPLLA+ AMESPDRSGM TPPI +SVSVPFRWEEEPGKPRFCF T
Sbjct: 1   MGSEAKLWRNSKVPKLPLLAVAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFRT 60

Query: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120
           PNS  +T Q KCLELPPRLLL++PKI KLPPPI AH+    F  Q  GSFR+DK QLGAM
Sbjct: 61  PNSSSAT-QTKCLELPPRLLLLDPKISKLPPPIPAHKGIFQFPKQSRGSFRYDKTQLGAM 120

Query: 121 VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180
           VLRKRGVL+E EWFCWLG  SFGR+G++GSA GSVFPSSLEK    +      SSS MK+
Sbjct: 121 VLRKRGVLIE-EWFCWLGKLSFGRKGEVGSAYGSVFPSSLEK-ENEDGVVAERSSSGMKV 180

Query: 181 AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKK 220
           A+T  EGSFSSCLV+AKTEFWGSIGEGLKQIN+PWK KK
Sbjct: 181 AETQKEGSFSSCLVKAKTEFWGSIGEGLKQINVPWKSKK 216

BLAST of MS005899 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.8e-05
Identity = 68/228 (29.82%), Postives = 98/228 (42.98%), Query Frame = 0

Query: 10  NSELPKLPLLAITAMESPDRSGMQTPPIRSSV--SVPFRWEEEPGKPRFCFTTPNSKEST 69
           N  + KLP+L     +    S   + PI SS+  SVPF WEEEPGKP+   T+ +S  S+
Sbjct: 12  NLTVMKLPVL---PTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTSSSSSSSS 71

Query: 70  A-----------QRKCLELPPRLLLMEP---KIPKLPPPITA-HRPKGMFQNQ------- 129
           +             K LELPPRL L+E     + KL  PIT    P  M  ++       
Sbjct: 72  SPLTSYSSSPFETHKSLELPPRLHLLEKDGGSVTKLHSPITVFDGPYSMTTSKRMDSPSF 131

Query: 130 ---------CCGSFRFD------------KRQ----LGAM-VLRKRGVLMEKEWFCWLGN 188
                    C GSFR D            K+Q     G++ V++KRG L    +F +   
Sbjct: 132 RMMVKGSADCYGSFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRL---GFFGFRRR 191

BLAST of MS005899 vs. ExPASy TrEMBL
Match: A0A6J1D0Z4 (uncharacterized protein At4g00950 OS=Momordica charantia OX=3673 GN=LOC111016356 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.2e-124
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT
Sbjct: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60

Query: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120
           PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM
Sbjct: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120

Query: 121 VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180
           VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL
Sbjct: 121 VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180

Query: 181 AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKKH 221
           AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKKH
Sbjct: 181 AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKKH 220

BLAST of MS005899 vs. ExPASy TrEMBL
Match: A0A6J1ISE2 (uncharacterized protein At4g00950 OS=Cucurbita maxima OX=3661 GN=LOC111480117 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.9e-90
Identity = 171/221 (77.38%), Postives = 188/221 (85.07%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKLWRNSE+PKLPLLA+ AMESPDRSGM TPPI +SVSVPFRWEEEPGKPRFCF T
Sbjct: 1   MGSEAKLWRNSEVPKLPLLAVAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFRT 60

Query: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQ--NQCCGSFRFDKRQLG 120
           PNS  +T Q KCLELPPRLLL++PKI KLPPPI AH  KG+FQ   Q CGSFR+DK QLG
Sbjct: 61  PNSSSAT-QTKCLELPPRLLLLDPKISKLPPPIPAH--KGIFQLPKQSCGSFRYDKSQLG 120

Query: 121 AMVLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRM 180
           AMVLRKRGVL+EKEWFCWLG  SFGR+G++GSACGSVFPSSLEK    +      SSS M
Sbjct: 121 AMVLRKRGVLIEKEWFCWLGKLSFGRKGEVGSACGSVFPSSLEK-ENEDGVVAERSSSGM 180

Query: 181 KLAQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKK 220
           K+A+T  EGSFSSCLV+AKTEFWGSIGEGLKQIN+PWK KK
Sbjct: 181 KVAETQKEGSFSSCLVKAKTEFWGSIGEGLKQINVPWKSKK 217

BLAST of MS005899 vs. ExPASy TrEMBL
Match: A0A6J1E9R6 (uncharacterized protein At4g00950-like OS=Cucurbita moschata OX=3662 GN=LOC111432128 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.6e-85
Identity = 164/219 (74.89%), Postives = 182/219 (83.11%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKLWRNS++PKLPLLA+ AMESPDRSGM TPPI +SVSVPFRWEEEPGKPRFCF T
Sbjct: 1   MGSEAKLWRNSKVPKLPLLAVAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFRT 60

Query: 61  PNSKESTAQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAM 120
           PNS  +T Q KCLELPPRLLL++PKI KLPPPI AH+    F  Q  GSFR+DK QLGAM
Sbjct: 61  PNSSSAT-QTKCLELPPRLLLLDPKISKLPPPIPAHKGIFQFPKQSRGSFRYDKTQLGAM 120

Query: 121 VLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKL 180
           VLRKRGVL+E EWFCWLG  SFGR+G++GSA GSVFPSSLEK    +      SSS MK+
Sbjct: 121 VLRKRGVLIE-EWFCWLGKLSFGRKGEVGSAYGSVFPSSLEK-ENEDGVVAERSSSGMKV 180

Query: 181 AQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKK 220
           A+T  EGSFSSCLV+AKTEFWGSIGEGLKQIN+PWK KK
Sbjct: 181 AETQKEGSFSSCLVKAKTEFWGSIGEGLKQINVPWKSKK 216

BLAST of MS005899 vs. ExPASy TrEMBL
Match: A0A5D3DBI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00930 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.9e-74
Identity = 150/220 (68.18%), Postives = 165/220 (75.00%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKL RN E+PKLPLLAITAMESPDRSGM TPPI SSVSVPFRWEEEPGKPRFCF +
Sbjct: 1   MGSEAKLRRNYEVPKLPLLAITAMESPDRSGMLTPPIFSSVSVPFRWEEEPGKPRFCFNS 60

Query: 61  PNSKEST-AQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGA 120
            N    T  Q   LELPPRLLLM+PKIPKL P I + +    F   CC SFRF K QLGA
Sbjct: 61  LNIPTQTQTQTNSLELPPRLLLMDPKIPKLSPRIPSQKGFFQFHKHCCSSFRFHKTQLGA 120

Query: 121 MVLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMK 180
           MVLRKRG+L+EKEWFCW    +F R+G++GS   +VFPSSL+K           SSSRMK
Sbjct: 121 MVLRKRGMLIEKEWFCWWRKLNFRRKGEVGSDYAAVFPSSLDKER---------SSSRMK 180

Query: 181 LAQTHTEGSFSSCLVQAKTEFWGSIGEGLKQINIPWKRKK 220
           +A T   GSFSSC VQAKTEFWG+IGEG KQINIPWK KK
Sbjct: 181 VAVTQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKK 211

BLAST of MS005899 vs. ExPASy TrEMBL
Match: A0A0A0L338 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 151/223 (67.71%), Postives = 167/223 (74.89%), Query Frame = 0

Query: 1   MGSEAKLWRNSELPKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKL R+ E+PKLPLLAITAMESPDRSGM TPP+ SSVSVPFRWEEEPGKPRFCF +
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  PNSKEST-AQRKCLELPPRLLLMEPKIPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGA 120
            N    T  Q   LELPPRLLLM+PKI KL PPI + +    F   CC SFRFDK QLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGVLMEKEWFCWLGNRSFGRRGQLGSACGSVFPSSLEKGSGSESETEGGSSSRMK 180
           MVLRKRGVL+EKEWFCWLG  SF  +G++GS  G+VFPSSL+K           SSSRMK
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEK---------SSSRMK 211

Query: 181 LAQTHTEGSFSSCLVQAKTEFW---GSIGEGLKQINIPWKRKK 220
           +A     GSFSSC VQAKTEFW   G+IGEG KQINIPWK K+
Sbjct: 212 VAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSKR 245

BLAST of MS005899 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10
Identity = 68/211 (32.23%), Postives = 93/211 (44.08%), Query Frame = 0

Query: 31  GMQTPPIRSSVSVPFRWEEEPGKPRFCFTTPNSKESTAQRKCLELPPRLLLM-EPKIPKL 90
           G+ TPP+  + SVPF WEE PGKPR     P         + LELPPRL+L  E      
Sbjct: 36  GLATPPVNIAGSVPFLWEEAPGKPR-RVKKPARLNQKGVVRSLELPPRLVLPGESTTVNE 95

Query: 91  PPPITAHRPKGMFQNQCCGSFRFDKRQL----GAMVLRK-RGV---LMEKEWFCWLGNRS 150
           P P T             G +   +R L     A V+RK RGV     EKE     G+  
Sbjct: 96  PSPTTV----------LDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPEKEERLVGGSSR 155

Query: 151 FGRRGQLGSACGSVFPSSLEKGSGSESETE----GG-----SSSRMKLAQTHTEGSFSSC 210
           +G  G        +F  S  +  G +   +    GG       +++KL +   +GSF + 
Sbjct: 156 WGSFGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKKGSFFNL 215

Query: 211 LVQAKTEFW----GSIGEGLKQINIPWKRKK 220
               K++FW      + EG KQ+ IPWKRK+
Sbjct: 216 SHTTKSDFWLKMQARVYEGFKQV-IPWKRKQ 234

BLAST of MS005899 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-09
Identity = 32/74 (43.24%), Postives = 39/74 (52.70%), Query Frame = 0

Query: 14 PKLPLLAITAMESPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTTPNSKESTAQR--- 73
          PKLPL +I    + D  G+ TPP+  + SVPF WEE PGKPR             +R   
Sbjct: 15 PKLPLFSIPFNRACDTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNEREGG 74

Query: 74 -----KCLELPPRL 80
               +CLELPPRL
Sbjct: 75 GGGVVRCLELPPRL 88

BLAST of MS005899 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 8.4e-08
Identity = 55/194 (28.35%), Postives = 83/194 (42.78%), Query Frame = 0

Query: 26  SPDRSGMQTPPIRSSVSVPFRWEEEPGKPRFCFTTPNSKESTAQRKCLELPPRLLLMEPK 85
           SP    +   PI +  SVPF WE++PGKP+      +     +  KCL+LPPRLLL   +
Sbjct: 28  SPASPRVFASPIHTLASVPFCWEDQPGKPK------HPLRPLSYPKCLDLPPRLLL-PGE 87

Query: 86  IPKLPPPITAHRPKGMFQNQCCGSFRFDKRQLGAMVLRKRGVLMEKEWFCWLGNRSFGRR 145
             ++P P   H           G  RF         LR++G                  R
Sbjct: 88  FTQMPLPERKH-----------GLLRF---------LRRKG------------------R 147

Query: 146 GQLGSACGSVFPSSLEKGSGSESETEGGSSSRMKLAQTHTEGSFSSCLVQAKTEFWGSIG 205
           G +      VF S  ++   + +E      + MK+ + +  GS+        + FWGS+ 
Sbjct: 148 GDVVVRGNYVFLSENQRAGDNINE------NNMKIMKFNRSGSYHGGGSVKGSHFWGSLC 169

Query: 206 EGLKQINIPWKRKK 220
           +GLK + +PWK KK
Sbjct: 208 KGLK-LAMPWKNKK 169

BLAST of MS005899 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06
Identity = 59/191 (30.89%), Postives = 81/191 (42.41%), Query Frame = 0

Query: 31  GMQTPPIRSSVSVPFRWEEEPGKPRFCFTTPNSKESTAQRKCLELPPRLLLM-EPKIPKL 90
           G+ TPP+  + SVPF WEE PGKPR     P         + LELPPRL+L  E      
Sbjct: 36  GLATPPVNIAGSVPFLWEEAPGKPR-RVKKPARLNQKGVVRSLELPPRLVLPGESTTVNE 95

Query: 91  PPPITAHRPKGMFQNQCCGSFRFDKRQL----GAMVLRK-RGV---LMEKEWFCWLGNRS 150
           P P T             G +   +R L     A V+RK RGV     EKE     G+  
Sbjct: 96  PSPTTV----------LDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPEKEERLVGGSSR 155

Query: 151 FGRRGQLGSACGSVFPSSLEKGSGSESETE----GG-----SSSRMKLAQTHTEGSFSSC 204
           +G  G        +F  S  +  G +   +    GG       +++KL +   +GSF + 
Sbjct: 156 WGSFGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKKGSFFNL 215

BLAST of MS005899 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) )

HSP 1 Score: 50.1 bits (118), Expect = 2.7e-06
Identity = 68/228 (29.82%), Postives = 98/228 (42.98%), Query Frame = 0

Query: 10  NSELPKLPLLAITAMESPDRSGMQTPPIRSSV--SVPFRWEEEPGKPRFCFTTPNSKEST 69
           N  + KLP+L     +    S   + PI SS+  SVPF WEEEPGKP+   T+ +S  S+
Sbjct: 12  NLTVMKLPVL---PTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTSSSSSSSS 71

Query: 70  A-----------QRKCLELPPRLLLMEP---KIPKLPPPITA-HRPKGMFQNQ------- 129
           +             K LELPPRL L+E     + KL  PIT    P  M  ++       
Sbjct: 72  SPLTSYSSSPFETHKSLELPPRLHLLEKDGGSVTKLHSPITVFDGPYSMTTSKRMDSPSF 131

Query: 130 ---------CCGSFRFD------------KRQ----LGAM-VLRKRGVLMEKEWFCWLGN 188
                    C GSFR D            K+Q     G++ V++KRG L    +F +   
Sbjct: 132 RMMVKGSADCYGSFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRL---GFFGFRRR 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022147429.18.7e-124100.00uncharacterized protein At4g00950 [Momordica charantia][more]
XP_022980847.11.8e-8977.38uncharacterized protein At4g00950 [Cucurbita maxima][more]
XP_023527385.13.8e-8775.34uncharacterized protein At4g00950-like [Cucurbita pepo subsp. pepo][more]
KAG7019077.11.4e-8474.89Exportin-2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022924712.11.4e-8474.89uncharacterized protein At4g00950-like [Cucurbita moschata] >KAG6582679.1 hypoth... [more]
Match NameE-valueIdentityDescription
Q9M1603.8e-0529.82Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 P... [more]
Match NameE-valueIdentityDescription
A0A6J1D0Z44.2e-124100.00uncharacterized protein At4g00950 OS=Momordica charantia OX=3673 GN=LOC111016356... [more]
A0A6J1ISE28.9e-9077.38uncharacterized protein At4g00950 OS=Cucurbita maxima OX=3661 GN=LOC111480117 PE... [more]
A0A6J1E9R66.6e-8574.89uncharacterized protein At4g00950-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A5D3DBI98.9e-7468.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L3381.5e-7367.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119480 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G53030.12.4e-1032.23unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT4G27810.17.6e-0943.24unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT2G46535.18.4e-0828.35unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT5G53030.22.1e-0630.89unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT4G00950.12.7e-0629.82Protein of unknown function (DUF688) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007789Protein of unknown function DUF688PFAMPF05097DUF688coord: 31..92
e-value: 4.9E-5
score: 22.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..180
NoneNo IPR availablePANTHERPTHR34371OS01G0551000 PROTEINcoord: 1..219
NoneNo IPR availablePANTHERPTHR34371:SF2DUF688 FAMILY PROTEINcoord: 1..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS005899.1MS005899.1mRNA