MS005842 (gene) Bitter gourd (TR) v1

Overview


Name	MS005842
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	desiccation protectant protein Lea14 homolog
Location	scaffold254: 1964039 .. 1964665 (+)
RNA-Seq Expression	MS005842
Synteny	MS005842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTTTGATCGACAAGGCGAAGGAGTTTGTGGCGGAGAAAGTGGCCAATATGCCGAAGCCGGAGGCCTCCGTCACCGACGTCGATTTCAAGGATTTGAGCCGCGATTCCGCCGAGTATTTGGCAAAGGTCACCGTCTCCAATCCTTACAGCCACTCCATCCCTATCTGCGAGATCTCGTACACTCTCAAAAGTGACGGCAGGTTCGATTTTCCACTTCGATCATCTTCGATTTGATTATGTTAGGTCTAAAATTTCACGATCGATTCGGATCAGATCGGAAATTATTTTCAATAATGTTCGTCTTCTGGAGGATTGAAATGATTTGTTGCTGAGATTGATTGTACGATTACTGAATGATGAATATTGTGCAGAGTGATTGTTTCGGGGACGGTGCCGGATCCAGGATCTCTGAAAGCGAGCGATTCGACGCTGCTGGAAGTAGGGGTGAAAGTGCCGCACAGCATACTGCTAAGCTTGGTGAAGGACATTGGCCGAGATTGGGACATAGATTATGAGTTGTTTATCGGACTCACCATTGATCTTCCAGTCGTCGGAAACTTCACCATTCCTCTGTCCACCAAAGGCGAGATCAAGCTCCCTACCATCTCTGACTTCTTCGCT

mRNA sequence

ATGGCGGGTTTGATCGACAAGGCGAAGGAGTTTGTGGCGGAGAAAGTGGCCAATATGCCGAAGCCGGAGGCCTCCGTCACCGACGTCGATTTCAAGGATTTGAGCCGCGATTCCGCCGAGTATTTGGCAAAGGTCACCGTCTCCAATCCTTACAGCCACTCCATCCCTATCTGCGAGATCTCGTACACTCTCAAAAGTGACGGCAGAGTGATTGTTTCGGGGACGGTGCCGGATCCAGGATCTCTGAAAGCGAGCGATTCGACGCTGCTGGAAGTAGGGGTGAAAGTGCCGCACAGCATACTGCTAAGCTTGGTGAAGGACATTGGCCGAGATTGGGACATAGATTATGAGTTGTTTATCGGACTCACCATTGATCTTCCAGTCGTCGGAAACTTCACCATTCCTCTGTCCACCAAAGGCGAGATCAAGCTCCCTACCATCTCTGACTTCTTCGCT

Coding sequence (CDS)

ATGGCGGGTTTGATCGACAAGGCGAAGGAGTTTGTGGCGGAGAAAGTGGCCAATATGCCGAAGCCGGAGGCCTCCGTCACCGACGTCGATTTCAAGGATTTGAGCCGCGATTCCGCCGAGTATTTGGCAAAGGTCACCGTCTCCAATCCTTACAGCCACTCCATCCCTATCTGCGAGATCTCGTACACTCTCAAAAGTGACGGCAGAGTGATTGTTTCGGGGACGGTGCCGGATCCAGGATCTCTGAAAGCGAGCGATTCGACGCTGCTGGAAGTAGGGGTGAAAGTGCCGCACAGCATACTGCTAAGCTTGGTGAAGGACATTGGCCGAGATTGGGACATAGATTATGAGTTGTTTATCGGACTCACCATTGATCTTCCAGTCGTCGGAAACTTCACCATTCCTCTGTCCACCAAAGGCGAGATCAAGCTCCCTACCATCTCTGACTTCTTCGCT

Protein sequence

MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEISYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFIGLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA

Homology

[Close]

BLAST of MS005842 vs. NCBI nr
Match: XP_022147435.1 (desiccation protectant protein Lea14 homolog [Momordica charantia])

HSP 1 Score: 296.6 bits (758), Expect = 1.2e-76
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI
Sbjct: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYEL I
Sbjct: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELDI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA 153
           GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA
Sbjct: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA 152

[Close]

BLAST of MS005842 vs. NCBI nr
Match: XP_022933415.1 (desiccation protectant protein Lea14 homolog [Cucurbita moschata] >KAG6597117.1 hypothetical protein SDJN03_10297, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028579.1 hypothetical protein SDJN02_09760 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258.5 bits (659), Expect = 3.7e-65
Identity = 125/151 (82.78%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLID+AK +V+ KVANMPKPEASVTDVDFK LSRDS EYLA V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY LKSDGR +V+GTVPDPGSLKAS ST++EVGVKVPHS+++SL KDIGRDWDIDYEL I
Sbjct: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLTIDLPV+G+FTIPLSTKGEIKLPT SD F
Sbjct: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 151

[Close]

BLAST of MS005842 vs. NCBI nr
Match: XP_022147268.1 (desiccation protectant protein Lea14 homolog [Momordica charantia])

HSP 1 Score: 258.1 bits (658), Expect = 4.9e-65
Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLIDKAKEFVAEK+AN+PKPEASV DVDFK +SRDS  Y A V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDKAKEFVAEKLANIPKPEASVNDVDFKSISRDSITYQADVSVSNPYSHAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SYTLKS+GRVI SG VPDPGSLKASDST+LEV VKVPHSILLSL +DIGRDWDIDYEL I
Sbjct: 61  SYTLKSNGRVIASGMVPDPGSLKASDSTMLEVAVKVPHSILLSLARDIGRDWDIDYELEI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLTIDLPV+GNFTIPLSTKGEIKLPT SD +
Sbjct: 121 GLTIDLPVIGNFTIPLSTKGEIKLPTFSDLW 151

[Close]

BLAST of MS005842 vs. NCBI nr
Match: XP_023540601.1 (desiccation protectant protein Lea14 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 124/151 (82.12%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLID+AK +V+EKVANMPKPEASVTDVDFK LSRDS EYLA V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDRAKNYVSEKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY LKSDGR +V+GTVPDPGSLKAS ST++EVGVKVPHS+++SL KDIGRDWDIDYEL I
Sbjct: 61  SYNLKSDGRTVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
            LTIDLPV+G+F+IPLSTKGEIKLPT SD F
Sbjct: 121 RLTIDLPVIGDFSIPLSTKGEIKLPTFSDMF 151

[Close]

BLAST of MS005842 vs. NCBI nr
Match: XP_022974652.1 (desiccation protectant protein Lea14 homolog [Cucurbita maxima] >XP_022975028.1 desiccation protectant protein Lea14 homolog [Cucurbita maxima] >XP_022975577.1 desiccation protectant protein Lea14 homolog [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 124/151 (82.12%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLID+AK +V+ KVANMPKPEASVTDVDFK LSRDS EYLA V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY LKSDGR +V+GTVPDPGSLKAS ST++EVGVKVPHS+++SL KDIGRDWDIDYEL I
Sbjct: 61  SYNLKSDGRTVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
            LTIDLPV+G+FTIPLSTKGEIKLPT SD F
Sbjct: 121 RLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 151

[Close]

BLAST of MS005842 vs. ExPASy Swiss-Prot
Match: P46519 (Desiccation protectant protein Lea14 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-63
Identity = 119/152 (78.29%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           M+ L+DKAK +VAEKV NMPKPEASVTDVDFK +SRDS EYLAKV+VSNPYS  IPICEI
Sbjct: 1   MSQLLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
            Y+LKS G+ I SGT+PDPGSLKASD+T+L+V VKVPHSILLSL KDIG DWDIDY+L +
Sbjct: 61  KYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDL 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA 153
           GL IDLPV+GNFTIPLS KGEIKLPT+SD FA
Sbjct: 121 GLVIDLPVIGNFTIPLSQKGEIKLPTLSDMFA 152

[Close]

BLAST of MS005842 vs. ExPASy Swiss-Prot
Match: P46518 (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum OX=3635 GN=LEA14-A PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-59
Identity = 112/151 (74.17%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           M+ L++KAK+FV +KVAN+ KPEASV+DVD K +SR+  EY AKV+VSNPYSHSIPICEI
Sbjct: 1   MSQLLEKAKDFVVDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY  +S GR I SGT+PDPGSLKASD+T+L+V VKVP++IL+SLVKDIG DWDIDYEL +
Sbjct: 61  SYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYELEL 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLTIDLP+VGNFTIPLS KGEIKLPT+SD F
Sbjct: 121 GLTIDLPIVGNFTIPLSQKGEIKLPTLSDIF 151

[Close]

BLAST of MS005842 vs. ExPASy Swiss-Prot
Match: O03983 (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana OX=3702 GN=LEA14 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-57
Identity = 107/151 (70.86%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MA L+DKAK+FVA+K+  +PKPE SVTDVD KD++RDS EYLAKV+V+NPYSHSIPICEI
Sbjct: 1   MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           S+T  S GR I  G +PDPGSLKA D T L++ V VP+SIL +L +D+G DWDIDYEL I
Sbjct: 61  SFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLTIDLPVVG FTIP+S+KGEIKLPT  DFF
Sbjct: 121 GLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151

[Close]

BLAST of MS005842 vs. ExPASy Swiss-Prot
Match: P22241 (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-52
Identity = 101/151 (66.89%), Postives = 120/151 (79.47%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MA L++KAK FVAEKVAN+ KP+ASV DVD KD+ R    YL ++ V NPYS SIP+ EI
Sbjct: 1   MAQLMNKAKNFVAEKVANVEKPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPVGEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
            YTLKS GRVIVSG +PDPGSLK +D T+LE  +KVPHS L+SL+KDIG D DIDY L +
Sbjct: 61  KYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIKDIGADMDIDYVLEL 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GL +DLPV+GNFTIPLS KGE+KLP +SD F
Sbjct: 121 GLVVDLPVIGNFTIPLSHKGEMKLPGLSDIF 151

[Close]

BLAST of MS005842 vs. ExPASy Swiss-Prot
Match: O82355 (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana OX=3702 GN=At2g46140 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-50
Identity = 97/151 (64.24%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           ++ L+DKAK F AEK+AN+P PEA+V DVDFK ++RD  +Y AKV+V NPYS SIPIC+I
Sbjct: 16  ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQI 75

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY LKS  R I SGT+PDPGSL  S +T+L+V VKV +SI +SL+KD+  DWDIDY+L I
Sbjct: 76  SYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDI 135

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLT D+PVVG+ TIP+ST+GEIKLP++ DFF
Sbjct: 136 GLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 166

[Close]

BLAST of MS005842 vs. ExPASy TrEMBL
Match: A0A6J1D060 (desiccation protectant protein Lea14 homolog OS=Momordica charantia OX=3673 GN=LOC111016359 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.0e-77
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI
Sbjct: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYEL I
Sbjct: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELDI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA 153
           GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA
Sbjct: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA 152

[Close]

BLAST of MS005842 vs. ExPASy TrEMBL
Match: A0A6J1F4U2 (desiccation protectant protein Lea14 homolog OS=Cucurbita moschata OX=3662 GN=LOC111440838 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65
Identity = 125/151 (82.78%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLID+AK +V+ KVANMPKPEASVTDVDFK LSRDS EYLA V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY LKSDGR +V+GTVPDPGSLKAS ST++EVGVKVPHS+++SL KDIGRDWDIDYEL I
Sbjct: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLTIDLPV+G+FTIPLSTKGEIKLPT SD F
Sbjct: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 151

[Close]

BLAST of MS005842 vs. ExPASy TrEMBL
Match: A0A6J1D0U8 (desiccation protectant protein Lea14 homolog OS=Momordica charantia OX=3673 GN=LOC111016263 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.4e-65
Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLIDKAKEFVAEK+AN+PKPEASV DVDFK +SRDS  Y A V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDKAKEFVAEKLANIPKPEASVNDVDFKSISRDSITYQADVSVSNPYSHAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SYTLKS+GRVI SG VPDPGSLKASDST+LEV VKVPHSILLSL +DIGRDWDIDYEL I
Sbjct: 61  SYTLKSNGRVIASGMVPDPGSLKASDSTMLEVAVKVPHSILLSLARDIGRDWDIDYELEI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLTIDLPV+GNFTIPLSTKGEIKLPT SD +
Sbjct: 121 GLTIDLPVIGNFTIPLSTKGEIKLPTFSDLW 151

[Close]

BLAST of MS005842 vs. ExPASy TrEMBL
Match: A0A6J1IDE4 (desiccation protectant protein Lea14 homolog OS=Cucurbita maxima OX=3661 GN=LOC111475126 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.9e-65
Identity = 124/151 (82.12%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MAGLID+AK +V+ KVANMPKPEASVTDVDFK LSRDS EYLA V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY LKSDGR +V+GTVPDPGSLKAS ST++EVGVKVPHS+++SL KDIGRDWDIDYEL I
Sbjct: 61  SYNLKSDGRTVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
            LTIDLPV+G+FTIPLSTKGEIKLPT SD F
Sbjct: 121 RLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 151

[Close]

BLAST of MS005842 vs. ExPASy TrEMBL
Match: A0A6J1EFH6 (desiccation protectant protein Lea14 homolog OS=Cucurbita moschata OX=3662 GN=LOC111432046 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.4e-64
Identity = 125/152 (82.24%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MA LIDKAK F+A+KVA++PKPEASVTDVDFK LS DS EYLA V+VSNPYS +IPICEI
Sbjct: 1   MADLIDKAKNFIADKVADIPKPEASVTDVDFKRLSCDSVEYLANVSVSNPYSCAIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SYTLKSDGRVI +GTVPDPGSLKASDST+LEV VKVPH++L+SLV+DIGRDWDIDYEL I
Sbjct: 61  SYTLKSDGRVIATGTVPDPGSLKASDSTMLEVAVKVPHTVLISLVRDIGRDWDIDYELQI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA 153
           GLTIDLPV+G+FTIPLSTKGE+KLPT SD FA
Sbjct: 121 GLTIDLPVIGSFTIPLSTKGEMKLPTFSDMFA 152

[Close]

BLAST of MS005842 vs. TAIR 10
Match: AT1G01470.1 (Late embryogenesis abundant protein )

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-58
Identity = 107/151 (70.86%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           MA L+DKAK+FVA+K+  +PKPE SVTDVD KD++RDS EYLAKV+V+NPYSHSIPICEI
Sbjct: 1   MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           S+T  S GR I  G +PDPGSLKA D T L++ V VP+SIL +L +D+G DWDIDYEL I
Sbjct: 61  SFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQI 120

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLTIDLPVVG FTIP+S+KGEIKLPT  DFF
Sbjct: 121 GLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151

[Close]

BLAST of MS005842 vs. TAIR 10
Match: AT2G46140.1 (Late embryogenesis abundant protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-51
Identity = 97/151 (64.24%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
           ++ L+DKAK F AEK+AN+P PEA+V DVDFK ++RD  +Y AKV+V NPYS SIPIC+I
Sbjct: 16  ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQI 75

Query: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELFI 120
           SY LKS  R I SGT+PDPGSL  S +T+L+V VKV +SI +SL+KD+  DWDIDY+L I
Sbjct: 76  SYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDI 135

Query: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 152
           GLT D+PVVG+ TIP+ST+GEIKLP++ DFF
Sbjct: 136 GLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 166

[Close]

BLAST of MS005842 vs. TAIR 10
Match: AT2G44060.1 (Late embryogenesis abundant protein, group 2 )

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19
Identity = 49/153 (32.03%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 3   GLIDKAKEFV------AEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIP 62
           G +DK K+F+       E      KP A V+ +    ++ + A+ +  V V NP    IP
Sbjct: 41  GFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIP 100

Query: 63  ICEISYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDY 122
           + +++Y ++SDGR +VSG +PD G+LKA     +++ + + +  + S   DI     I Y
Sbjct: 101 LIDVNYLVESDGRKLVSGLIPDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPY 160

Query: 123 ELFIGLTIDLPVVGNFTIPLSTKGEIKLPTISD 150
            + + L +D+PV+G  T+PL   GEI +P   D
Sbjct: 161 RIKVDLIVDVPVLGRLTLPLEKCGEIPIPKKPD 193

[Close]

BLAST of MS005842 vs. TAIR 10
Match: AT2G44060.2 (Late embryogenesis abundant protein, group 2 )

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19
Identity = 49/153 (32.03%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 3   GLIDKAKEFV------AEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIP 62
           G +DK K+F+       E      KP A V+ +    ++ + A+ +  V V NP    IP
Sbjct: 41  GFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIP 100

Query: 63  ICEISYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDY 122
           + +++Y ++SDGR +VSG +PD G+LKA     +++ + + +  + S   DI     I Y
Sbjct: 101 LIDVNYLVESDGRKLVSGLIPDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPY 160

Query: 123 ELFIGLTIDLPVVGNFTIPLSTKGEIKLPTISD 150
            + + L +D+PV+G  T+PL   GEI +P   D
Sbjct: 161 RIKVDLIVDVPVLGRLTLPLEKCGEIPIPKKPD 193

The following BLAST results are available for this feature:

BLAST of MS005842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147435.1	1.2e-76	99.34	desiccation protectant protein Lea14 homolog [Momordica charantia]	[more]
XP_022933415.1	3.7e-65	82.78	desiccation protectant protein Lea14 homolog [Cucurbita moschata] >KAG6597117.1 ...	[more]
XP_022147268.1	4.9e-65	84.77	desiccation protectant protein Lea14 homolog [Momordica charantia]	[more]
XP_023540601.1	1.1e-64	82.12	desiccation protectant protein Lea14 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022974652.1	1.8e-64	82.12	desiccation protectant protein Lea14 homolog [Cucurbita maxima] >XP_022975028.1 ...	[more]

BLAST of MS005842 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46519	2.8e-63	78.29	Desiccation protectant protein Lea14 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
P46518	1.1e-59	74.17	Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum OX=3635 GN=LEA...	[more]
O03983	3.0e-57	70.86	Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana OX=3702 GN=LE...	[more]
P22241	2.9e-52	66.89	Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum OX=4153 PE=2 ...	[more]
O82355	1.6e-50	64.24	Desiccation-related protein At2g46140 OS=Arabidopsis thaliana OX=3702 GN=At2g461...	[more]

BLAST of MS005842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D060	6.0e-77	99.34	desiccation protectant protein Lea14 homolog OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1F4U2	1.8e-65	82.78	desiccation protectant protein Lea14 homolog OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1D0U8	2.4e-65	84.77	desiccation protectant protein Lea14 homolog OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1IDE4	8.9e-65	82.12	desiccation protectant protein Lea14 homolog OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EFH6	4.4e-64	82.24	desiccation protectant protein Lea14 homolog OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MS005842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01470.1	2.1e-58	70.86	Late embryogenesis abundant protein	[more]
AT2G46140.1	1.1e-51	64.24	Late embryogenesis abundant protein	[more]
AT2G44060.1	1.5e-19	32.03	Late embryogenesis abundant protein, group 2	[more]
AT2G44060.2	1.5e-19	32.03	Late embryogenesis abundant protein, group 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013990	Water stress and hypersensitive response domain	SMART	SM00769	why	coord: 24..141 e-value: 4.4E-34 score: 129.2
None	No IPR available	GENE3D	2.60.40.1820		coord: 17..151 e-value: 1.5E-55 score: 188.6
None	No IPR available	PANTHER	PTHR31459:SF19	DESICCATION-RELATED PROTEIN LEA14-RELATED	coord: 1..151
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 3..150
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 44..140 e-value: 6.6E-17 score: 61.9
IPR045043	Late embryogenesis abundant protein Lea14-like	PANTHER	PTHR31459	FAMILY NOT NAMED	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005842.1	MS005842.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009269	response to desiccation