MS005838 (gene) Bitter gourd (TR) v1

Overview
NameMS005838
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold254: 1946678 .. 1947991 (-)
RNA-Seq ExpressionMS005838
SyntenyMS005838
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGCCATCACATTAACGCAATTGATCTCCAGGCTTTGTAGAAGTAGAAATACAGATCTTGCTTGGAATGTTTTAGATGATGTGATGAAGTTGAATGGTCTTAAGGATGTTGCACCCTGTAATGCGCTTTTGACAGGATTGGGAAAGGAGAGGGAATTTGAGAAAATGAATTTGCTAATGCGAAGGATGAAAGACATGGATATTCAGCCTAACGTTATAACTTTTGGTATTCTCATCAATCATTTGTGTAAGTTCAGAAGAATTGATGATGCGTTAGAGGTGTTTGAGAGGATGAAGGGGGAAAAGGAGGCTAAGGTTGTTGCACCTGATGCAATCACTTACAATACTTTGATTGATGGGCTCTGTAAAGTGGGGAGGCAAGAAGAAGGATCGAGTTTGATGAGAATGATGAGATCAGATGGCTGTGTTCCTAATACTGTTACCTATAATTGTTTGATTGATGGGTACTGTAAGTCAGGTGAAATTGAGAAAGCCCACGAGCTCTTTAATCAGATGGCTAATGAACAAGTTGTGCCAAATGTGATCACCCTCAATACTTTAGTTGATGGAATGTGCAAGCATGGCAGAATAAGTAGCGCAGTTGAGTTTCTCAGGGAAATGCAGCAGAAGGGATTGAAAGGAAATTCCGTTACTTACACAGTGTTTATCAATGCTTTTTGCAAAGTCAACAATATTGATAAGGCACTGGAGTTTTTTGATGAAATGTTCAAAGCTGGATGTTTCCCTGATTCCATTGTTTATTATACTCTGATATGTGGTTTGGCCCAAGCTGGAAGGTTGGATGATGCCAGCTTTGTCATGTCGAAGTTGAAGGAGGCCGGGTTTCGTCTGGATCTCGTTTGCTTCAATATTCTTATTAGTGAGTTCTGTAAGAGGAACAAATTAGATAAAGCTAATGAGTTGCTCAATGAAATGGAGCTGGTTGGAGTTAAGCCTGACAGTGTCACTTACAACACTTTGATTTCCTACTTCAGTAGAACTGGGAATTTCAAACTGGCCCACAAATTTATGAAAAGGATGACCAAGCATGAGGGTCTTTTACCCACTGTCTTCACTTATGGAGCTCTGATTCATGCATATTGTTTAAACAACAACACTGATGAAGCCATGAAGCTTTTCAAGGAAATGAGTGCAGCATCAAAGGTTCCTCCCAACACGGTAATATACAACATATTGATAGATTCTCTGTGCAAAAAAAACGAGGTCGATTCTGCTCTCTCTCTATTCGATGATATGAAAGTTCGAGGAGTGAAGCCCAACACCACAACATATAATGCTGTATTCAAAGCCCTT

mRNA sequence

AATGCCATCACATTAACGCAATTGATCTCCAGGCTTTGTAGAAGTAGAAATACAGATCTTGCTTGGAATGTTTTAGATGATGTGATGAAGTTGAATGGTCTTAAGGATGTTGCACCCTGTAATGCGCTTTTGACAGGATTGGGAAAGGAGAGGGAATTTGAGAAAATGAATTTGCTAATGCGAAGGATGAAAGACATGGATATTCAGCCTAACGTTATAACTTTTGGTATTCTCATCAATCATTTGTGTAAGTTCAGAAGAATTGATGATGCGTTAGAGGTGTTTGAGAGGATGAAGGGGGAAAAGGAGGCTAAGGTTGTTGCACCTGATGCAATCACTTACAATACTTTGATTGATGGGCTCTGTAAAGTGGGGAGGCAAGAAGAAGGATCGAGTTTGATGAGAATGATGAGATCAGATGGCTGTGTTCCTAATACTGTTACCTATAATTGTTTGATTGATGGGTACTGTAAGTCAGGTGAAATTGAGAAAGCCCACGAGCTCTTTAATCAGATGGCTAATGAACAAGTTGTGCCAAATGTGATCACCCTCAATACTTTAGTTGATGGAATGTGCAAGCATGGCAGAATAAGTAGCGCAGTTGAGTTTCTCAGGGAAATGCAGCAGAAGGGATTGAAAGGAAATTCCGTTACTTACACAGTGTTTATCAATGCTTTTTGCAAAGTCAACAATATTGATAAGGCACTGGAGTTTTTTGATGAAATGTTCAAAGCTGGATGTTTCCCTGATTCCATTGTTTATTATACTCTGATATGTGGTTTGGCCCAAGCTGGAAGGTTGGATGATGCCAGCTTTGTCATGTCGAAGTTGAAGGAGGCCGGGTTTCGTCTGGATCTCGTTTGCTTCAATATTCTTATTAGTGAGTTCTGTAAGAGGAACAAATTAGATAAAGCTAATGAGTTGCTCAATGAAATGGAGCTGGTTGGAGTTAAGCCTGACAGTGTCACTTACAACACTTTGATTTCCTACTTCAGTAGAACTGGGAATTTCAAACTGGCCCACAAATTTATGAAAAGGATGACCAAGCATGAGGGTCTTTTACCCACTGTCTTCACTTATGGAGCTCTGATTCATGCATATTGTTTAAACAACAACACTGATGAAGCCATGAAGCTTTTCAAGGAAATGAGTGCAGCATCAAAGGTTCCTCCCAACACGGTAATATACAACATATTGATAGATTCTCTGTGCAAAAAAAACGAGGTCGATTCTGCTCTCTCTCTATTCGATGATATGAAAGTTCGAGGAGTGAAGCCCAACACCACAACATATAATGCTGTATTCAAAGCCCTT

Coding sequence (CDS)

AATGCCATCACATTAACGCAATTGATCTCCAGGCTTTGTAGAAGTAGAAATACAGATCTTGCTTGGAATGTTTTAGATGATGTGATGAAGTTGAATGGTCTTAAGGATGTTGCACCCTGTAATGCGCTTTTGACAGGATTGGGAAAGGAGAGGGAATTTGAGAAAATGAATTTGCTAATGCGAAGGATGAAAGACATGGATATTCAGCCTAACGTTATAACTTTTGGTATTCTCATCAATCATTTGTGTAAGTTCAGAAGAATTGATGATGCGTTAGAGGTGTTTGAGAGGATGAAGGGGGAAAAGGAGGCTAAGGTTGTTGCACCTGATGCAATCACTTACAATACTTTGATTGATGGGCTCTGTAAAGTGGGGAGGCAAGAAGAAGGATCGAGTTTGATGAGAATGATGAGATCAGATGGCTGTGTTCCTAATACTGTTACCTATAATTGTTTGATTGATGGGTACTGTAAGTCAGGTGAAATTGAGAAAGCCCACGAGCTCTTTAATCAGATGGCTAATGAACAAGTTGTGCCAAATGTGATCACCCTCAATACTTTAGTTGATGGAATGTGCAAGCATGGCAGAATAAGTAGCGCAGTTGAGTTTCTCAGGGAAATGCAGCAGAAGGGATTGAAAGGAAATTCCGTTACTTACACAGTGTTTATCAATGCTTTTTGCAAAGTCAACAATATTGATAAGGCACTGGAGTTTTTTGATGAAATGTTCAAAGCTGGATGTTTCCCTGATTCCATTGTTTATTATACTCTGATATGTGGTTTGGCCCAAGCTGGAAGGTTGGATGATGCCAGCTTTGTCATGTCGAAGTTGAAGGAGGCCGGGTTTCGTCTGGATCTCGTTTGCTTCAATATTCTTATTAGTGAGTTCTGTAAGAGGAACAAATTAGATAAAGCTAATGAGTTGCTCAATGAAATGGAGCTGGTTGGAGTTAAGCCTGACAGTGTCACTTACAACACTTTGATTTCCTACTTCAGTAGAACTGGGAATTTCAAACTGGCCCACAAATTTATGAAAAGGATGACCAAGCATGAGGGTCTTTTACCCACTGTCTTCACTTATGGAGCTCTGATTCATGCATATTGTTTAAACAACAACACTGATGAAGCCATGAAGCTTTTCAAGGAAATGAGTGCAGCATCAAAGGTTCCTCCCAACACGGTAATATACAACATATTGATAGATTCTCTGTGCAAAAAAAACGAGGTCGATTCTGCTCTCTCTCTATTCGATGATATGAAAGTTCGAGGAGTGAAGCCCAACACCACAACATATAATGCTGTATTCAAAGCCCTT

Protein sequence

NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLMRRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDGLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDMKVRGVKPNTTTYNAVFKAL
Homology
BLAST of MS005838 vs. NCBI nr
Match: XP_022147524.1 (pentatricopeptide repeat-containing protein At5g28460 [Momordica charantia])

HSP 1 Score: 880.6 bits (2274), Expect = 5.8e-252
Identity = 435/438 (99.32%), Postives = 437/438 (99.77%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM
Sbjct: 268 NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 327

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG 120
           RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG
Sbjct: 328 RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG 387

Query: 121 LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN 180
           LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN
Sbjct: 388 LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN 447

Query: 181 VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFFD 240
           VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCK NNIDKA+EFFD
Sbjct: 448 VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKXNNIDKAMEFFD 507

Query: 241 EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN 300
           EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN
Sbjct: 508 EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN 567

Query: 301 KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY 360
           KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY
Sbjct: 568 KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY 627

Query: 361 GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDMK 420
           GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEV+SALSLFDDMK
Sbjct: 628 GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVNSALSLFDDMK 687

Query: 421 VRGVKPNTTTYNAVFKAL 439
           VRGVKPNTTTYNAVFKAL
Sbjct: 688 VRGVKPNTTTYNAVFKAL 705

BLAST of MS005838 vs. NCBI nr
Match: XP_023514674.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 767.3 bits (1980), Expect = 7.1e-218
Identity = 372/439 (84.74%), Postives = 405/439 (92.26%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N ITLTQLIS+LCRSRN DLAW+VLDD+M  NGLKD APCNALLTGLGKEREFEKMNLLM
Sbjct: 116 NPITLTQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLM 175

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK-EAKVVAPDAITYNTLID 120
           R+MKDM++QPNVITFGILINH+CKFR IDDALEVFE+MKGEK EAK VAPDAITYNTLID
Sbjct: 176 RKMKDMNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLID 235

Query: 121 GLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVP 180
           GLCKVGRQEEG  L+  MRSDGC PNTVTYNCLIDGYCK+G IE AH L+N+M NEQVVP
Sbjct: 236 GLCKVGRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIEPAHALYNEMVNEQVVP 295

Query: 181 NVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFF 240
           NVITLNTLVDGMCKHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFF
Sbjct: 296 NVITLNTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFF 355

Query: 241 DEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKR 300
           DEM KAGCFPD+IVYYTLICGLAQAGRLDDA+ V S++K AGFRLDLVC+N+LISEFCK+
Sbjct: 356 DEMSKAGCFPDAIVYYTLICGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKK 415

Query: 301 NKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFT 360
           NKLD+ANELL+EME+VG+KPDSVTYNTLISYFS+ GN +LA KFM++MTK   LLP+VFT
Sbjct: 416 NKLDEANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELAFKFMEKMTKEACLLPSVFT 475

Query: 361 YGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDM 420
           YGA+IHAYCLNNNTDEAMKLFKEMSA SKVPPNTVIYNILIDSLCK+NEV SAL+LFDDM
Sbjct: 476 YGAVIHAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDM 535

Query: 421 KVRGVKPNTTTYNAVFKAL 439
            V GVKPNTTTYNA+ K L
Sbjct: 536 NVNGVKPNTTTYNAILKGL 554

BLAST of MS005838 vs. NCBI nr
Match: KAG7025273.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 761.5 bits (1965), Expect = 3.9e-216
Identity = 370/439 (84.28%), Postives = 404/439 (92.03%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N ITLTQLIS+LCRSRN DLAW+VLDD+M  NGLKD APCNALLTGLGKEREFEKMNLLM
Sbjct: 116 NPITLTQLISKLCRSRNIDLAWSVLDDLMTRNGLKDAAPCNALLTGLGKEREFEKMNLLM 175

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK-EAKVVAPDAITYNTLID 120
           R+MKDM++QPNVITFGILINH+CK R IDDALEVFE+MKGEK EAK VAPDAITYNTLID
Sbjct: 176 RKMKDMNVQPNVITFGILINHMCKSRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLID 235

Query: 121 GLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVP 180
           GLCKVGRQEEG  L+  MRSDGC PNTVTYNCLIDGYCK+G IE AH L+++M NEQVVP
Sbjct: 236 GLCKVGRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVP 295

Query: 181 NVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFF 240
           NVITLNTLVDGMCKHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFF
Sbjct: 296 NVITLNTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFF 355

Query: 241 DEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKR 300
           DEM KAGCFPD+IVYYTLICGLAQAGRLDDA+ V S++K AGFRLDLVC+N+LISEFCK+
Sbjct: 356 DEMSKAGCFPDAIVYYTLICGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKK 415

Query: 301 NKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFT 360
           NKLD+ANELL+EME+VG+KPDSVTYNTLISYFS+ GN +LA KFM++MTK   LLP+VFT
Sbjct: 416 NKLDEANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFT 475

Query: 361 YGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDM 420
           YGA+IHAYCLNNNTDEAMKLFKEMSA SKVPPNTVIYNILIDSLCK+NEV SAL+LFDDM
Sbjct: 476 YGAVIHAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDM 535

Query: 421 KVRGVKPNTTTYNAVFKAL 439
            V GVKPNTTTYNA+ K L
Sbjct: 536 NVNGVKPNTTTYNAILKGL 554

BLAST of MS005838 vs. NCBI nr
Match: XP_022960097.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita moschata] >XP_022960098.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 758.8 bits (1958), Expect = 2.5e-215
Identity = 368/439 (83.83%), Postives = 403/439 (91.80%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N ITLTQLIS+LCRSRN DLAW+VLDD+M  NGLKD APCNALLTGLGKEREFEKMNLLM
Sbjct: 116 NPITLTQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLM 175

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK-EAKVVAPDAITYNTLID 120
           R+MKDM++QPNVITFGILINH+CKFR IDDALEVFE+MKGEK EAK VAPDAITYNTLID
Sbjct: 176 RKMKDMNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLID 235

Query: 121 GLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVP 180
           GLCKVGRQEEG  L+  MRSDGC PNTVTYNCLIDGYCK+G IE AH L+++M NEQVVP
Sbjct: 236 GLCKVGRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVP 295

Query: 181 NVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFF 240
           NVITLNTLVDGMCKHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFF
Sbjct: 296 NVITLNTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFF 355

Query: 241 DEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKR 300
           DEM KAGCFPD+IVYYTLICGLAQAGRLDDA+ V  ++K AGFRLDLVC+N+LISEFCK+
Sbjct: 356 DEMSKAGCFPDAIVYYTLICGLAQAGRLDDATSVALRMKAAGFRLDLVCYNLLISEFCKK 415

Query: 301 NKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFT 360
           NKLD+ANELL+EME+VG+KPDSVTYNTLISYFS+ GN +LA KFM++MTK   LLP+VFT
Sbjct: 416 NKLDEANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFT 475

Query: 361 YGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDM 420
           YGA+IHAYCL NNTDEAMKLFKEM+A SKVPPNTVIYNILIDSLCK+NEV SAL+LFDDM
Sbjct: 476 YGAVIHAYCLTNNTDEAMKLFKEMTATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDM 535

Query: 421 KVRGVKPNTTTYNAVFKAL 439
            V GVKPNTTTYNA+ K L
Sbjct: 536 NVNGVKPNTTTYNAILKGL 554

BLAST of MS005838 vs. NCBI nr
Match: XP_038898803.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Benincasa hispida] >XP_038898805.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Benincasa hispida] >XP_038898806.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Benincasa hispida] >XP_038898807.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 753.4 bits (1944), Expect = 1.1e-213
Identity = 369/439 (84.05%), Postives = 402/439 (91.57%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N ITLTQLI++LC +RNT+LAW+VLD+VM LNGLKD APCNALLTGLGK REFEKMNLLM
Sbjct: 117 NTITLTQLITKLCWNRNTNLAWDVLDNVMMLNGLKDAAPCNALLTGLGKAREFEKMNLLM 176

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK-EAKVVAPDAITYNTLID 120
           R+MKDM+IQPNVITFGILINHLCKFRRIDDALEVFE++K EK EAK VAPD I YNTLID
Sbjct: 177 RKMKDMNIQPNVITFGILINHLCKFRRIDDALEVFEKLKAEKEEAKDVAPDVIMYNTLID 236

Query: 121 GLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVP 180
           GLCKVGRQEEG  LM MMR D C PNTVTYNCLIDGYCKSGEIE+AHELFNQM +EQVVP
Sbjct: 237 GLCKVGRQEEGLRLMGMMRLDDCAPNTVTYNCLIDGYCKSGEIERAHELFNQMVSEQVVP 296

Query: 181 NVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFF 240
           N+IT+NTLV+GMC H RISSAVEF REMQQKGLKGNSVTYTVFINAFCKVNN++KA+EF+
Sbjct: 297 NIITVNTLVNGMCNHSRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNMNKAMEFW 356

Query: 241 DEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKR 300
           DEM K GC PD IVYYTLICGLAQAGRLDDA+ V+SKLKEAGF LDLVC+NILISEFCK+
Sbjct: 357 DEMSKDGCLPDVIVYYTLICGLAQAGRLDDANSVVSKLKEAGFCLDLVCYNILISEFCKK 416

Query: 301 NKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFT 360
            KLD+A ELLNEMELVGVKPD VTYNTLIS+FS+ GNFKLAH+FMK+MTK +GLLPTVFT
Sbjct: 417 KKLDRAYELLNEMELVGVKPDCVTYNTLISHFSKIGNFKLAHEFMKKMTKEDGLLPTVFT 476

Query: 361 YGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDM 420
           YGALIHAYCLNNNTDEAMKLFKEMSA SKVPPNTVIYNILIDSLCK+NEV+ ALSL DDM
Sbjct: 477 YGALIHAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVNYALSLLDDM 536

Query: 421 KVRGVKPNTTTYNAVFKAL 439
           K R VKPNTTTYN +F+AL
Sbjct: 537 KFRRVKPNTTTYNTIFEAL 555

BLAST of MS005838 vs. ExPASy Swiss-Prot
Match: Q9LKU8 (Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana OX=3702 GN=At5g28460 PE=2 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.1e-126
Identity = 219/441 (49.66%), Postives = 315/441 (71.43%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N++ LT+ IS LC++   + AW++L D+MK     +  P NALL+ LG+  +  +MN L+
Sbjct: 258 NSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK--EAKVVAPDAITYNTLI 120
            +M ++ I+P+V+T GILIN LCK RR+D+ALEVFE+M+G++  +  V+  D+I +NTLI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377

Query: 121 DGLCKVGRQEEGSSLM-RMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQV 180
           DGLCKVGR +E   L+ RM   + CVPN VTYNCLIDGYC++G++E A E+ ++M  +++
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437

Query: 181 VPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALE 240
            PNV+T+NT+V GMC+H  ++ AV F  +M+++G+KGN VTY   I+A C V+N++KA+ 
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497

Query: 241 FFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFC 300
           ++++M +AGC PD+ +YY LI GL Q  R  DA  V+ KLKE GF LDL+ +N+LI  FC
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557

Query: 301 KRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTV 360
            +N  +K  E+L +ME  G KPDS+TYNTLIS+F +  +F+   + M++M + +GL PTV
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTV 617

Query: 361 FTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFD 420
            TYGA+I AYC     DEA+KLFK+M   SKV PNTVIYNILI++  K      ALSL +
Sbjct: 618 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 677

Query: 421 DMKVRGVKPNTTTYNAVFKAL 439
           +MK++ V+PN  TYNA+FK L
Sbjct: 678 EMKMKMVRPNVETYNALFKCL 697

BLAST of MS005838 vs. ExPASy Swiss-Prot
Match: Q9M316 (Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g61520 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-125
Identity = 218/441 (49.43%), Postives = 314/441 (71.20%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N++ LT+ IS LC++   + AW++L D+MK     +  P NALL+ LG+  +  +MN L+
Sbjct: 258 NSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK--EAKVVAPDAITYNTLI 120
            +M ++ I+P+V+T GILIN LCK RR+D+ALEVFE+M+G++  +  V+  D+I +NTLI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLI 377

Query: 121 DGLCKVGRQEEGSSLM-RMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQV 180
           DGLCKVGR +E   L+ RM   + C PN VTYNCLIDGYC++G++E A E+ ++M  +++
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437

Query: 181 VPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALE 240
            PNV+T+NT+V GMC+H  ++ AV F  +M+++G+KGN VTY   I+A C V+N++KA+ 
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497

Query: 241 FFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFC 300
           ++++M +AGC PD+ +YY LI GL Q  R  DA  V+ KLKE GF LDL+ +N+LI  FC
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557

Query: 301 KRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTV 360
            +N  +K  E+L +ME  G KPDS+TYNTLIS+F +  +F+   + M++M + +GL PTV
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTV 617

Query: 361 FTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFD 420
            TYGA+I AYC     DEA+KLFK+M   SKV PNTVIYNILI++  K      ALSL +
Sbjct: 618 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 677

Query: 421 DMKVRGVKPNTTTYNAVFKAL 439
           +MK++ V+PN  TYNA+FK L
Sbjct: 678 EMKMKMVRPNVETYNALFKCL 697

BLAST of MS005838 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.7e-66
Identity = 142/438 (32.42%), Postives = 236/438 (53.88%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N  TL+ +I+  CR R   LA++ +  ++KL    +    + L+ GL  E    +   L+
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG 120
            RM +M  +P++IT   L+N LC   +  +A+ + ++M          P+A+TY  +++ 
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM----VEYGCQPNAVTYGPVLNV 241

Query: 121 LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN 180
           +CK G+      L+R M       + V Y+ +IDG CK G ++ A  LFN+M  + +  N
Sbjct: 242 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 301

Query: 181 VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFFD 240
           +IT N L+ G C  GR     + LR+M ++ +  N VT++V I++F K   + +A E   
Sbjct: 302 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 361

Query: 241 EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN 300
           EM   G  PD+I Y +LI G  +   LD A+ ++  +   G   ++  FNILI+ +CK N
Sbjct: 362 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 421

Query: 301 KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY 360
           ++D   EL  +M L GV  D+VTYNTLI  F   G   +A +  + M   + + P + TY
Sbjct: 422 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTY 481

Query: 361 GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDMK 420
             L+   C N  +++A+++F+++   SK+  +  IYNI+I  +C  ++VD A  LF  + 
Sbjct: 482 KILLDGLCDNGESEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 541

Query: 421 VRGVKPNTTTYNAVFKAL 439
           ++GVKP   TYN +   L
Sbjct: 542 LKGVKPGVKTYNIMIGGL 553

BLAST of MS005838 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.2e-65
Identity = 133/399 (33.33%), Postives = 222/399 (55.64%), Query Frame = 0

Query: 41  NALLTG-LGKEREFEKMNLLMRRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMK 100
           NA+L   +  +R       + + M +  + PNV T+ ILI   C    ID AL +F++M 
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM- 232

Query: 101 GEKEAKVVAPDAITYNTLIDGLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKS 160
              E K   P+ +TYNTLIDG CK+ + ++G  L+R M   G  PN ++YN +I+G C+ 
Sbjct: 233 ---ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 292

Query: 161 GEIEKAHELFNQMANEQVVPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTY 220
           G +++   +  +M       + +T NTL+ G CK G    A+    EM + GL  + +TY
Sbjct: 293 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 352

Query: 221 TVFINAFCKVNNIDKALEFFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKE 280
           T  I++ CK  N+++A+EF D+M   G  P+   Y TL+ G +Q G +++A  V+ ++ +
Sbjct: 353 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 412

Query: 281 AGFRLDLVCFNILISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKL 340
            GF   +V +N LI+  C   K++ A  +L +M+  G+ PD V+Y+T++S F R+ +   
Sbjct: 413 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 472

Query: 341 AHKFMKRMTKHEGLLPTVFTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNIL 400
           A + +KR    +G+ P   TY +LI  +C    T EA  L++EM     +PP+   Y  L
Sbjct: 473 ALR-VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG-LPPDEFTYTAL 532

Query: 401 IDSLCKKNEVDSALSLFDDMKVRGVKPNTTTYNAVFKAL 439
           I++ C + +++ AL L ++M  +GV P+  TY+ +   L
Sbjct: 533 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565

BLAST of MS005838 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.9e-65
Identity = 145/434 (33.41%), Postives = 221/434 (50.92%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N  T + LI+  CR     LA  VL  +MKL    D+   N+LL G            L+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG 120
            +M +M  QP+  TF  LI+ L +  R  +A+ + +RM      K   PD +TY  +++G
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM----VVKGCQPDLVTYGIVVNG 234

Query: 121 LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN 180
           LCK G  +   SL++ M      P  V YN +ID  C    +  A  LF +M N+ + PN
Sbjct: 235 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 294

Query: 181 VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFFD 240
           V+T N+L+  +C +GR S A   L +M ++ +  N VT++  I+AF K   + +A + +D
Sbjct: 295 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 354

Query: 241 EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN 300
           EM K    PD   Y +LI G     RLD+A  +   +       ++V +N LI  FCK  
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 414

Query: 301 KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY 360
           ++D+  EL  EM   G+  ++VTY TLI  F +      A    K+M   +G+LP + TY
Sbjct: 415 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTY 474

Query: 361 GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDMK 420
             L+   C N   + A+ +F E    SK+ P+   YNI+I+ +CK  +V+    LF  + 
Sbjct: 475 SILLDGLCNNGKVETALVVF-EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 534

Query: 421 VRGVKPNTTTYNAV 435
           ++GVKPN  TY  +
Sbjct: 535 LKGVKPNVVTYTTM 542

BLAST of MS005838 vs. ExPASy TrEMBL
Match: A0A6J1D191 (pentatricopeptide repeat-containing protein At5g28460 OS=Momordica charantia OX=3673 GN=LOC111016427 PE=4 SV=1)

HSP 1 Score: 880.6 bits (2274), Expect = 2.8e-252
Identity = 435/438 (99.32%), Postives = 437/438 (99.77%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM
Sbjct: 268 NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 327

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG 120
           RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG
Sbjct: 328 RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG 387

Query: 121 LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN 180
           LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN
Sbjct: 388 LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN 447

Query: 181 VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFFD 240
           VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCK NNIDKA+EFFD
Sbjct: 448 VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKXNNIDKAMEFFD 507

Query: 241 EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN 300
           EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN
Sbjct: 508 EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN 567

Query: 301 KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY 360
           KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY
Sbjct: 568 KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY 627

Query: 361 GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDMK 420
           GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEV+SALSLFDDMK
Sbjct: 628 GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVNSALSLFDDMK 687

Query: 421 VRGVKPNTTTYNAVFKAL 439
           VRGVKPNTTTYNAVFKAL
Sbjct: 688 VRGVKPNTTTYNAVFKAL 705

BLAST of MS005838 vs. ExPASy TrEMBL
Match: A0A6J1H7V3 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111460949 PE=4 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 1.2e-215
Identity = 368/439 (83.83%), Postives = 403/439 (91.80%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N ITLTQLIS+LCRSRN DLAW+VLDD+M  NGLKD APCNALLTGLGKEREFEKMNLLM
Sbjct: 116 NPITLTQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLM 175

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK-EAKVVAPDAITYNTLID 120
           R+MKDM++QPNVITFGILINH+CKFR IDDALEVFE+MKGEK EAK VAPDAITYNTLID
Sbjct: 176 RKMKDMNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLID 235

Query: 121 GLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVP 180
           GLCKVGRQEEG  L+  MRSDGC PNTVTYNCLIDGYCK+G IE AH L+++M NEQVVP
Sbjct: 236 GLCKVGRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVP 295

Query: 181 NVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFF 240
           NVITLNTLVDGMCKHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFF
Sbjct: 296 NVITLNTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFF 355

Query: 241 DEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKR 300
           DEM KAGCFPD+IVYYTLICGLAQAGRLDDA+ V  ++K AGFRLDLVC+N+LISEFCK+
Sbjct: 356 DEMSKAGCFPDAIVYYTLICGLAQAGRLDDATSVALRMKAAGFRLDLVCYNLLISEFCKK 415

Query: 301 NKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFT 360
           NKLD+ANELL+EME+VG+KPDSVTYNTLISYFS+ GN +LA KFM++MTK   LLP+VFT
Sbjct: 416 NKLDEANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFT 475

Query: 361 YGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDM 420
           YGA+IHAYCL NNTDEAMKLFKEM+A SKVPPNTVIYNILIDSLCK+NEV SAL+LFDDM
Sbjct: 476 YGAVIHAYCLTNNTDEAMKLFKEMTATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDM 535

Query: 421 KVRGVKPNTTTYNAVFKAL 439
            V GVKPNTTTYNA+ K L
Sbjct: 536 NVNGVKPNTTTYNAILKGL 554

BLAST of MS005838 vs. ExPASy TrEMBL
Match: A0A6J1KTL0 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498105 PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 3.3e-213
Identity = 366/439 (83.37%), Postives = 399/439 (90.89%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N ITLTQLIS+LCRSRN DLAW+VLDD+M  NGLKD APCNALLTGLGKE EFEKMNLLM
Sbjct: 116 NPITLTQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEMEFEKMNLLM 175

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK-EAKVVAPDAITYNTLID 120
           R+MKDM++QPNVITF ILINH+CKFR IDDALEVFE+MKGEK EAK VAPDAITYNTLID
Sbjct: 176 RKMKDMNVQPNVITFSILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLID 235

Query: 121 GLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVP 180
           GLCKVGRQEEG  L+  MRSDGC PNTVTYNCLIDGYCK+G IE AH L+N+M NEQVVP
Sbjct: 236 GLCKVGRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGTIETAHALYNEMVNEQVVP 295

Query: 181 NVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFF 240
           NVITLNTLVDGMCKHGRISSAVEF  EMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFF
Sbjct: 296 NVITLNTLVDGMCKHGRISSAVEFFMEMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFF 355

Query: 241 DEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKR 300
           DEM KAGCFPD+IVYY LI GLAQAGRLDDA+ V S++K AGFRLDLVC+N+LISEFCK+
Sbjct: 356 DEMSKAGCFPDAIVYYPLIFGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKK 415

Query: 301 NKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFT 360
           NKLD+ANELL+EME+VG+KPD VTYNTLISYFS+ GN +LA KFM++MTK   LLP+VFT
Sbjct: 416 NKLDEANELLDEMEVVGIKPDIVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFT 475

Query: 361 YGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDM 420
           YGA+IHAYCLNNNTDEAMKLFKEMSA SKVPPNTVIYNILIDSLCK+NEV SAL+LFDDM
Sbjct: 476 YGAVIHAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDM 535

Query: 421 KVRGVKPNTTTYNAVFKAL 439
            V GVKPNTTTYNA+ K L
Sbjct: 536 NVNGVKPNTTTYNAILKGL 554

BLAST of MS005838 vs. ExPASy TrEMBL
Match: A0A0A0K547 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336570 PE=4 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 1.4e-203
Identity = 353/441 (80.05%), Postives = 391/441 (88.66%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           + I LTQLIS+LCRS NT+LAWN+LD++M LNGLKD APCNALLTGLGK REF KMNLLM
Sbjct: 116 DTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLM 175

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK-EAKV-VAPDAITYNTLI 120
           R+MKDM+IQP VITFGILINHLCKFRRIDDALEVFE+MKGEK E KV VAPD I YNTLI
Sbjct: 176 RKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLI 235

Query: 121 DGLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVV 180
           DGLCKVGRQEE   LM  MRSD C P T T+NCLI+GYC+SGEIE AH+LFN+M N Q+ 
Sbjct: 236 DGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIE 295

Query: 181 PNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEF 240
           PNVITLNTLVDGMCKH RIS+AVEF R MQQKGLKGN+VTYTVFINAFC VNN++KA+EF
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEF 355

Query: 241 FDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCK 300
            DEM K GCFPD++VYYTLICGLAQAGRLDDAS V+SKLKEAGF LD VC+N+LISEFCK
Sbjct: 356 LDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCK 415

Query: 301 RNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVF 360
           +NKLD+A E LNEMEL GVKPDSVTYNTLISYFS+ GNFKLAHKFMK+MT+ EGL PTVF
Sbjct: 416 KNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVF 475

Query: 361 TYGALIHAYCLNNNTDEAMKLFKEM-SAASKVPPNTVIYNILIDSLCKKNEVDSALSLFD 420
           TYGALIHAYCLNNN DEA+K+FKEM + ASKVPPNTVIYNILIDSLCK+ +V+ ALSL D
Sbjct: 476 TYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLD 535

Query: 421 DMKVRGVKPNTTTYNAVFKAL 439
           DMK RGV PNTTTYN++FKAL
Sbjct: 536 DMKFRGVMPNTTTYNSIFKAL 556

BLAST of MS005838 vs. ExPASy TrEMBL
Match: A0A1S3BGI7 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103489753 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.2e-202
Identity = 346/440 (78.64%), Postives = 392/440 (89.09%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           + I LTQLIS+LCRS NT+LAWN+LD++M LNGLKD APCNALLTGLGK REF KMNLLM
Sbjct: 116 DTIALTQLISKLCRSGNTNLAWNILDNMMMLNGLKDAAPCNALLTGLGKAREFGKMNLLM 175

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAK--VVAPDAITYNTLI 120
           R+MKDM+IQP VITFGILIN+LCKFRRIDDALEVFE+MKGEKE    VVAPD I YNTLI
Sbjct: 176 RKMKDMNIQPTVITFGILINYLCKFRRIDDALEVFEKMKGEKEEAEVVVAPDTIMYNTLI 235

Query: 121 DGLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVV 180
           DGLCKVGRQEEG  LM  MRS  C P T TYNCLI+GYC++GEIE A++LF++M +EQ+ 
Sbjct: 236 DGLCKVGRQEEGLRLMGTMRSGQCAPTTATYNCLINGYCRAGEIEVANKLFSEMVSEQIE 295

Query: 181 PNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEF 240
           PNVITLNTLVDGMCKH RIS+AV+F R+MQQKGLKGN+VTYTVFINAFC VNN++KA+EF
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVKFFRDMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEF 355

Query: 241 FDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCK 300
            DEM K GCFPD++VYYTLICGLA+AGRLDD+S V+SKLKEAGF LD VC+N+LISEFCK
Sbjct: 356 LDEMSKDGCFPDAVVYYTLICGLARAGRLDDSSSVVSKLKEAGFFLDRVCYNVLISEFCK 415

Query: 301 RNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVF 360
           +NKLD+A E LN+MEL GVKPDSVTYNTLISYFS+ GNFKLAHKFMK+MT+ +GL PTVF
Sbjct: 416 KNKLDRAQEWLNQMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEDGLSPTVF 475

Query: 361 TYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDD 420
           TYGALIHAYCLNNN DEA+KLFKEM+ ASKVPPNTVIYNILIDSLCK+ EV+ ALSL DD
Sbjct: 476 TYGALIHAYCLNNNIDEAIKLFKEMNVASKVPPNTVIYNILIDSLCKQTEVNFALSLLDD 535

Query: 421 MKVRGVKPNTTTYNAVFKAL 439
           MK RGV PNTTTYN++FKAL
Sbjct: 536 MKFRGVMPNTTTYNSIFKAL 555

BLAST of MS005838 vs. TAIR 10
Match: AT5G28370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 452.6 bits (1163), Expect = 3.6e-127
Identity = 219/441 (49.66%), Postives = 315/441 (71.43%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N++ LT+ IS LC++   + AW++L D+MK     +  P NALL+ LG+  +  +MN L+
Sbjct: 258 NSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK--EAKVVAPDAITYNTLI 120
            +M ++ I+P+V+T GILIN LCK RR+D+ALEVFE+M+G++  +  V+  D+I +NTLI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377

Query: 121 DGLCKVGRQEEGSSLM-RMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQV 180
           DGLCKVGR +E   L+ RM   + CVPN VTYNCLIDGYC++G++E A E+ ++M  +++
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437

Query: 181 VPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALE 240
            PNV+T+NT+V GMC+H  ++ AV F  +M+++G+KGN VTY   I+A C V+N++KA+ 
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497

Query: 241 FFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFC 300
           ++++M +AGC PD+ +YY LI GL Q  R  DA  V+ KLKE GF LDL+ +N+LI  FC
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557

Query: 301 KRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTV 360
            +N  +K  E+L +ME  G KPDS+TYNTLIS+F +  +F+   + M++M + +GL PTV
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTV 617

Query: 361 FTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFD 420
            TYGA+I AYC     DEA+KLFK+M   SKV PNTVIYNILI++  K      ALSL +
Sbjct: 618 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 677

Query: 421 DMKVRGVKPNTTTYNAVFKAL 439
           +MK++ V+PN  TYNA+FK L
Sbjct: 678 EMKMKMVRPNVETYNALFKCL 697

BLAST of MS005838 vs. TAIR 10
Match: AT5G28460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 452.6 bits (1163), Expect = 3.6e-127
Identity = 219/441 (49.66%), Postives = 315/441 (71.43%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N++ LT+ IS LC++   + AW++L D+MK     +  P NALL+ LG+  +  +MN L+
Sbjct: 258 NSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK--EAKVVAPDAITYNTLI 120
            +M ++ I+P+V+T GILIN LCK RR+D+ALEVFE+M+G++  +  V+  D+I +NTLI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377

Query: 121 DGLCKVGRQEEGSSLM-RMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQV 180
           DGLCKVGR +E   L+ RM   + CVPN VTYNCLIDGYC++G++E A E+ ++M  +++
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437

Query: 181 VPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALE 240
            PNV+T+NT+V GMC+H  ++ AV F  +M+++G+KGN VTY   I+A C V+N++KA+ 
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497

Query: 241 FFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFC 300
           ++++M +AGC PD+ +YY LI GL Q  R  DA  V+ KLKE GF LDL+ +N+LI  FC
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557

Query: 301 KRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTV 360
            +N  +K  E+L +ME  G KPDS+TYNTLIS+F +  +F+   + M++M + +GL PTV
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTV 617

Query: 361 FTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFD 420
            TYGA+I AYC     DEA+KLFK+M   SKV PNTVIYNILI++  K      ALSL +
Sbjct: 618 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 677

Query: 421 DMKVRGVKPNTTTYNAVFKAL 439
           +MK++ V+PN  TYNA+FK L
Sbjct: 678 EMKMKMVRPNVETYNALFKCL 697

BLAST of MS005838 vs. TAIR 10
Match: AT3G61520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 451.4 bits (1160), Expect = 8.0e-127
Identity = 218/441 (49.43%), Postives = 314/441 (71.20%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N++ LT+ IS LC++   + AW++L D+MK     +  P NALL+ LG+  +  +MN L+
Sbjct: 258 NSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEK--EAKVVAPDAITYNTLI 120
            +M ++ I+P+V+T GILIN LCK RR+D+ALEVFE+M+G++  +  V+  D+I +NTLI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLI 377

Query: 121 DGLCKVGRQEEGSSLM-RMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQV 180
           DGLCKVGR +E   L+ RM   + C PN VTYNCLIDGYC++G++E A E+ ++M  +++
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437

Query: 181 VPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALE 240
            PNV+T+NT+V GMC+H  ++ AV F  +M+++G+KGN VTY   I+A C V+N++KA+ 
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497

Query: 241 FFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFC 300
           ++++M +AGC PD+ +YY LI GL Q  R  DA  V+ KLKE GF LDL+ +N+LI  FC
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557

Query: 301 KRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTV 360
            +N  +K  E+L +ME  G KPDS+TYNTLIS+F +  +F+   + M++M + +GL PTV
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTV 617

Query: 361 FTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFD 420
            TYGA+I AYC     DEA+KLFK+M   SKV PNTVIYNILI++  K      ALSL +
Sbjct: 618 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 677

Query: 421 DMKVRGVKPNTTTYNAVFKAL 439
           +MK++ V+PN  TYNA+FK L
Sbjct: 678 EMKMKMVRPNVETYNALFKCL 697

BLAST of MS005838 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 1.9e-67
Identity = 142/438 (32.42%), Postives = 236/438 (53.88%), Query Frame = 0

Query: 1   NAITLTQLISRLCRSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLM 60
           N  TL+ +I+  CR R   LA++ +  ++KL    +    + L+ GL  E    +   L+
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181

Query: 61  RRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMKGEKEAKVVAPDAITYNTLIDG 120
            RM +M  +P++IT   L+N LC   +  +A+ + ++M          P+A+TY  +++ 
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM----VEYGCQPNAVTYGPVLNV 241

Query: 121 LCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPN 180
           +CK G+      L+R M       + V Y+ +IDG CK G ++ A  LFN+M  + +  N
Sbjct: 242 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 301

Query: 181 VITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKVNNIDKALEFFD 240
           +IT N L+ G C  GR     + LR+M ++ +  N VT++V I++F K   + +A E   
Sbjct: 302 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 361

Query: 241 EMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRN 300
           EM   G  PD+I Y +LI G  +   LD A+ ++  +   G   ++  FNILI+ +CK N
Sbjct: 362 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 421

Query: 301 KLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTY 360
           ++D   EL  +M L GV  D+VTYNTLI  F   G   +A +  + M   + + P + TY
Sbjct: 422 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTY 481

Query: 361 GALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVDSALSLFDDMK 420
             L+   C N  +++A+++F+++   SK+  +  IYNI+I  +C  ++VD A  LF  + 
Sbjct: 482 KILLDGLCDNGESEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 541

Query: 421 VRGVKPNTTTYNAVFKAL 439
           ++GVKP   TYN +   L
Sbjct: 542 LKGVKPGVKTYNIMIGGL 553

BLAST of MS005838 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-66
Identity = 133/399 (33.33%), Postives = 222/399 (55.64%), Query Frame = 0

Query: 41  NALLTG-LGKEREFEKMNLLMRRMKDMDIQPNVITFGILINHLCKFRRIDDALEVFERMK 100
           NA+L   +  +R       + + M +  + PNV T+ ILI   C    ID AL +F++M 
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM- 232

Query: 101 GEKEAKVVAPDAITYNTLIDGLCKVGRQEEGSSLMRMMRSDGCVPNTVTYNCLIDGYCKS 160
              E K   P+ +TYNTLIDG CK+ + ++G  L+R M   G  PN ++YN +I+G C+ 
Sbjct: 233 ---ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 292

Query: 161 GEIEKAHELFNQMANEQVVPNVITLNTLVDGMCKHGRISSAVEFLREMQQKGLKGNSVTY 220
           G +++   +  +M       + +T NTL+ G CK G    A+    EM + GL  + +TY
Sbjct: 293 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 352

Query: 221 TVFINAFCKVNNIDKALEFFDEMFKAGCFPDSIVYYTLICGLAQAGRLDDASFVMSKLKE 280
           T  I++ CK  N+++A+EF D+M   G  P+   Y TL+ G +Q G +++A  V+ ++ +
Sbjct: 353 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 412

Query: 281 AGFRLDLVCFNILISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSRTGNFKL 340
            GF   +V +N LI+  C   K++ A  +L +M+  G+ PD V+Y+T++S F R+ +   
Sbjct: 413 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 472

Query: 341 AHKFMKRMTKHEGLLPTVFTYGALIHAYCLNNNTDEAMKLFKEMSAASKVPPNTVIYNIL 400
           A + +KR    +G+ P   TY +LI  +C    T EA  L++EM     +PP+   Y  L
Sbjct: 473 ALR-VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG-LPPDEFTYTAL 532

Query: 401 IDSLCKKNEVDSALSLFDDMKVRGVKPNTTTYNAVFKAL 439
           I++ C + +++ AL L ++M  +GV P+  TY+ +   L
Sbjct: 533 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022147524.15.8e-25299.32pentatricopeptide repeat-containing protein At5g28460 [Momordica charantia][more]
XP_023514674.17.1e-21884.74pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... [more]
KAG7025273.13.9e-21684.28Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022960097.12.5e-21583.83pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... [more]
XP_038898803.11.1e-21384.05pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Benin... [more]
Match NameE-valueIdentityDescription
Q9LKU85.1e-12649.66Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana OX... [more]
Q9M3161.1e-12549.43Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidop... [more]
Q0WKV32.7e-6632.42Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9FIX32.2e-6533.33Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9CAN02.9e-6533.41Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1D1912.8e-25299.32pentatricopeptide repeat-containing protein At5g28460 OS=Momordica charantia OX=... [more]
A0A6J1H7V31.2e-21583.83pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... [more]
A0A6J1KTL03.3e-21383.37pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... [more]
A0A0A0K5471.4e-20380.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336570 PE=4 SV=1[more]
A0A1S3BGI71.2e-20278.64pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
AT5G28370.13.6e-12749.66Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G28460.13.6e-12749.66Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G61520.18.0e-12749.43Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12300.11.9e-6732.42Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G39710.11.6e-6633.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 215..262
e-value: 6.6E-13
score: 48.7
coord: 285..328
e-value: 8.1E-14
score: 51.6
coord: 391..438
e-value: 2.5E-18
score: 66.0
coord: 144..193
e-value: 8.7E-19
score: 67.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 67..99
e-value: 1.1E-10
score: 41.0
coord: 352..384
e-value: 1.8E-12
score: 46.7
coord: 108..138
e-value: 2.5E-9
score: 36.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 394..428
e-value: 2.6E-11
score: 41.0
coord: 40..72
e-value: 7.3E-6
score: 23.8
coord: 253..285
e-value: 8.4E-5
score: 20.5
coord: 358..392
e-value: 2.1E-8
score: 31.8
coord: 147..181
e-value: 7.8E-12
score: 42.6
coord: 73..101
e-value: 2.9E-6
score: 25.1
coord: 287..321
e-value: 1.8E-7
score: 28.9
coord: 322..356
e-value: 9.3E-7
score: 26.7
coord: 182..215
e-value: 1.0E-7
score: 29.7
coord: 112..146
e-value: 7.3E-10
score: 36.4
coord: 217..251
e-value: 5.9E-11
score: 39.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 180..214
score: 11.980759
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 71..105
score: 10.259834
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 285..319
score: 11.849223
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 110..144
score: 13.493418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 36..70
score: 9.624079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 250..284
score: 9.952918
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 356..390
score: 11.597113
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 145..179
score: 14.10725
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 320..355
score: 10.248873
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 215..249
score: 13.26323
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..426
score: 13.416689
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..103
e-value: 4.6E-21
score: 77.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 244..313
e-value: 1.1E-16
score: 62.9
coord: 314..386
e-value: 2.3E-20
score: 74.9
coord: 104..174
e-value: 5.5E-27
score: 96.5
coord: 175..243
e-value: 3.3E-22
score: 80.9
coord: 387..438
e-value: 1.9E-15
score: 58.9
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 2..438
NoneNo IPR availablePANTHERPTHR47942:SF64F21B23.6 PROTEINcoord: 2..438
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 149..417

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS005838.1MS005838.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding