MS005811 (gene) Bitter gourd (TR) v1

Overview


Name	MS005811
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	scaffold254: 1755783 .. 1757654 (-)
RNA-Seq Expression	MS005811
Synteny	MS005811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATTTGCTTCCCACGACGTTCTCCTCTCCTTCCCATCTTCTTTCTGATCGTAATCGCCGTCGGAATTTTCAAGGATGCCGGTTTTAATCGCTTAGTTGAGGGTGGACAGCGGCGAATCCACATTACCGATGATCTCGACGACGTGGTCGACGAGGAGGAGGATGAATCTTGGAAGGAATGGGGCAAGAAAAAGACGTCCTCCAGCAATTTCGACTTGCCGGCCGCCGATTTGTCGAAGATGGAGATTTCGGAGATTCAGGCTGAGATGATCAAGCGGCGTTCAGGTCCGGCTATGGGATTTGTGAAGCTTCGGCTGGGCGTTCGCCGGACTGCGGTAAGAAAGTATTTCTACATTCTCCTTCCGGAAAGTGCTACACAATCTGACTCCGCTAGTCAATCGGTTCCGGTACTGAAATGATTTTAAATTTCGAATGCAACTCGAATCTGATTTTAGGACAGGGAATCTGTTTAACTGATGCTGAAGTTGGAACGAAAAACCTTGAAAATCTGGAAGAAAGCGGTAGTACAATTTAAACGATGTGTTTTCTGTTAATTGGAATTGTATATGGCTTATAATTGGAAAATTCGGCGATTAACGTCTTCGTATGATAGCGTTTTACCAGCATTTTTGGCTCTTGATTTCAGGACTTGGTGGCTGACATTGCTATCCAGTGGACGAAAGTTCTCAAAACTGGATCCGTTGAGGCACATTTTATGGCGGTCGACCTTAATACACTCATGTTCACGATGAGCAGAGGGCAAGACATAGATGAGGTACACTACTTCAATTACCAAAATCTGAAACTGAGACTCATCAATTGCTCTCCAATTTGTCTGAAAGAATAGTTTTTACACCTAGCTTTGGTAGTTGTGATCTAATTCGAAAGCCCTATATTCAATTCCTATCAAGTTAATCAGTTCCGGAACATATTAATCTTGTCATTTAAGTTCGATCATAATTTTTTTTTATATGACTGATTCTGTTTTTGTATTATCAAACTCCCACATTTACATTGAGTAGATACAGATGGGAAGAACAACTTAGGTTCCAGCCTCCATTGACTGGGTCATTTTTTAACATTTCGTTGATATCACATTTCGAAAATAAGTAGATTCTAGAAATGTTTCACATTAGAACATAGGTCGAGCTCAAATTTTCCTCTACCATATTAAGTAATTACGTTTCCTTATTTTTGGTGGTTTTCTAGTAGACCCATAATCCATTTAATAAATAGAACGTGTAAAAACCGACCATATAAGGAATTGAGGATGAGCTCAAATGGTGAAGTTGTTGTGTTGTAACCTAAATAAGTTGTTTGTTAAGGACTAGCTTCTTGATTCCACTTTTTACTCAGAAAACTCGTTGGATAGAACACCTTTTCCCCCATTATATGCAAAACTACAGTATTTTTCAATGTTTATCACTCAAATTTATGGTACTGCAGACTAATAAAAACAAAAATGTAGTACCAAGAACATTATTCCTCACACCTAGTTTTGATCATCTCTGTTCTGGGCTGTTCCTCTGTTTTGATTTTCGGAAAGTAACCCATCAAACATAACTTCCTAAGTAAATCAAACAATTCATTGCTCCTCAAAATGGGAACGATATCGAGAATAGCTTTTCGAATTCATTCTTCTCAACTTTTTTTTCTCTTTTTGGTAATGTTATTTTACATTGTGAGAGCAGTTGAAGGAGTATGTGTTGAGGCAGCCAGAGTCATACGAGATCAAAATTGGGGACCAAGTATTTCGAAGGCCTGGAGATCCTCCTCTGCAGGAAGTCATTGAGATGCTCCGGAAAGATAAGAACAAAGCTGAAGACACCAATCCTTCAGAAAATGTTGAGCCATTGCACCAGGAATTG

mRNA sequence

ATGAGAATTTGCTTCCCACGACGTTCTCCTCTCCTTCCCATCTTCTTTCTGATCGTAATCGCCGTCGGAATTTTCAAGGATGCCGGTTTTAATCGCTTAGTTGAGGGTGGACAGCGGCGAATCCACATTACCGATGATCTCGACGACGTGGTCGACGAGGAGGAGGATGAATCTTGGAAGGAATGGGGCAAGAAAAAGACGTCCTCCAGCAATTTCGACTTGCCGGCCGCCGATTTGTCGAAGATGGAGATTTCGGAGATTCAGGCTGAGATGATCAAGCGGCGTTCAGGTCCGGCTATGGGATTTGTGAAGCTTCGGCTGGGCGTTCGCCGGACTGCGGACTTGGTGGCTGACATTGCTATCCAGTGGACGAAAGTTCTCAAAACTGGATCCGTTGAGGCACATTTTATGGCGGTCGACCTTAATACACTCATGTTCACGATGAGCAGAGGGCAAGACATAGATGAGTTGAAGGAGTATGTGTTGAGGCAGCCAGAGTCATACGAGATCAAAATTGGGGACCAAGTATTTCGAAGGCCTGGAGATCCTCCTCTGCAGGAAGTCATTGAGATGCTCCGGAAAGATAAGAACAAAGCTGAAGACACCAATCCTTCAGAAAATGTTGAGCCATTGCACCAGGAATTG

Coding sequence (CDS)

ATGAGAATTTGCTTCCCACGACGTTCTCCTCTCCTTCCCATCTTCTTTCTGATCGTAATCGCCGTCGGAATTTTCAAGGATGCCGGTTTTAATCGCTTAGTTGAGGGTGGACAGCGGCGAATCCACATTACCGATGATCTCGACGACGTGGTCGACGAGGAGGAGGATGAATCTTGGAAGGAATGGGGCAAGAAAAAGACGTCCTCCAGCAATTTCGACTTGCCGGCCGCCGATTTGTCGAAGATGGAGATTTCGGAGATTCAGGCTGAGATGATCAAGCGGCGTTCAGGTCCGGCTATGGGATTTGTGAAGCTTCGGCTGGGCGTTCGCCGGACTGCGGACTTGGTGGCTGACATTGCTATCCAGTGGACGAAAGTTCTCAAAACTGGATCCGTTGAGGCACATTTTATGGCGGTCGACCTTAATACACTCATGTTCACGATGAGCAGAGGGCAAGACATAGATGAGTTGAAGGAGTATGTGTTGAGGCAGCCAGAGTCATACGAGATCAAAATTGGGGACCAAGTATTTCGAAGGCCTGGAGATCCTCCTCTGCAGGAAGTCATTGAGATGCTCCGGAAAGATAAGAACAAAGCTGAAGACACCAATCCTTCAGAAAATGTTGAGCCATTGCACCAGGAATTG

Protein sequence

MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWKEWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIAIQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRPGDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL

Homology

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BLAST of MS005811 vs. NCBI nr
Match: XP_022147378.1 (uncharacterized protein LOC111016328 [Momordica charantia])

HSP 1 Score: 421.8 bits (1083), Expect = 3.6e-114
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVD+EEDESWK
Sbjct: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA
Sbjct: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP
Sbjct: 121 MQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL
Sbjct: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 215

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BLAST of MS005811 vs. NCBI nr
Match: XP_023540100.1 (uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.1 bits (884), Expect = 4.3e-91
Identity = 168/215 (78.14%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF   S LLP+FFLIV+  GIFKD GFNR  EGGQRRIHITDDLDDVVD+EEDESWK
Sbjct: 1   MRICF-SPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKK++SS+FDLP  DLSKME+ EIQAEM+KR+SGP MGFVKLRLGVRRT ++VA IA
Sbjct: 61  EWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWT++LKTGS+EA FMAVDL+TLMFT+ RGQD+DELKE+V   PESYEIKIG+Q FRRP
Sbjct: 121 MQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPP++EVIEML+KDKNKA+DTNPSE+ EPLHQEL
Sbjct: 181 GDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

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BLAST of MS005811 vs. NCBI nr
Match: XP_022942170.1 (uncharacterized protein LOC111447309 [Cucurbita moschata])

HSP 1 Score: 345.1 bits (884), Expect = 4.3e-91
Identity = 168/215 (78.14%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF   S LLP+FFLIV+  GIFKDAGFNR  EGGQRRIHITDDLDDVVD+EEDESWK
Sbjct: 1   MRICF-SPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKK++SS+FDLP  DLSKME+ EIQAEM+KR+SGP MGFVKLRLGVRRT ++V  IA
Sbjct: 61  EWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWT++LKTGS+EA FMAVDL+TLMFT+ RGQD+DELKE+V   PESYEIKIG+Q FRRP
Sbjct: 121 MQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPP++EVIEML+KDKNKA+DTNPSE+ EPLHQEL
Sbjct: 181 GDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

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BLAST of MS005811 vs. NCBI nr
Match: KAG6597131.1 (hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028598.1 hypothetical protein SDJN02_09779, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 167/215 (77.67%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF   S LLP+FFLIV+  GIFKD GFNR  EGGQRRIHITDDLDDVVD+EEDESWK
Sbjct: 1   MRICF-SPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKK++SS+FDLP  DLSKME+ EIQAEM+KR+SGP MGFVKLRLGVRRT ++V  IA
Sbjct: 61  EWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWT++LKTGS+EA FMAVDL+TLMFT+ RGQD+DELKE+V   PESYEIKIG+Q FRRP
Sbjct: 121 MQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPP++EVIEML+KDKNKA+DTNPSE+ EPLHQEL
Sbjct: 181 GDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of MS005811 vs. NCBI nr
Match: XP_022974607.1 (uncharacterized protein LOC111473291 [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 2.8e-90
Identity = 167/215 (77.67%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF   S LLP+FFLIV+  GIFKD GFNR  EGGQRRI ITDDLDDVVD+EEDESWK
Sbjct: 1   MRICF-SPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKK++SS+FDLP  DLSKME+ EIQAEM+KR+SGP MGFVKLRLGVRRT ++VA IA
Sbjct: 61  EWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWT++LKTGS+EA FMAVDL+TLMFT+ RGQD+DELKE+V   PESYEIKIG+Q FRRP
Sbjct: 121 MQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPP++EVIEML+KDKNKA+DTNPSE+ EPLHQEL
Sbjct: 181 GDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of MS005811 vs. ExPASy TrEMBL
Match: A0A6J1D159 (uncharacterized protein LOC111016328 OS=Momordica charantia OX=3673 GN=LOC111016328 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVD+EEDESWK
Sbjct: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA
Sbjct: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP
Sbjct: 121 MQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL
Sbjct: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 215

[Close]

BLAST of MS005811 vs. ExPASy TrEMBL
Match: A0A6J1FVR6 (uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC111447309 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.1e-91
Identity = 168/215 (78.14%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF   S LLP+FFLIV+  GIFKDAGFNR  EGGQRRIHITDDLDDVVD+EEDESWK
Sbjct: 1   MRICF-SPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKK++SS+FDLP  DLSKME+ EIQAEM+KR+SGP MGFVKLRLGVRRT ++V  IA
Sbjct: 61  EWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWT++LKTGS+EA FMAVDL+TLMFT+ RGQD+DELKE+V   PESYEIKIG+Q FRRP
Sbjct: 121 MQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPP++EVIEML+KDKNKA+DTNPSE+ EPLHQEL
Sbjct: 181 GDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of MS005811 vs. ExPASy TrEMBL
Match: A0A5A7TZI6 (Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004750 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 169/215 (78.60%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF R SP LP+F LIVIA GI KDAGFNR  +GGQRRIHITDDLDDVVD+EED+SWK
Sbjct: 1   MRICFSRSSP-LPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           +WGKKK+ SS+FD+P ADLSKM+  EIQAEM+KR SGP MGFVKLRLGVRRT D+VA+IA
Sbjct: 61  DWGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWTKVLKTGSV+A FMAVDLNTLMFTM RGQD++ELKE+VL Q ESYEIKIGD VFRRP
Sbjct: 121 MQWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPPL+EVI++L+KDKNKA+ T PSEN EPLH+EL
Sbjct: 181 GDPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]

BLAST of MS005811 vs. ExPASy TrEMBL
Match: A0A6J1IAQ9 (uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 167/215 (77.67%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF   S LLP+FFLIV+  GIFKD GFNR  EGGQRRI ITDDLDDVVD+EEDESWK
Sbjct: 1   MRICF-SPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDVVDDEEDESWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           EWGKKK++SS+FDLP  DLSKME+ EIQAEM+KR+SGP MGFVKLRLGVRRT ++VA IA
Sbjct: 61  EWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWT++LKTGS+EA FMAVDL+TLMFT+ RGQD+DELKE+V   PESYEIKIG+Q FRRP
Sbjct: 121 MQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPP++EVIEML+KDKNKA+DTNPSE+ EPLHQEL
Sbjct: 181 GDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of MS005811 vs. ExPASy TrEMBL
Match: A0A1S3AVD9 (uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 169/215 (78.60%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MRICFPRRSPLLPIFFLIVIAVGIFKDAGFNRLVEGGQRRIHITDDLDDVVDEEEDESWK 60
           MRICF R SP LP+F LIVIA GI KDAGFNR  +GGQRRIHITDDLDDVVD+EED+SWK
Sbjct: 1   MRICFSRSSP-LPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWK 60

Query: 61  EWGKKKTSSSNFDLPAADLSKMEISEIQAEMIKRRSGPAMGFVKLRLGVRRTADLVADIA 120
           +WGKKK+ SS+FD+P ADLSKM+  EIQAEM+KR SGP MGFVKLRLGVRRT D+VA+IA
Sbjct: 61  DWGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIA 120

Query: 121 IQWTKVLKTGSVEAHFMAVDLNTLMFTMSRGQDIDELKEYVLRQPESYEIKIGDQVFRRP 180
           +QWTKVLKTGSV+A FMAVDLNTLMFTM RGQD++ELKE+VL Q ESYEIKIGD VFRRP
Sbjct: 121 MQWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRP 180

Query: 181 GDPPLQEVIEMLRKDKNKAEDTNPSENVEPLHQEL 216
           GDPPL+EVI++L+KDKNKA+ T PSEN EPLH+EL
Sbjct: 181 GDPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]

BLAST of MS005811 vs. TAIR 10
Match: AT2G46000.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 99/180 (55.00%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 29  GFNRLVEGGQRRIHITDDLDDVVDEEEDESWKEWGKKKTSSSNFDLPAADLSKMEISEIQ 88
           GF R+ E  +RRI I+DDLDDV D EEDESWKEWGKK T +  FD P  D + M   +IQ
Sbjct: 24  GFVRIAEATKRRIEISDDLDDVEDNEEDESWKEWGKKAT-TPEFD-PPPDFTNMGFDQIQ 83

Query: 89  AEMIKRRSGPAMGFVKLRLGVRRTADLVADIAIQWTKVLKTGSVEAHFMAVDLNTLMFTM 148
            EM KR  G  +GFVKLRLGV RT D+V DIA++WTKVL+TG +   FMAVD +T+MF M
Sbjct: 84  EEMAKRTFGTVVGFVKLRLGVPRTKDVVIDIAMKWTKVLRTGGIGVRFMAVDRSTVMFNM 143

Query: 149 SRGQDIDELKEYVLRQPESYEIKIGDQVFRRPGDPPLQEVIEMLRKDKNK-AEDTNPSEN 208
             G+ + EL+E+VL Q E+YE+KIG Q FRRPGDPP ++V +  + ++ K  ED + ++N
Sbjct: 144 QNGKLVTELREFVLSQEEAYEVKIGKQEFRRPGDPPFEDVFDKFQAEQRKDHEDGDGNKN 201

The following BLAST results are available for this feature:

BLAST of MS005811 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147378.1	3.6e-114	99.07	uncharacterized protein LOC111016328 [Momordica charantia]	[more]
XP_023540100.1	4.3e-91	78.14	uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo]	[more]
XP_022942170.1	4.3e-91	78.14	uncharacterized protein LOC111447309 [Cucurbita moschata]	[more]
KAG6597131.1	1.2e-90	77.67	hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022974607.1	2.8e-90	77.67	uncharacterized protein LOC111473291 [Cucurbita maxima]	[more]

BLAST of MS005811 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS005811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D159	1.7e-114	99.07	uncharacterized protein LOC111016328 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1FVR6	2.1e-91	78.14	uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC1114473...	[more]
A0A5A7TZI6	1.3e-90	78.60	Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1IAQ9	1.3e-90	77.67	uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291...	[more]
A0A1S3AVD9	1.3e-90	78.60	uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=...	[more]

BLAST of MS005811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46000.1	1.3e-48	55.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019330	LRP chaperone MESD	PFAM	PF10185	Mesd	coord: 49..178 e-value: 1.6E-5 score: 24.9
None	No IPR available	GENE3D	3.30.70.260		coord: 85..179 e-value: 5.1E-13 score: 51.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..215
None	No IPR available	PANTHER	PTHR36357	OS03G0148300 PROTEIN	coord: 19..212
None	No IPR available	PANTHER	PTHR36357:SF1	OS03G0148300 PROTEIN	coord: 19..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005811.1	MS005811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding