MS005606 (gene) Bitter gourd (TR) v1

Overview
NameMS005606
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSignal recognition particle receptor subunit beta
Locationscaffold254: 234289 .. 235788 (-)
RNA-Seq ExpressionMS005606
SyntenyMS005606
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAACAGAACAGTGGAAGGTTCAGGCGGAACAAGTGAAGGTCCAGATGGAGCAATGGCTACAACTAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAGCTCTACGTCGGGGTTGGCGTGTTGCTATTAACTACACTACTTCTCTTATTGAGTGAGTCTCCTCTTTATCTGATCAGTTTTTTTTCGTTCTTCAGTCATGTAGTTGAATATCGCTTTCTGCAAGGTGAAACATTTTGAAATTTGAATTTGACTCTCCTCCTTCCTCGCCAGCTCGCTTGAACAAGCGCAGAAAATCGAATACCATTGTTCTTGGTGGGCTAAGTGGAAGTGGGAAAACTGTTCTCTTCTATCAAGTAAGCATCTGCATTGCTGGTTTCTTCCCTTTTTTATACGACTGCTGGATAAAACACTTGAACCTGGTATTTTAGTTTTTCTAGAATTTGATAACTGAATTGGTTGGCCTAAGATATTTGATATATTTGTATTACTGCTGTGATTTATGATGTTTTTATGCCTTTGCAGCTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGGCACGTTTGTGCTTCATTCTGAAATATCAAAGGTAGCTCATGTTTTCTAGTACTGCTGCTCAGGAAGTGAGAATGCTCCTTTCTCTGATCCATTACGGCTTTAGAAATCAGTACTATACTAAGAATGCTGTGCGGTTTTCGTTTCCAACATTCTCAACTTTTTTCTTTCATTATTTGATCAAAGATTCAAACTTAAACTAACAGGTATTTTATTTCGTCGTTTTCTTGGTAGATGGACAAACTGAAGCCTGTTCATCTTGTGGATGTCCCTGGCCATTCTCGCCTTCGAGCCAAACTAGACGAGTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTCTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTAATTGATTAATCACCCCATCTTTATGTTTATATCTGATGCAATTCATGTTCAAGTACACAAACAGAAGTGCAGAAATAAACGTCTCGTGTCGTTAGTTTAATTTACTTAAATTTCTACTGAAGGTACCTCTATGATATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCTTGATACTATGCAATAAAACAGACAAGGTTACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAGAAGGAAATGTATGGCTTCTTTCTTTAGTATTTGGTATTTGGTGTCATTATCTGCCATACATTGTTATTTCGACCTTACGTTTTCTATTATTGTGCAGTGACAAGCTACGAGTGTCGAGAAGCGCAATTTCGGCAGCTGATATTGCAAATGACTTCACACTAGGGGTACCTGGTAAAGCATTTTCGTTCTCGCAGTGCCATAACAAAGTTGCAGTTGGTGAAGCCTCTGGATTGATGGGTCAAGTAACCGAGGTGGAGCAATTTATAAGGGAAAATGTGAAGCCG

mRNA sequence

ATGGAAGGAACAGAACAGTGGAAGGTTCAGGCGGAACAAGTGAAGGTCCAGATGGAGCAATGGCTACAACTAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAGCTCTACGTCGGGGTTGGCGTGTTGCTATTAACTACACTACTTCTCTTATTGACTCGCTTGAACAAGCGCAGAAAATCGAATACCATTGTTCTTGGTGGGCTAAGTGGAAGTGGGAAAACTGTTCTCTTCTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGGCACGTTTGTGCTTCATTCTGAAATATCAAAGATGGACAAACTGAAGCCTGTTCATCTTGTGGATGTCCCTGGCCATTCTCGCCTTCGAGCCAAACTAGACGAGTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTCTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGATATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCTTGATACTATGCAATAAAACAGACAAGGTTACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAGAAGGAAATTGACAAGCTACGAGTGTCGAGAAGCGCAATTTCGGCAGCTGATATTGCAAATGACTTCACACTAGGGGTACCTGGTAAAGCATTTTCGTTCTCGCAGTGCCATAACAAAGTTGCAGTTGGTGAAGCCTCTGGATTGATGGGTCAAGTAACCGAGGTGGAGCAATTTATAAGGGAAAATGTGAAGCCG

Coding sequence (CDS)

ATGGAAGGAACAGAACAGTGGAAGGTTCAGGCGGAACAAGTGAAGGTCCAGATGGAGCAATGGCTACAACTAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAGCTCTACGTCGGGGTTGGCGTGTTGCTATTAACTACACTACTTCTCTTATTGACTCGCTTGAACAAGCGCAGAAAATCGAATACCATTGTTCTTGGTGGGCTAAGTGGAAGTGGGAAAACTGTTCTCTTCTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGGCACGTTTGTGCTTCATTCTGAAATATCAAAGATGGACAAACTGAAGCCTGTTCATCTTGTGGATGTCCCTGGCCATTCTCGCCTTCGAGCCAAACTAGACGAGTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTCTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGATATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCTTGATACTATGCAATAAAACAGACAAGGTTACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAGAAGGAAATTGACAAGCTACGAGTGTCGAGAAGCGCAATTTCGGCAGCTGATATTGCAAATGACTTCACACTAGGGGTACCTGGTAAAGCATTTTCGTTCTCGCAGTGCCATAACAAAGTTGCAGTTGGTGAAGCCTCTGGATTGATGGGTCAAGTAACCGAGGTGGAGCAATTTATAAGGGAAAATGTGAAGCCG

Protein sequence

MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
Homology
BLAST of MS005606 vs. NCBI nr
Match: XP_022147102.1 (signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147104.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147105.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147106.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147107.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia])

HSP 1 Score: 511.1 bits (1315), Expect = 5.6e-141
Identity = 264/266 (99.25%), Postives = 264/266 (99.25%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK DKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVKP 267
           VAVGEASGLMGQVTEVEQFIRENVKP
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVKP 266

BLAST of MS005606 vs. NCBI nr
Match: XP_022147108.1 (signal recognition particle receptor subunit beta-like isoform X2 [Momordica charantia])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 264/266 (99.25%), Postives = 264/266 (99.25%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK DKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK-DKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVKP 267
           VAVGEASGLMGQVTEVEQFIRENVKP
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVKP 265

BLAST of MS005606 vs. NCBI nr
Match: XP_022151281.1 (signal recognition particle receptor subunit beta-like [Momordica charantia])

HSP 1 Score: 487.3 bits (1253), Expect = 8.6e-134
Identity = 251/266 (94.36%), Postives = 255/266 (95.86%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKV  EQ+KVQMEQWLQ GLE VHQIPPIQLYVGVGVLLLTTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVHVEQLKVQMEQWLQQGLELVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVL GLSGSGKTV+FYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK +KLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVIFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKNKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQ EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQXEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVKP 267
           V V EASGL G+VTEVEQFIRENVKP
Sbjct: 241 VTVAEASGLTGEVTEVEQFIRENVKP 266

BLAST of MS005606 vs. NCBI nr
Match: XP_004135257.1 (signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 hypothetical protein Csa_007800 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 3.3e-133
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLL TRL KRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+K DKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLG+PGKAFSF+QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

BLAST of MS005606 vs. NCBI nr
Match: XP_008446189.1 (PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo] >ADN33824.1 signal recognition particle receptor subunit beta [Cucumis melo subsp. melo])

HSP 1 Score: 481.9 bits (1239), Expect = 3.6e-132
Identity = 245/265 (92.45%), Postives = 256/265 (96.60%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+K DKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADI+NDFTLG+PGKAFSF+QC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

BLAST of MS005606 vs. ExPASy Swiss-Prot
Match: Q54XX1 (Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX=44689 GN=srprb PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.6e-24
Identity = 68/206 (33.01%), Postives = 109/206 (52.91%), Query Frame = 0

Query: 58  KRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPV 117
           K ++   I + GLS +GKT L   L +      T TS+  N G ++  ++       K +
Sbjct: 81  KVKRGVNIAILGLSNAGKTALLLNLTNVDKKISTHTSITTNNGVYITENK-------KKL 140

Query: 118 HLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIP 177
            ++DVPG+ + +A L + L  +A +++V+D   F+ N    ++YLYDILTN SV +KKIP
Sbjct: 141 PIIDVPGNGKAKASLPKILSNSACIIYVIDGTTFIDNSTQEAQYLYDILTNESVYQKKIP 200

Query: 178 VLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSA----ISAADIANDFTLGVPGKAFS 237
           VL+  NK D  +    E +   +E+E+D LR +R A    +   +   D  LG+ G  F 
Sbjct: 201 VLVFNNKMDLDSTIDTEQVKNILERELDDLRRTRGATPIVLGQEEDKKDIYLGIEGTPFQ 260

Query: 238 FSQCHNKV--AVGEASGLMGQVTEVE 258
           F    N V  + G AS   G++ E++
Sbjct: 261 FDHLPNDVQFSNGSASPSNGELKEID 279

BLAST of MS005606 vs. ExPASy Swiss-Prot
Match: Q4FZX7 (Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 GN=Srprb PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.6e-21
Identity = 78/229 (34.06%), Postives = 121/229 (52.84%), Query Frame = 0

Query: 29  VHQIPPIQLYVGVGVL-LLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSS 88
           + Q  P  L V V VL +L TL+      +++     ++  GL  SGKT+LF +L  G  
Sbjct: 28  LQQRDPTLLSVAVAVLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTLLFVRLLTG-Q 87

Query: 89  HQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAK-LDEFLPQAAGVVFVV 148
           ++ T TS+  +   + +++     ++   + L+D+PGH  LR + LD F   A  VVFVV
Sbjct: 88  YRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRLQFLDRFKSSARAVVFVV 147

Query: 149 DALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDK 208
           D+  F    +  +E+LY +L ++  +K     L+ CNK D   A + + I +Q+EKE++ 
Sbjct: 148 DSATFQREVKDVAEFLYQVLIDSMALKNTPAFLVACNKQDIAMAKSAKLIQQQLEKELNT 207

Query: 209 LRVSRSAI-SAADIAN--DFTLGVPGKAFSFSQCHNKVAVGEASGLMGQ 253
           LRV+RSA  S  D ++     LG  GK F FSQ   KV   E S   G+
Sbjct: 208 LRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGR 250

BLAST of MS005606 vs. ExPASy Swiss-Prot
Match: P47758 (Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.0e-21
Identity = 78/229 (34.06%), Postives = 122/229 (53.28%), Query Frame = 0

Query: 29  VHQIPPIQLYVGVGVL-LLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSS 88
           + Q  P  L V V +L +L TL+      +++     ++  GL  SGKT+LF +L  G  
Sbjct: 28  LQQRDPTLLSVAVALLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTLLFVRLLTG-Q 87

Query: 89  HQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAK-LDEFLPQAAGVVFVV 148
           ++ T TS+  +   + +++     ++   + L+D+PGH  LR + LD F   A  VVFVV
Sbjct: 88  YRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVV 147

Query: 149 DALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDK 208
           D+  F    +  +E+LY +L ++  +K    +LI CNK D   A + + I +Q+EKE++ 
Sbjct: 148 DSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQQLEKELNT 207

Query: 209 LRVSRSAI-SAADIAN--DFTLGVPGKAFSFSQCHNKVAVGEASGLMGQ 253
           LRV+RSA  S  D ++     LG  GK F FSQ   KV   E S   G+
Sbjct: 208 LRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGR 250

BLAST of MS005606 vs. ExPASy Swiss-Prot
Match: Q9Y5M8 (Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRPRB PE=1 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-20
Identity = 79/229 (34.50%), Postives = 121/229 (52.84%), Query Frame = 0

Query: 29  VHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKS-NTIVLGGLSGSGKTVLFYQLRDGSS 88
           + Q  P  L V V VL +   L+    +  RR S   ++L GL  SGKT+LF +L  G  
Sbjct: 30  LQQTDPTLLSVVVAVLAVLLTLVFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTG-L 89

Query: 89  HQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAK-LDEFLPQAAGVVFVV 148
           ++ T TS+  +   + +++     ++   + L+D+PGH  LR + L+ F   A  +VFVV
Sbjct: 90  YRDTQTSITDSCAVYRVNN-----NRGNSLTLIDLPGHESLRLQFLERFKSSARAIVFVV 149

Query: 149 DALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDK 208
           D+  F    +  +E+LY +L ++  +K     LI CNK D   A + + I +Q+EKE++ 
Sbjct: 150 DSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKLIQQQLEKELNT 209

Query: 209 LRVSRSAI-SAADIAN--DFTLGVPGKAFSFSQCHNKVAVGEASGLMGQ 253
           LRV+RSA  S  D ++     LG  GK F FSQ   KV   E S   G+
Sbjct: 210 LRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGR 252

BLAST of MS005606 vs. ExPASy Swiss-Prot
Match: P36057 (Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SRP102 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.4e-09
Identity = 51/159 (32.08%), Postives = 76/159 (47.80%), Query Frame = 0

Query: 54  TRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDK 113
           T + ++    +I++ G   SGKT L   L    S + TV S EP        S ++    
Sbjct: 30  TGIKQKSYQPSIIIAGPQNSGKTSLL-TLLTTDSVRPTVVSQEPLSAADYDGSGVT---- 89

Query: 114 LKPVHLVDVPGHSRLRAKLDEFLPQAA----GVVFVVDALDFLPNCRAASEYLYDILT-N 173
                LVD PGH +LR KL ++L   A    G++F+VD+          +E+L DIL+  
Sbjct: 90  -----LVDFPGHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSIT 149

Query: 174 ASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKL 208
            S  +  I +LI CNK++  TA     I   +E EI K+
Sbjct: 150 ESSCENGIDILIACNKSELFTARPPSKIKDALESEIQKV 178

BLAST of MS005606 vs. ExPASy TrEMBL
Match: A0A6J1D1F7 (Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673 GN=LOC111016123 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.7e-141
Identity = 264/266 (99.25%), Postives = 264/266 (99.25%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK DKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVKP 267
           VAVGEASGLMGQVTEVEQFIRENVKP
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVKP 266

BLAST of MS005606 vs. ExPASy TrEMBL
Match: A0A6J1D0D7 (Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673 GN=LOC111016123 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 5.1e-140
Identity = 264/266 (99.25%), Postives = 264/266 (99.25%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK DKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK-DKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVKP 267
           VAVGEASGLMGQVTEVEQFIRENVKP
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVKP 265

BLAST of MS005606 vs. ExPASy TrEMBL
Match: A0A6J1DE59 (Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673 GN=LOC111019241 PE=3 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134
Identity = 251/266 (94.36%), Postives = 255/266 (95.86%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKV  EQ+KVQMEQWLQ GLE VHQIPPIQLYVGVGVLLLTTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVHVEQLKVQMEQWLQQGLELVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVL GLSGSGKTV+FYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK +KLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVIFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKNKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQ EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQXEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVKP 267
           V V EASGL G+VTEVEQFIRENVKP
Sbjct: 241 VTVAEASGLTGEVTEVEQFIRENVKP 266

BLAST of MS005606 vs. ExPASy TrEMBL
Match: A0A0A0KSA6 (Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=Csa_5G600910 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLL TRL KRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+K DKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLG+PGKAFSF+QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

BLAST of MS005606 vs. ExPASy TrEMBL
Match: E5GBI2 (Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.8e-132
Identity = 245/265 (92.45%), Postives = 256/265 (96.60%), Query Frame = 0

Query: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRR 60
           MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLLLTRL KRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLV 120
           KSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+K DKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADI+NDFTLG+PGKAFSF+QC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVGEASGLMGQVTEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

BLAST of MS005606 vs. TAIR 10
Match: AT5G05670.2 (signal recognition particle binding )

HSP 1 Score: 379.0 bits (972), Expect = 3.1e-105
Identity = 187/256 (73.05%), Postives = 220/256 (85.94%), Query Frame = 0

Query: 12  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLT-RLNKRRKSNTIVLGGL 71
           E +K+  EQW   G+E++ +IPP QLY  +GVLL TT+LL L+ RL +R KSNT++L GL
Sbjct: 5   EDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSGL 64

Query: 72  SGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRA 131
           +GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE +K  K+KPVHLVDVPGHSRLR 
Sbjct: 65  TGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLRP 124

Query: 132 KLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTA 191
           KL+EFLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+TA
Sbjct: 125 KLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLTA 184

Query: 192 HTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLM 251
           HTKEFI +QMEKEI+KLR SRSA+S ADIANDFT+G+ G+ FSF+ C NKV V EASGL 
Sbjct: 185 HTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGLT 244

Query: 252 GQVTEVEQFIRENVKP 267
           G+  ++E FIRE +KP
Sbjct: 245 GETIQIEDFIREYIKP 260

BLAST of MS005606 vs. TAIR 10
Match: AT5G05670.1 (signal recognition particle binding )

HSP 1 Score: 379.0 bits (972), Expect = 3.1e-105
Identity = 187/256 (73.05%), Postives = 220/256 (85.94%), Query Frame = 0

Query: 12  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLT-RLNKRRKSNTIVLGGL 71
           E +K+  EQW   G+E++ +IPP QLY  +GVLL TT+LL L+ RL +R KSNT++L GL
Sbjct: 5   EDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSGL 64

Query: 72  SGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRA 131
           +GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE +K  K+KPVHLVDVPGHSRLR 
Sbjct: 65  TGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLRP 124

Query: 132 KLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTA 191
           KL+EFLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+TA
Sbjct: 125 KLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLTA 184

Query: 192 HTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLM 251
           HTKEFI +QMEKEI+KLR SRSA+S ADIANDFT+G+ G+ FSF+ C NKV V EASGL 
Sbjct: 185 HTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGLT 244

Query: 252 GQVTEVEQFIRENVKP 267
           G+  ++E FIRE +KP
Sbjct: 245 GETIQIEDFIREYIKP 260

BLAST of MS005606 vs. TAIR 10
Match: AT2G18770.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-104
Identity = 191/256 (74.61%), Postives = 219/256 (85.55%), Query Frame = 0

Query: 12  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLS 71
           E +K+  EQW + GLEFV +IPP QLY  +GVLLL T+ LL  RL +R KSNT++L GLS
Sbjct: 5   EDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGLS 64

Query: 72  GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE-ISKMDKLKPVHLVDVPGHSRLRA 131
           GSGKTVLFYQLRDGSSHQG VTSMEPNEGTFVLH+E  +K  K+KPVHL+DVPGHSRL +
Sbjct: 65  GSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLIS 124

Query: 132 KLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTA 191
           KL+E+LP+AA VVFVVDAL+FLPN RAASEYLYDILTNASV+K K PVL+ CNKTDKVTA
Sbjct: 125 KLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVTA 184

Query: 192 HTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLM 251
           HTKEFI +QMEKEIDKLRVSRSAIS ADIANDFTLG+ G+ FSFS CHNKV V EASGL 
Sbjct: 185 HTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGLT 244

Query: 252 GQVTEVEQFIRENVKP 267
           G+  +V++FIRE+VKP
Sbjct: 245 GETDQVQEFIREHVKP 260

BLAST of MS005606 vs. TAIR 10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 41/133 (30.83%), Postives = 63/133 (47.37%), Query Frame = 0

Query: 69  GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDK-LKPVHLVDVPGHSR 128
           GL  +GKT L   +  G    G    M P  G       + K+ K    + L D+ G  R
Sbjct: 26  GLQNAGKTSLVNVVATG----GYSEDMIPTVG-----FNMRKVTKGSVTIKLWDLGGQPR 85

Query: 129 LRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDK 188
            R+  + +    + +V+VVDA D   N   +   L+D+L+  S+    IP+L+L NK DK
Sbjct: 86  FRSMWERYCRSVSAIVYVVDAAD-PDNLSVSKSELHDLLSKTSL--NGIPLLVLGNKIDK 145

Query: 189 VTAHTKEFINRQM 201
             A +KE +  +M
Sbjct: 146 PGALSKEALTDEM 146

BLAST of MS005606 vs. TAIR 10
Match: AT3G49870.1 (ADP-ribosylation factor-like A1C )

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-05
Identity = 41/133 (30.83%), Postives = 63/133 (47.37%), Query Frame = 0

Query: 69  GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLK-PVHLVDVPGHSR 128
           GL  +GKT L   +  G    G    M P  G       + K+ K    + L D+ G  R
Sbjct: 26  GLQNAGKTSLVNVVATG----GYSEDMIPTVG-----FNMRKVTKGNVTIKLWDLGGQPR 85

Query: 129 LRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDK 188
            R+  + +    + +V+VVDA D   N   +   L+D+L+  S+    IP+L+L NK DK
Sbjct: 86  FRSMWERYCRAVSAIVYVVDAAD-PDNLSVSKSELHDLLSKTSL--NGIPLLVLGNKIDK 145

Query: 189 VTAHTKEFINRQM 201
             A +KE +  +M
Sbjct: 146 PGALSKEALTDEM 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022147102.15.6e-14199.25signal recognition particle receptor subunit beta-like isoform X1 [Momordica cha... [more]
XP_022147108.11.1e-13999.25signal recognition particle receptor subunit beta-like isoform X2 [Momordica cha... [more]
XP_022151281.18.6e-13494.36signal recognition particle receptor subunit beta-like [Momordica charantia][more]
XP_004135257.13.3e-13393.21signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 ... [more]
XP_008446189.13.6e-13292.45PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo]... [more]
Match NameE-valueIdentityDescription
Q54XX12.6e-2433.01Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX... [more]
Q4FZX74.6e-2134.06Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 ... [more]
P477586.0e-2134.06Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Sr... [more]
Q9Y5M81.7e-2034.50Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRP... [more]
P360572.4e-0932.08Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (s... [more]
Match NameE-valueIdentityDescription
A0A6J1D1F72.7e-14199.25Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673... [more]
A0A6J1D0D75.1e-14099.25Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673... [more]
A0A6J1DE594.2e-13494.36Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673... [more]
A0A0A0KSA61.6e-13393.21Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=... [more]
E5GBI21.8e-13292.45Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX... [more]
Match NameE-valueIdentityDescription
AT5G05670.23.1e-10573.05signal recognition particle binding [more]
AT5G05670.13.1e-10573.05signal recognition particle binding [more]
AT2G18770.11.2e-10474.61P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT5G67560.12.8e-0530.83ADP-ribosylation factor-like A1D [more]
AT3G49870.13.6e-0530.83ADP-ribosylation factor-like A1C [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 56..264
e-value: 2.2E-60
score: 205.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 60..207
IPR019009Signal recognition particle receptor, beta subunitPFAMPF09439SRPRBcoord: 61..241
e-value: 3.3E-36
score: 124.4
IPR019009Signal recognition particle receptor, beta subunitPANTHERPTHR11485:SF50P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEINcoord: 7..266
IPR019009Signal recognition particle receptor, beta subunitCDDcd04105SR_betacoord: 63..262
e-value: 7.28097E-68
score: 207.174
NoneNo IPR availablePANTHERPTHR11485TRANSFERRINcoord: 7..266
NoneNo IPR availablePROSITEPS51417ARFcoord: 55..260
score: 9.485613

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS005606.1MS005606.1mRNA