MS005305 (gene) Bitter gourd (TR) v1

Overview


Name	MS005305
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PITH domain-containing protein
Location	scaffold83: 757030 .. 759957 (-)
RNA-Seq Expression	MS005305
Synteny	MS005305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAGAGATTCTCATACTGTGCTTCACTTATATAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACTCTCTTACTAATGCTCTTAATCAGGTGCTGTTTGTCATTTTTTACTAGAGCTGTTTGTCAGTTACAATTACTCATTATAGTTCTTGAATTTCCTTACATGGTTGAATAGTTCATTTCTCGATTCAATGAAGTTGAAGATGATGGTGAGCTAGATTTACGTTCTTTCAAGATATTAATTTACGTCTCTCTCTGTCTCTCTAATTGCAAGTCTTTTGATTTTAATATCTTTGTAAGAAACTTTATGTGGGAAGGTGTGGAGGAGGGAGGGGGTTGAATCTTCTAAGATGGGAAGTTGTGACCAAGGGGGTCAGCGAGGTTGGGATAGGTATGGGGGAAGTTGGCGAATAGGAATTTAGTTCTCTTGGCAAGTGGTTGTGGCGCTTTTCCTTAGAGTCTAAATATTCAGTCTAATTCTTTATGGCATATGATTATTGTGAGTAAGTATGGCTGTCACTCTCTGCACTGGTGGATCAAATCTCTGGTCTCTAAAGTAAAGACTAAAGGCACATTCAAAGTCCTGGTAGAGTCATTTGCTATTGTATACTGTGCATTATCAACTAGATTAAATTTGTTTATGGAAAAAATTTCCTTTTGAACGTCTCCTCACCTTTATAATGTTTTCCTTTGAAAAGAGACGTTGGTCAATTCATTGTTAGTTCAAAACGTCGAACTTCTTACCTTCCCTCTTGATTTTTAATTTCATTTTAAAAGACATCTTTCTGATAACGTGTCGCAAGATTAATCTAATATTATTATTGTTTTCGTTGTTTTTTTTTTTGTGTATATTACAAGGTGTTCGTTTTTATTCAAATGTTACTGATTTGCACAGTTGGGTTCTTGAGCCATCTGTCATCTTTTGTTGTTTTACCCCCTCCCTATTTCACCATGATTTTGAAGAGATTAATCACACACCGTGAACTTTGTCTAAAGATCTTCAGCTACGGTTCTGGGCTCTCAGTGGTGTGTGTTGTGTAAGAACGCAATTAAAGATGAAGATCATTTGCTATGGAGATGTCACCTTTTCCGTGAAACTAGAATTGATTTTTGGACACATTTGGAGTCAGTTTGACTACTCCTAGATGTTGTATGGGATATGGTGGAGAAGGTGCTTGTCAATCCCCATTTTTCATAATTAGGGTCTGGTTTTTTGGCAAACAGTTTTCTTTACTATTTTGTTGAATTTATGGCAGGAGAGAAATAAGAATTTTAAGGGTATAAATAAGTCTTGGGAAGAGGTTTGGACTGTGGAACATTTTGATATCTCTCTTTTTTCAGTGTTTTCATCTAAAGTGTTTTGTAATTATCCTTTAATTTTTATTCTTAACTATTATAGCAACCTCTTGTTCTGTTTTTAGATTGCTGATTTGTTTGGATCTTCTTTTTAGGCCACTCGTTTCGTACATTCGCTCATCTTAATAAAAGTTGATTTATTATTATTTTTTAAAAAATTTATGAGAAAATAGGCATCTCTTTTCCCATTAATTTTTTCCCAATATCTGTGAGAAATTATTATACCCAGGGCTTGAAGCAAATTTTTTTCTTAAATTAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCCGATGAGCAACTTCTGATATACATACCATTTAACCAAGTCATTAAATTGCATTCCGTGGTCATTAAAGGACCTGAAGAGGAAGGTTAGTACTCTATTACAATTGATTGTCATGTATAATTATGGTTCATCTAATCTGTTGTCATCAAAATTTTTCATAACATGTCTTACATATCCAATATGGCCACTGAGGTATGGTAATTCCATTTTTAACTTTTATTATTTGATTATTGTTATTCCGGGTTATCCACTCCCTAGTCCCTCCAGAGCTCCAGTCTTGTTCTCTTGCCCCACTGCTACCTTTTGGCATGGTGAGGGAGTAATGGACTATGGAGAGAGAGAATTTCTGTGTGTTAGGGAGAAAGACAACCTTGAGTTTGGTGTGTTTTCTTGGCTTTCTACCAGAAACTTTTGTAGTGAACCCTTTTCTTAATCTCAGCCAATTTAGAAGTTCTTTTAGTAATTCTTGGCTGTAGGAGGACATCTAATCCTAATCCTCCCTTCTCTTTTGTTGCTCCCGTATCTATATATACTTCTTCCATACAACAAAATATATTGTAATATCTCTTATTAAATGAAAAAGTATTGCAATGGAATCCTGCAAACACTTTATCAGGAAAGCACATACATATTGTCTTTCATCACTCTTTTATTCTGCTTAACTGACAAATCGCAGGACTCTAACATTATGGTTGTTCTCCAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGGTAAACTAAATTGTGTGCTTGAATTGATATTTACTGCAAGTGTTTCGACATATTATCAATTGATTATTTTCTGTTTCATGAATGCTGCAGCAACGTCAATGACTTCCCTCCCAGTGACACAATTGTGTTTTCACCAGATAATCTTACGGTAAATTTTCCCATGCCTGTACCATATCTCATCACAAAAATGAAATTTGTTTTAGGGGAGACCACTATACTTTATAATGGAACTGGAGCATTATTGTTTTATCTTTATTCTCTGTAGGGAAAGCCAGAAGTTGTAAAGTACGTTAAATTTCAAAATGTCCGTAGGTAAATCACATCTATAGTCTATGTTGATTGTCTTCTTTTAGATCTTATGTTGAAAGTATCAGCTGATTGTTCTGAATAATTTGTATGTTTGTCAGCTTGACAATTTTTATAGAGGATAACCAATCTGGGGCTGACACTACGAAAGTTCAAAAGATTGCCCTGTATGGAACAACG

mRNA sequence

ATCAGAGATTCTCATACTGTGCTTCACTTATATAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACTCTCTTACTAATGCTCTTAATCAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCCGATGAGCAACTTCTGATATACATACCATTTAACCAAGTCATTAAATTGCATTCCGTGGTCATTAAAGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTTCCCTCCCAGTGACACAATTGTGTTTTCACCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTTAAATTTCAAAATGTCCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGGGCTGACACTACGAAAGTTCAAAAGATTGCCCTGTATGGAACAACG

Coding sequence (CDS)

ATCAGAGATTCTCATACTGTGCTTCACTTATATAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACTCTCTTACTAATGCTCTTAATCAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCCGATGAGCAACTTCTGATATACATACCATTTAACCAAGTCATTAAATTGCATTCCGTGGTCATTAAAGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTTCCCTCCCAGTGACACAATTGTGTTTTCACCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTTAAATTTCAAAATGTCCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGGGCTGACACTACGAAAGTTCAAAAGATTGCCCTGTATGGAACAACG

Protein sequence

IRDSHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

Homology

[Close]

BLAST of MS005305 vs. NCBI nr
Match: XP_022142973.1 (PITH domain-containing protein At3g04780 [Momordica charantia])

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79
Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 6   TVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIP 65
           T +H  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIP
Sbjct: 15  TAIH-RNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIP 74

Query: 66  FNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVV 125
           FNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVV
Sbjct: 75  FNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVV 134

Query: 126 KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
Sbjct: 135 KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 169

[Close]

BLAST of MS005305 vs. NCBI nr
Match: XP_038891254.1 (PITH domain-containing protein At3g04780 [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 5.9e-77
Identity = 144/150 (96.00%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 12  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIK 71
           NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIK
Sbjct: 12  NQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIK 71

Query: 72  LHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVVKYVKFQ 131
           LHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPEVVKYVKFQ
Sbjct: 72  LHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQ 131

Query: 132 NVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           NVRSLTIFIEDNQSGADTTK+QKIALYGTT
Sbjct: 132 NVRSLTIFIEDNQSGADTTKIQKIALYGTT 161

[Close]

BLAST of MS005305 vs. NCBI nr
Match: XP_022946891.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946893.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022999328.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_022999329.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_023521729.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023521946.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545536.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545537.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545538.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >KAG6599300.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030300.1 PITH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.7 bits (761), Expect = 5.9e-77
Identity = 147/158 (93.04%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 4   SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIY 63
           S T +H  NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIY
Sbjct: 5   SATAIH-RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIY 64

Query: 64  IPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPE 123
           IPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPE
Sbjct: 65  IPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPE 124

Query: 124 VVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           VVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTT
Sbjct: 125 VVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTT 161

[Close]

BLAST of MS005305 vs. NCBI nr
Match: XP_008455826.1 (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1 PITH domain-containing protein [Cucumis melo var. makuwa] >TYK18409.1 PITH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76
Identity = 142/150 (94.67%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 12  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIK 71
           NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+K
Sbjct: 12  NQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVK 71

Query: 72  LHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVVKYVKFQ 131
           LHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPEVVKYVKFQ
Sbjct: 72  LHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQ 131

Query: 132 NVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           NVRSLTIFIEDNQSG DTTK+QKIALYGTT
Sbjct: 132 NVRSLTIFIEDNQSGTDTTKIQKIALYGTT 161

[Close]

BLAST of MS005305 vs. NCBI nr
Match: XP_022937687.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023537940.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.4 bits (755), Expect = 2.9e-76
Identity = 144/158 (91.14%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 4   SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIY 63
           S T +H  NQVDLSDFINWSG+ECLNQNFSH+ TNAL+QTCRDNDSLLLESDADEQ+L+Y
Sbjct: 5   SATAIH-RNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMY 64

Query: 64  IPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPE 123
           IPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPE
Sbjct: 65  IPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPE 124

Query: 124 VVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           VVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
Sbjct: 125 VVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 161

[Close]

BLAST of MS005305 vs. ExPASy Swiss-Prot
Match: Q9SQZ9 (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 5.2e-60
Identity = 115/149 (77.18%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 13  QVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKL 72
           QVDL DFI+WSGVECLNQ+ SHSL NAL Q  R+++ L LESDADEQLLIYIPFNQVIKL
Sbjct: 13  QVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQLLIYIPFNQVIKL 72

Query: 73  HSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVVKYVKFQN 132
           HS  IKGPEEEGP+TVK FSNKE+M F NVNDFPPSDT   + +NL GKP V+KYVKFQN
Sbjct: 73  HSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQN 132

Query: 133 VRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           VRSLTIFIE NQSG++ TKVQKIALYG+T
Sbjct: 133 VRSLTIFIEANQSGSEVTKVQKIALYGST 161

[Close]

BLAST of MS005305 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 108.2 bits (269), Expect = 8.6e-23
Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 14  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLH 73
           +DL  FIN +G ECLN++  H   N     C   D+  LESD DEQLLI + FNQ +KL+
Sbjct: 124 MDLMPFINKAGCECLNESDEHGFDN-----CLRKDTTFLESDCDEQLLITVAFNQPVKLY 183

Query: 74  SVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTIVFSPDNLTGKPEV-VKYVKF 133
           S+  +GP+  +GP+ VK+F N   +M F       P+  +  + D++     V ++YVKF
Sbjct: 184 SMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKF 243

Query: 134 QNVRSLTIFIEDNQSGADTTKVQKIALYGT 161
           QNV S+TIF++ NQ   +TT++      GT
Sbjct: 244 QNVNSVTIFVQSNQGEEETTRISYFTFIGT 268

[Close]

BLAST of MS005305 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 106.3 bits (264), Expect = 3.3e-22
Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 0


Query: 14  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLH 73
           +DL  FIN +G ECLN++  H   N     C   D   LESD DEQLLI + FNQ +KL+
Sbjct: 124 MDLMPFINKAGCECLNESDEHGFDN-----CLRKDMSFLESDCDEQLLITVAFNQPVKLY 183

Query: 74  SVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTIVFSPDNLTGKPEV-VKYVKF 133
           S+  +GP+  +GP+ VK+F N   +M F       P+  +  + D++     V ++YVKF
Sbjct: 184 SMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKF 243

Query: 134 QNVRSLTIFIEDNQSGADTTKVQKIALYGT 161
           QNV S+T+F++ NQ   +TT++      GT
Sbjct: 244 QNVNSVTLFVQSNQGEEETTRISYFTFIGT 268

[Close]

BLAST of MS005305 vs. ExPASy Swiss-Prot
Match: Q920J4 (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 105.9 bits (263), Expect = 4.3e-22
Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 0


Query: 14  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLH 73
           +DL  FIN +G ECLN++  H   N     C   D   LESD DEQLLI + FNQ +KL+
Sbjct: 124 MDLMPFINKAGCECLNESDEHGFDN-----CLRKDLSFLESDCDEQLLITVAFNQPVKLY 183

Query: 74  SVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTIVFSPDNLTGKPEV-VKYVKF 133
           S+  +GP+  +GP+ VK+F N   +M F       P+  +  + D++     V ++YVKF
Sbjct: 184 SMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKF 243

Query: 134 QNVRSLTIFIEDNQSGADTTKVQKIALYGT 161
           QNV S+T+F++ NQ   +TT++      GT
Sbjct: 244 QNVNSVTLFVQSNQGEEETTRISYFTFIGT 268

[Close]

BLAST of MS005305 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.3e-22
Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 25  VECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVI---KGPE 84
           +ECLNQ   H L +A N     N S  LESD DEQL+IYIPF +V+K+HS+ I   KG  
Sbjct: 138 LECLNQQDDHDLKSAFN----SNPSSFLESDVDEQLMIYIPFLEVVKVHSIAITPVKGET 197

Query: 85  EEGPRTVKLFSNK-ENMGFGNVNDFPPS---DTIVFSPDNLTGKPEVV--KYVKFQNVRS 144
              P+T+KL+ N+  N+ F +   F P+   + IV+  D+   +P ++  ++VKFQ V S
Sbjct: 198 SSAPKTIKLYINQPNNLSFEDAESFTPTQVIEDIVYEQDD---QPTIIPLRFVKFQRVNS 257

Query: 145 LTIFIEDNQSGADTTKVQKIALYG 160
           L IFI  N    +TTK+ ++ L+G
Sbjct: 258 LVIFIYSNVGEEETTKISRLELFG 274

[Close]

BLAST of MS005305 vs. ExPASy TrEMBL
Match: A0A6J1CPL1 (PITH domain-containing protein At3g04780 OS=Momordica charantia OX=3673 GN=LOC111012971 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.0e-79
Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 6   TVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIP 65
           T +H  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIP
Sbjct: 15  TAIH-RNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIP 74

Query: 66  FNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVV 125
           FNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVV
Sbjct: 75  FNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVV 134

Query: 126 KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
Sbjct: 135 KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 169

[Close]

BLAST of MS005305 vs. ExPASy TrEMBL
Match: A0A6J1KJE4 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111493734 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77
Identity = 147/158 (93.04%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 4   SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIY 63
           S T +H  NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIY
Sbjct: 5   SATAIH-RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIY 64

Query: 64  IPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPE 123
           IPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPE
Sbjct: 65  IPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPE 124

Query: 124 VVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           VVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTT
Sbjct: 125 VVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTT 161

[Close]

BLAST of MS005305 vs. ExPASy TrEMBL
Match: A0A6J1G4V6 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111450832 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77
Identity = 147/158 (93.04%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 4   SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIY 63
           S T +H  NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIY
Sbjct: 5   SATAIH-RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIY 64

Query: 64  IPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPE 123
           IPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPE
Sbjct: 65  IPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPE 124

Query: 124 VVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           VVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTT
Sbjct: 125 VVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTT 161

[Close]

BLAST of MS005305 vs. ExPASy TrEMBL
Match: A0A5D3D4D2 (PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001340 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 142/150 (94.67%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 12  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIK 71
           NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+K
Sbjct: 12  NQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVK 71

Query: 72  LHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVVKYVKFQ 131
           LHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPEVVKYVKFQ
Sbjct: 72  LHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQ 131

Query: 132 NVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           NVRSLTIFIEDNQSG DTTK+QKIALYGTT
Sbjct: 132 NVRSLTIFIEDNQSGTDTTKIQKIALYGTT 161

[Close]

BLAST of MS005305 vs. ExPASy TrEMBL
Match: A0A1S3C1X8 (PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 142/150 (94.67%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 12  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIK 71
           NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+K
Sbjct: 12  NQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVK 71

Query: 72  LHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVVKYVKFQ 131
           LHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTIV SPDNLTGKPEVVKYVKFQ
Sbjct: 72  LHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQ 131

Query: 132 NVRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           NVRSLTIFIEDNQSG DTTK+QKIALYGTT
Sbjct: 132 NVRSLTIFIEDNQSGTDTTKIQKIALYGTT 161

[Close]

BLAST of MS005305 vs. TAIR 10
Match: AT3G04780.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 231.9 bits (590), Expect = 3.7e-61
Identity = 115/149 (77.18%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 13  QVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKL 72
           QVDL DFI+WSGVECLNQ+ SHSL NAL Q  R+++ L LESDADEQLLIYIPFNQVIKL
Sbjct: 13  QVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQLLIYIPFNQVIKL 72

Query: 73  HSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEVVKYVKFQN 132
           HS  IKGPEEEGP+TVK FSNKE+M F NVNDFPPSDT   + +NL GKP V+KYVKFQN
Sbjct: 73  HSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQN 132

Query: 133 VRSLTIFIEDNQSGADTTKVQKIALYGTT 162
           VRSLTIFIE NQSG++ TKVQKIALYG+T
Sbjct: 133 VRSLTIFIEANQSGSEVTKVQKIALYGST 161

[Close]

BLAST of MS005305 vs. TAIR 10
Match: AT2G25950.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 44/155 (28.39%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 10  LYNQVDLSDFINWSGVECLNQNFS---HSLTNALNQTCRDNDSLLLESDADEQLLIYIPF 69
           LY  +DLS       V  LN++ S    S+  A  Q    +   L  ++ D +LL+++PF
Sbjct: 20  LYKHIDLSK------VSALNESVSGSAKSVFKAWEQRLHSSGEHLESNEGDPELLVFVPF 79

Query: 70  NQVIKLHSV-VIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIVFSPDNLTGKPEV- 129
              +K+ S+ ++ GPE   P  +++F N+E + F +            + +NL G  E  
Sbjct: 80  TSDVKIKSISIVGGPEGTSPSKLRVFINREGIDFSDAESMQAVQEWELA-ENLQGVLEYQ 139

Query: 130 VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYG 160
            +Y KFQ+V ++T+   ++  G DTT+++ I   G
Sbjct: 140 TRYSKFQSVGNITLHFPES-FGGDTTQIRYIGFKG 166

The following BLAST results are available for this feature:

BLAST of MS005305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142973.1	2.2e-79	97.44	PITH domain-containing protein At3g04780 [Momordica charantia]	[more]
XP_038891254.1	5.9e-77	96.00	PITH domain-containing protein At3g04780 [Benincasa hispida]	[more]
XP_022946891.1	5.9e-77	93.04	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892...	[more]
XP_008455826.1	2.2e-76	94.67	PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1...	[more]
XP_022937687.1	2.9e-76	91.14	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129...	[more]

BLAST of MS005305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQZ9	5.2e-60	77.18	PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g...	[more]
O43396	8.6e-23	40.00	Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3	[more]
Q8CDN6	3.3e-22	39.33	Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3	[more]
Q920J4	4.3e-22	39.33	Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3	[more]
Q9USR1	7.3e-22	41.67	Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]

BLAST of MS005305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPL1	1.0e-79	97.44	PITH domain-containing protein At3g04780 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1KJE4	2.8e-77	93.04	PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G4V6	2.8e-77	93.04	PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3D4D2	1.1e-76	94.67	PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C1X8	1.1e-76	94.67	PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923...	[more]

BLAST of MS005305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04780.1	3.7e-61	77.18	Protein of unknown function (DUF1000)	[more]
AT2G25950.1	1.0e-10	28.39	Protein of unknown function (DUF1000)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010400	PITH domain	PFAM	PF06201	PITH	coord: 16..160 e-value: 1.5E-38 score: 132.3
IPR010400	PITH domain	PROSITE	PS51532	PITH	coord: 5..161 score: 49.667351
IPR037047	PITH domain superfamily	GENE3D	2.60.120.470	PITH domain	coord: 7..161 e-value: 3.7E-52 score: 178.2
IPR045099	PITH domain-containing protein 1-like	PANTHER	PTHR12175	AD039 HT014 THIOREDOXIN FAMILY TRP26	coord: 12..161
None	No IPR available	PANTHER	PTHR12175:SF5	THIOREDOXIN LIKE 1	coord: 12..161
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 9..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005305.1	MS005305.1	mRNA