MS005277 (gene) Bitter gourd (TR) v1

Overview
NameMS005277
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionflowering locus K homology domain
Locationscaffold83: 538740 .. 543326 (-)
RNA-Seq ExpressionMS005277
SyntenyMS005277
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGACGTGGATCAGAACTACACGCATGTTGAAGATAATCAAGTAGATGAAAATACACAAATATATGAGAATGCTCAGGGACAGGATAATACACTGGAACAGGATAATGCTCAGGAGCCAGAGCCCTTGCACGAACTTGAGAACGAACATGTACAAGAAACCTTAGAGCCTGAGCAAAAGCAGGTGCATAATGAGGATTCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCGGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCACAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTCGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCTGGAACAGCTGAAAGAGCTGTAAGTATTCCCCCTTTTTGATGATAACTTTTCTATTATAATTTAGCTAGTGTTTTTGGTGTAAATTATTTGATGATATAATATCAAATTAATGCGATCTATCCAGTTTTTAATTTATCTCTTAATGAATATTGATGCTTCAGTAAGAATTATTGTTTTGGGTTTTCTTAATTTTCATATTATAAATATGTATGGCACCTTGATTCAAGTTAGGCAAATATTGGGCATTGCATGGTATGATTAGCCCAATCTGCTCGAGTATTAGCTTCTTTTAATCAATTGTTTAATCTCTATTTATACTCTTGGTTTGTCATATTCAAGCATGTGACGTCAGTCATATGGCCGTTTAATGATGTAGACACGATTCTTAAGATCCCTGGGAAAATTTCAGACTAAAGAGTTAATAAGATATTATCATTTGTTAATTTGATTAGAACTTATAATAAAAGCCATTAAATCGCTGTTTAAAAAATATAGAAGTCGGATAATGTTCTAAAATTCTTCTGAGTGATGTAACAAGCATTTGAATATATTAAACCACTGGGCACTCTTAAAATGGATCTGCCAACACTTGTGGGGAAGATTGAGCTCCATCTTTCAAAGATATGTGCTTATACACCCCGACAATGGGTGTTAAATATGGTTCTCTTTCAGCTTTATAACTGGCAAAGGAAATCTCCAAAAACTAAGATTGACCCTTTAAACATGTAAAAACCACATTATAAAACAAAAAGGAATGTAAGACTAATCCAGGTTATCCCAGAATATGGATACAGTTGCCTTGATTCTAGTAACAAAAAATGAATCTGTGCAGGTTGTGTGCAAATTTTAAGGCAACGACTCAATCTTCAATAGGATCCCATATTTGAAGAACCAAATATCCAGATGCGGGGATCAGCATTCAACATTACAAAGTTCTGAAAAGTTGATCTGAATAACACGTAGGCATCTGGAACTTTTGTACCATGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGATTGATGTCCAGATTTCCAACGGGATAATGAATATAAATAATAGAGAAAACATAATGATAAATGTAAAGAGTTAAAAATTTTTAGTAATTTTTAAGATGTTTTGACATGGTTAAAGATATGATTAAAATGAAAATTGAGAGGAACTAAAACTGACAAATTAATCACCAATATCAAATAGAAGTGTTGTATTTTTGCTTATGCTTCTATGGTATCTTCTCCAATAATTCAGTTCATGATCCAACAACGTATAAAATAATAGTGTGGAAACCTAAACTCATGAATTTAAATGAAGAAAACAACTACATTATCTAATTTCTTGAAACATAGAAAGCTGATAAATAACCTCCATGTTCAAAATTGGCTCACAAATTTCAACATGTGCTGCACCCTTTTGATCTATTATGGAAAAGAAACCCTTATAGATATTTGCAGCCTCCAAGTTGTGTCTTGCATGATCTATTATTGGAAGAAGAATCATCCGCTGTTTCCGCCCTTGCCTCTTTTGATATATAGTTTGAAAGAGAATGTTTTTGAATTGTTTGGTCTACCTTATAATTTTGGCAACTTTATTATTCTAATTTCAAGGTGCTCAAAATTCAACGAAGAGGTTAAGCAAGTTGGATGGGTAAGGGTTGGAAATCTTGTAGGAGATCTGAATGGAAACTGATAGAATAGTTTTTGAAGGCTGATGTGGTATATGTAGTGTACATTCTATTTTGTGGCTTTTTTACGATCTTTGCAGATATATTTAATTTGTCATTGTTGACTATGCATATTGAAGGGGACTCTCTCTGTGTATTTTGCATTTAATACATCTGGAAGTTTGTGTTTTAATAAACTGATATGATACTGTTCATATCTTTTATAAGAGGTGTATTTAATAGTAACTCGTATCAGTAGGAGCTTGGGATTATGATCTGCTTGTCCTTGGTTTTTTCCAATAGATGTTATAATTTAATTGTCTTTTCATTCGTTGGCGTTTCACGCGTTTTCCCTATCTGTGGAGCTCACGAGCTGGGTCTAAAATTTGACGAAGTATTTTGTGCTTTGTATTTGTTATATGGGCGATTCTGTCTATTTAGGAAGGAGAATTTCAAATTCTAGTCTTCATCCCCATTTGATTTTATTTTTTCCTTCTGGTAGTTAATGAATTTCTGATGAGAATTTGTATTTCTTACAAGATAGTATTATTCATTTAATAGGTAATGGTGTCTGCAAAGGAGGAACCTGATTCTACTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAGCATGGGAGGTAAAGTCTCAACGAGACTGCTAGTGGCAGCTTCGCAAGCAGGAAGTTTAATTGGGAAGCAGGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGTTCAGGTGGGCTTTTAGATGCGATTTGATTATCTTCTTTAATGGTCGTATATTTGTCAGGGAAAACATATGTTCTTGTTTTCTATTTACTCGTTTTTAAATTGATAATTATCTATCCATCTTGGTTTTCATCTTTCTAATGAATCCTACCCTTGTCATTCGGGAATTGGAGTACTGCAGAGGATTTACCTGTTTTTGCTCTCCAAGATGATAGAGTTGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCGCATCTTAGAAAGTTCCTGGTCGACCGTAGTATTATCCCAGTCTTTGAAATGAATGTGAGTATAATTTCCCTATGAGTTGTCAGCCAATTCCATTTGAAGAATGAATAGTCTTAAATTTTCCTTTTCTCTCTTCCTCCCAACCCAAATGCCAAAAAACCAGATGCAGATGTCAAATCCACAGATGGATCACATGCCGCCACCACACCAATCTTGGGGCCCGCCTCAGGGAATGCCACCAAATGCTGGGGGTGGTCCCGGCTTTGGACCGAATCCTCAATACATGCCACCTCCTCGTCAGTTTGACAACTATTACCCACCTGCTGATATGCCATCAGTTATGGATAAGCAACCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTACATGCATCATCGAATGCACAGGCAGCGCCTTCAATTGTCACACAGGTTAGTTAATGCCTTTTTTTGCATTCATGTGTTATATCACAGAAAAGAATTTGATCTCTTATATATGATGTGGCTTTGTGAACCCGGTAGTTTATCAAAAGTAACTCTGATGGAGCATCCTTGAGAGACCTGCTTACTTTTTCCTTCTAAAACTGGTAATTTTTTAAGATGTGCATATTGGTTTTTGTTGTACTTGCAGACAACTCAACAAATGCAGATTCCATTGTCTTTTGCTGACGCTGTTATTGGAACTGCTGGTGCTAGTATCAGCTACATTCGGCGTGCTAGTGGGGCCACTGTTACCATCCAAGAAACGAGGGGGGTCCCAGGGGAAATGACAGTTGAAATGAGTGGAACTGCGTCTCAAGTCCAAGCAGCCCAACAGCTTATACAGGCAATTATTCTTTATGACTCTTTCTGATTTTGCATCTTCTTCAGTCCGAAGACTTCAGATATGATGTCAACTTTCAGTAATAGTTTTTTTTAGTTAAAATATTTTCTTTCTGGAAGAAGCCCGGCTGGGAAGGGTTTGATGGATTCGTAGTGGTGTCATAGTTCTGGTGGCTCAACTTCGAAAATAACATAGTGAAGATTGTTTTTTCTATGTGGATATCAATCCATTTGGTTGATCTAGTCGAAATAACTTCTCATTGAGTTATTGGTGGGAAAAAGGTCGTCTTTTGTTTTTTCTGGTTCCCCACCTGGAGTTTAATTCTCCGTGAATAAAAGTTGGGGCAGTGCTAACTGTTGACATCGTATAAACATCAATACTAACTTGTGGAGGTGGAATTGCTGCTTTTCGGGGCGATCTATGGTCTTTTAATAATCCGTATTTGATTGTGTTGCAGAATTTCATGGCCGGTGCTGGAGCCCCAGCCCAGGCTCAAGCTGGGGCGACGACAGACCAAGGCTACAACTCTTATGCTGCTGCTCATGGTTCAGTCTATGCATCTCCCCCTGCAAACCCGGCTGCTCATGCTGGTCATGCTGGAGGCTATGGCTCTGTCTACGGTACAAATTATGGGTAC

mRNA sequence

ATGGCTGACGTGGATCAGAACTACACGCATGTTGAAGATAATCAAGTAGATGAAAATACACAAATATATGAGAATGCTCAGGGACAGGATAATACACTGGAACAGGATAATGCTCAGGAGCCAGAGCCCTTGCACGAACTTGAGAACGAACATGTACAAGAAACCTTAGAGCCTGAGCAAAAGCAGGTGCATAATGAGGATTCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCGGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCACAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTCGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCTGGAACAGCTGAAAGAGCTGTAATGGTGTCTGCAAAGGAGGAACCTGATTCTACTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAGCATGGGAGGTAAAGTCTCAACGAGACTGCTAGTGGCAGCTTCGCAAGCAGGAAGTTTAATTGGGAAGCAGGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGTTCAGAGGATTTACCTGTTTTTGCTCTCCAAGATGATAGAGTTGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCGCATCTTAGAAAGTTCCTGGTCGACCGTAGTATTATCCCAGTCTTTGAAATGAATATGCAGATGTCAAATCCACAGATGGATCACATGCCGCCACCACACCAATCTTGGGGCCCGCCTCAGGGAATGCCACCAAATGCTGGGGGTGGTCCCGGCTTTGGACCGAATCCTCAATACATGCCACCTCCTCGTCAGTTTGACAACTATTACCCACCTGCTGATATGCCATCAGTTATGGATAAGCAACCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTACATGCATCATCGAATGCACAGGCAGCGCCTTCAATTGTCACACAGACAACTCAACAAATGCAGATTCCATTGTCTTTTGCTGACGCTGTTATTGGAACTGCTGGTGCTAGTATCAGCTACATTCGGCGTGCTAGTGGGGCCACTGTTACCATCCAAGAAACGAGGGGGGTCCCAGGGGAAATGACAGTTGAAATGAGTGGAACTGCGTCTCAAAATTTCATGGCCGGTGCTGGAGCCCCAGCCCAGGCTCAAGCTGGGGCGACGACAGACCAAGGCTACAACTCTTATGCTGCTGCTCATGGTTCAGTCTATGCATCTCCCCCTGCAAACCCGGCTGCTCATGCTGGTCATGCTGGAGGCTATGGCTCTGTCTACGGTACAAATTATGGGTAC

Coding sequence (CDS)

ATGGCTGACGTGGATCAGAACTACACGCATGTTGAAGATAATCAAGTAGATGAAAATACACAAATATATGAGAATGCTCAGGGACAGGATAATACACTGGAACAGGATAATGCTCAGGAGCCAGAGCCCTTGCACGAACTTGAGAACGAACATGTACAAGAAACCTTAGAGCCTGAGCAAAAGCAGGTGCATAATGAGGATTCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCGGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCACAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTCGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCTGGAACAGCTGAAAGAGCTGTAATGGTGTCTGCAAAGGAGGAACCTGATTCTACTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAGCATGGGAGGTAAAGTCTCAACGAGACTGCTAGTGGCAGCTTCGCAAGCAGGAAGTTTAATTGGGAAGCAGGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGTTCAGAGGATTTACCTGTTTTTGCTCTCCAAGATGATAGAGTTGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCGCATCTTAGAAAGTTCCTGGTCGACCGTAGTATTATCCCAGTCTTTGAAATGAATATGCAGATGTCAAATCCACAGATGGATCACATGCCGCCACCACACCAATCTTGGGGCCCGCCTCAGGGAATGCCACCAAATGCTGGGGGTGGTCCCGGCTTTGGACCGAATCCTCAATACATGCCACCTCCTCGTCAGTTTGACAACTATTACCCACCTGCTGATATGCCATCAGTTATGGATAAGCAACCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTACATGCATCATCGAATGCACAGGCAGCGCCTTCAATTGTCACACAGACAACTCAACAAATGCAGATTCCATTGTCTTTTGCTGACGCTGTTATTGGAACTGCTGGTGCTAGTATCAGCTACATTCGGCGTGCTAGTGGGGCCACTGTTACCATCCAAGAAACGAGGGGGGTCCCAGGGGAAATGACAGTTGAAATGAGTGGAACTGCGTCTCAAAATTTCATGGCCGGTGCTGGAGCCCCAGCCCAGGCTCAAGCTGGGGCGACGACAGACCAAGGCTACAACTCTTATGCTGCTGCTCATGGTTCAGTCTATGCATCTCCCCCTGCAAACCCGGCTGCTCATGCTGGTCATGCTGGAGGCTATGGCTCTGTCTACGGTACAAATTATGGGTAC

Protein sequence

MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNYGY
Homology
BLAST of MS005277 vs. NCBI nr
Match: XP_022143057.1 (flowering locus K homology domain [Momordica charantia] >XP_022143058.1 flowering locus K homology domain [Momordica charantia])

HSP 1 Score: 911.4 bits (2354), Expect = 3.3e-261
Identity = 473/482 (98.13%), Postives = 473/482 (98.13%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ 60
           MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ
Sbjct: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ 60

Query: 61  KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120
           KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL
Sbjct: 61  KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120

Query: 121 DGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLL 180
           DGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLL
Sbjct: 121 DGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLL 180

Query: 181 VAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAV 240
           VAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAV
Sbjct: 181 VAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAV 240

Query: 241 ELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPN 300
           ELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPN
Sbjct: 241 ELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPN 300

Query: 301 PQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQ 360
           PQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQ
Sbjct: 301 PQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQ 360

Query: 361 QMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-------- 420
           QMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS        
Sbjct: 361 QMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQL 420

Query: 421 -QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNY 474
            QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNY
Sbjct: 421 IQNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNY 480

BLAST of MS005277 vs. NCBI nr
Match: XP_023538035.1 (flowering locus K homology domain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 821.6 bits (2121), Expect = 3.4e-234
Identity = 432/488 (88.52%), Postives = 449/488 (92.01%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVD------ENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQE 60
           MADV+Q+YTHV+DN+VD      EN Q+YENAQ QDNTLEQ++ +EPE LH LENEHV E
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQLYENAQVQDNTLEQESTEEPENLHGLENEHVPE 60

Query: 61  TLEPEQKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE E K+VHNED+LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGK 180
           ARIKILDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA+AP+MGGK
Sbjct: 121 ARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGK 180

Query: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240
           VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA
Sbjct: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240

Query: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGG 300
           GVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM+HMPPPHQSWGPPQGMPPNAGGG
Sbjct: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGG 300

Query: 301 PGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSI 360
           PGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPMGVH  +NAQ+ PSI
Sbjct: 301 PGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSI 360

Query: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-- 420
           VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS  
Sbjct: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 420

Query: 421 -------QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGS 474
                  QNFMAGAGAPAQ QAG + DQGYNSY AAHGSVYASPPA   AHA HAGGYGS
Sbjct: 421 QAAQQLIQNFMAGAGAPAQTQAGGSADQGYNSY-AAHGSVYASPPAANPAHASHAGGYGS 480

BLAST of MS005277 vs. NCBI nr
Match: KAG6586320.1 (Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 818.1 bits (2112), Expect = 3.8e-233
Identity = 431/488 (88.32%), Postives = 447/488 (91.60%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVD------ENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQE 60
           MADV+Q+YTHV+DN+VD      EN QIYENAQ QDNTLEQ++ +EPE LH LENEH  E
Sbjct: 57  MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHGPE 116

Query: 61  TLEPEQKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE E K+VHNED+LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 117 TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 176

Query: 121 ARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGK 180
           ARIKILDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA+AP+MGGK
Sbjct: 177 ARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGK 236

Query: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240
           VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA
Sbjct: 237 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 296

Query: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGG 300
           GVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM+HMPPPHQSWGPPQGMPPNAGGG
Sbjct: 297 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGG 356

Query: 301 PGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSI 360
           PGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPMGVH  +NAQ+ PSI
Sbjct: 357 PGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSI 416

Query: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-- 420
           VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS  
Sbjct: 417 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 476

Query: 421 -------QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGS 474
                  QNFMAGAGAPAQ QAG + DQGYNSY  AHGSVYASPPA   AHA HAGGYGS
Sbjct: 477 QAAQQLIQNFMAGAGAPAQTQAGGSADQGYNSY-TAHGSVYASPPAANPAHASHAGGYGS 536

BLAST of MS005277 vs. NCBI nr
Match: XP_022937898.1 (flowering locus K homology domain-like [Cucurbita moschata])

HSP 1 Score: 817.0 bits (2109), Expect = 8.4e-233
Identity = 431/488 (88.32%), Postives = 448/488 (91.80%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVD------ENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQE 60
           MADV+Q+YTHV+DN+VD      EN QIYENAQ QDNTLEQ++ +EPE LH LENE+  E
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGPE 60

Query: 61  TLEPEQKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE E K+VHNED+LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGK 180
           ARIKILDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA+AP+MGGK
Sbjct: 121 ARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGK 180

Query: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240
           VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA
Sbjct: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240

Query: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGG 300
           GVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM+HMPPPHQSWGPPQGMPPNAGGG
Sbjct: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGG 300

Query: 301 PGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSI 360
           PGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPMGVH  +NAQ+ PSI
Sbjct: 301 PGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSI 360

Query: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-- 420
           VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS  
Sbjct: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 420

Query: 421 -------QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGS 474
                  QNFMAGAGAPAQ QAG + DQGYNSY AAHGSVYASPPA   AHA HAGGYGS
Sbjct: 421 QAAQQLIQNFMAGAGAPAQTQAGGSADQGYNSY-AAHGSVYASPPAANPAHASHAGGYGS 480

BLAST of MS005277 vs. NCBI nr
Match: XP_022965693.1 (flowering locus K homology domain-like [Cucurbita maxima])

HSP 1 Score: 816.2 bits (2107), Expect = 1.4e-232
Identity = 430/488 (88.11%), Postives = 446/488 (91.39%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVD------ENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQE 60
           MADV+Q+YTHV+DN+VD      EN QIYENAQ QDNTLEQ++ +EPE LH LENEHV E
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPE 60

Query: 61  TLEPEQKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE E K+VHNED+LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGK 180
           ARIKILDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA+AP+MGGK
Sbjct: 121 ARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGK 180

Query: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240
           VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA
Sbjct: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240

Query: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGG 300
           GVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM+HMPPPHQSWGPPQGMPPNAGGG
Sbjct: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGG 300

Query: 301 PGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSI 360
           PGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPMGVH  +NAQ+ PSI
Sbjct: 301 PGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSI 360

Query: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-- 420
           VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS  
Sbjct: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 420

Query: 421 -------QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGS 474
                  QNFMAGAGAPAQAQAG + DQGYNSY    GSVYASPPA    HA HAGGYGS
Sbjct: 421 QAAQQLIQNFMAGAGAPAQAQAGGSADQGYNSY--TQGSVYASPPAANPGHASHAGGYGS 480

BLAST of MS005277 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 7.1e-150
Identity = 316/495 (63.84%), Postives = 356/495 (71.92%), Query Frame = 0

Query: 5   DQNYTHVEDNQVDE---NTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPE-- 64
           DQ    V+D+  D+     Q  E  Q QD   +Q   Q    + +   + VQ+ +E E  
Sbjct: 95  DQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEG 154

Query: 65  --------QKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVE 124
                   QK    ED+     EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVE
Sbjct: 155 IPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVE 214

Query: 125 ETRARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSM 184
           ETRARIKILDGPPGT ERAVMVS KEEP+S+ PP++DGLLRVH RIVDGL+G+ + AP  
Sbjct: 215 ETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPP- 274

Query: 185 GGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLG 244
             KVSTRLLV ASQAGSLIGKQGGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G
Sbjct: 275 PSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 334

Query: 245 DPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNA 304
           +P  VH+A+ELIASHLRKFLVDRSIIP FE  MQ    QMDHMPPPHQSWGPPQG  P+ 
Sbjct: 335 EPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSV 394

Query: 305 GGGPGFGPN-PQYMPPPRQFDNYYPPADM-PSVMDKQPHHGISAYGREAPMGVHASSNAQ 364
           GGG G+G N P YM PP + D+YYPP +M    M+KQPH GISAYGRE PM VH SS   
Sbjct: 395 GGG-GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS--- 454

Query: 365 AAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 424
           A P +  Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+SG
Sbjct: 455 APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSG 514

Query: 425 TAS---------QNFM--AGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAG 474
           T S         QNFM  AGA APAQ Q  A   QGYN Y A HGSVYA+ P NP     
Sbjct: 515 TGSQVQTAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPY-ATHGSVYAAAPTNP----- 574

BLAST of MS005277 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.9e-60
Identity = 172/441 (39.00%), Postives = 247/441 (56.01%), Query Frame = 0

Query: 11  VEDN---QVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQKQVHNED 70
           VE+N    + EN  +          L++++   PE L++ ++    ET  P+       D
Sbjct: 8   VENNGSINLPENENLIPAGFSAAALLDENSGAFPE-LNQPDSLAAAETTFPD-----TND 67

Query: 71  SLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTA 130
           S     E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T 
Sbjct: 68  S----AEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTP 127

Query: 131 ERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKV--STRLLVAASQ 190
           +R V++S KEEP++   PA+D +LRV +R V GL  ++       G V  S RLLVA++Q
Sbjct: 128 DRIVLISGKEEPEAYMSPAMDAVLRVFRR-VSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 187

Query: 191 AGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIAS 250
           A +LIGKQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  
Sbjct: 188 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVG 247

Query: 251 HLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMP 310
           HLR+FLVD +++P+FE        Q     P  +S      +  N    P F    +  P
Sbjct: 248 HLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREP 307

Query: 311 PPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGV-HASSNAQAAPSIVTQTTQQMQI 370
              + D+       PS        G+S Y ++  +   H+   A+ + + VTQ +Q MQI
Sbjct: 308 LFLERDSRVDSRVQPS--------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQI 367

Query: 371 PLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---------QNF 430
           P S+A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT S         Q F
Sbjct: 368 PFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEF 427

Query: 431 MAGAGAPAQAQAG-ATTDQGY 436
           +     P     G A  D GY
Sbjct: 428 IINHKEPVSVSGGYARIDSGY 427

BLAST of MS005277 vs. ExPASy Swiss-Prot
Match: Q5E9A3 (Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 100/356 (28.09%), Postives = 155/356 (43.54%), Query Frame = 0

Query: 87  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSTFPPA 146
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER +          T    
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTGP 76

Query: 147 VDGLLRVHKRIVDGLEGD------NAHAPSMGGKVSTRLLVAASQAGSLIGKQGGTVKSI 206
            + + +    I+D LE D      N+ A S    V+ RL+V A+Q GSLIGK G  +K I
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASR-PPVTLRLVVPATQCGSLIGKGGCKIKEI 136

Query: 207 QEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVF 266
           +E +   V+V G     +     +R + + G P  V + V+ I   + + L         
Sbjct: 137 RESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETL--------- 196

Query: 267 EMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMP--------PPR---- 326
                  +PQ   M  P+Q    P   P    GG     +    P        PP     
Sbjct: 197 -----SQSPQGRVMTIPYQPM--PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYS 256

Query: 327 -QFDNYYPPADMPSV--MDKQPHHGISAYGREAPMGVHASS----NAQAAPSIVTQTTQQ 386
            Q  +   P D+  +  + +Q  H    +G     G+ +SS       A+    TQTT +
Sbjct: 257 IQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHE 316

Query: 387 MQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 418
           + IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

BLAST of MS005277 vs. ExPASy Swiss-Prot
Match: Q15365 (Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 100/356 (28.09%), Postives = 155/356 (43.54%), Query Frame = 0

Query: 87  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSTFPPA 146
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER +          T    
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTGP 76

Query: 147 VDGLLRVHKRIVDGLEGD------NAHAPSMGGKVSTRLLVAASQAGSLIGKQGGTVKSI 206
            + + +    I+D LE D      N+ A S    V+ RL+V A+Q GSLIGK G  +K I
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASR-PPVTLRLVVPATQCGSLIGKGGCKIKEI 136

Query: 207 QEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVF 266
           +E +   V+V G     +     +R + + G P  V + V+ I   + + L         
Sbjct: 137 RESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETL--------- 196

Query: 267 EMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMP--------PPR---- 326
                  +PQ   M  P+Q    P   P    GG     +    P        PP     
Sbjct: 197 -----SQSPQGRVMTIPYQPM--PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYS 256

Query: 327 -QFDNYYPPADMPSV--MDKQPHHGISAYGREAPMGVHASS----NAQAAPSIVTQTTQQ 386
            Q  +   P D+  +  + +Q  H    +G     G+ +SS       A+    TQTT +
Sbjct: 257 IQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHE 316

Query: 387 MQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 418
           + IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

BLAST of MS005277 vs. ExPASy Swiss-Prot
Match: P60335 (Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 100/356 (28.09%), Postives = 155/356 (43.54%), Query Frame = 0

Query: 87  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSTFPPA 146
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER +          T    
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTGP 76

Query: 147 VDGLLRVHKRIVDGLEGD------NAHAPSMGGKVSTRLLVAASQAGSLIGKQGGTVKSI 206
            + + +    I+D LE D      N+ A S    V+ RL+V A+Q GSLIGK G  +K I
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASR-PPVTLRLVVPATQCGSLIGKGGCKIKEI 136

Query: 207 QEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVF 266
           +E +   V+V G     +     +R + + G P  V + V+ I   + + L         
Sbjct: 137 RESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETL--------- 196

Query: 267 EMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMP--------PPR---- 326
                  +PQ   M  P+Q    P   P    GG     +    P        PP     
Sbjct: 197 -----SQSPQGRVMTIPYQPM--PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYS 256

Query: 327 -QFDNYYPPADMPSV--MDKQPHHGISAYGREAPMGVHASS----NAQAAPSIVTQTTQQ 386
            Q  +   P D+  +  + +Q  H    +G     G+ +SS       A+    TQTT +
Sbjct: 257 IQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHE 316

Query: 387 MQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 418
           + IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

BLAST of MS005277 vs. ExPASy TrEMBL
Match: A0A6J1CPP3 (flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036 PE=4 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.6e-261
Identity = 473/482 (98.13%), Postives = 473/482 (98.13%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ 60
           MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ
Sbjct: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ 60

Query: 61  KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120
           KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL
Sbjct: 61  KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120

Query: 121 DGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLL 180
           DGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLL
Sbjct: 121 DGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLL 180

Query: 181 VAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAV 240
           VAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAV
Sbjct: 181 VAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAV 240

Query: 241 ELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPN 300
           ELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPN
Sbjct: 241 ELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPN 300

Query: 301 PQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQ 360
           PQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQ
Sbjct: 301 PQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQ 360

Query: 361 QMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-------- 420
           QMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS        
Sbjct: 361 QMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQL 420

Query: 421 -QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNY 474
            QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNY
Sbjct: 421 IQNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNY 480

BLAST of MS005277 vs. ExPASy TrEMBL
Match: A0A6J1FHB5 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111444152 PE=4 SV=1)

HSP 1 Score: 817.0 bits (2109), Expect = 4.1e-233
Identity = 431/488 (88.32%), Postives = 448/488 (91.80%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVD------ENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQE 60
           MADV+Q+YTHV+DN+VD      EN QIYENAQ QDNTLEQ++ +EPE LH LENE+  E
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGPE 60

Query: 61  TLEPEQKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE E K+VHNED+LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGK 180
           ARIKILDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA+AP+MGGK
Sbjct: 121 ARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGK 180

Query: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240
           VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA
Sbjct: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240

Query: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGG 300
           GVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM+HMPPPHQSWGPPQGMPPNAGGG
Sbjct: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGG 300

Query: 301 PGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSI 360
           PGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPMGVH  +NAQ+ PSI
Sbjct: 301 PGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSI 360

Query: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-- 420
           VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS  
Sbjct: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 420

Query: 421 -------QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGS 474
                  QNFMAGAGAPAQ QAG + DQGYNSY AAHGSVYASPPA   AHA HAGGYGS
Sbjct: 421 QAAQQLIQNFMAGAGAPAQTQAGGSADQGYNSY-AAHGSVYASPPAANPAHASHAGGYGS 480

BLAST of MS005277 vs. ExPASy TrEMBL
Match: A0A6J1HPQ7 (flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC111465516 PE=4 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 7.0e-233
Identity = 430/488 (88.11%), Postives = 446/488 (91.39%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVD------ENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQE 60
           MADV+Q+YTHV+DN+VD      EN QIYENAQ QDNTLEQ++ +EPE LH LENEHV E
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPE 60

Query: 61  TLEPEQKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE E K+VHNED+LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGK 180
           ARIKILDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA+AP+MGGK
Sbjct: 121 ARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGK 180

Query: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240
           VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA
Sbjct: 181 VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPA 240

Query: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGG 300
           GVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM+HMPPPHQSWGPPQGMPPNAGGG
Sbjct: 241 GVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGG 300

Query: 301 PGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSI 360
           PGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPMGVH  +NAQ+ PSI
Sbjct: 301 PGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSI 360

Query: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS-- 420
           VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS  
Sbjct: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 420

Query: 421 -------QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGS 474
                  QNFMAGAGAPAQAQAG + DQGYNSY    GSVYASPPA    HA HAGGYGS
Sbjct: 421 QAAQQLIQNFMAGAGAPAQAQAGGSADQGYNSY--TQGSVYASPPAANPGHASHAGGYGS 480

BLAST of MS005277 vs. ExPASy TrEMBL
Match: A0A6J1G2W6 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111450297 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 2.0e-232
Identity = 433/485 (89.28%), Postives = 448/485 (92.37%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLE-PE 60
           MADVDQ+Y HV+D++VDEN QIYEN Q QD TLEQDN QEPE LHEL+NEH+  TLE  E
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60

Query: 61  QKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
            KQVHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVH RIVDGLEGDNAHAP+MGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRVVEVLGDP  VHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPP-HQSWGPPQGMPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNMQM+NPQM+HMPPP HQ WGPPQG+PPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQT 360
           PNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVHA+SNAQ+ PSIVTQT
Sbjct: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS------ 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS      
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ---QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHA-GGYGSVYG 474
              QNFMAGAGA AQAQAG +TDQGYNSY A HGSVYASPPAN  AHA HA GGYGSVYG
Sbjct: 421 QLIQNFMAGAGASAQAQAGGSTDQGYNSY-AGHGSVYASPPAN-QAHASHAGGGYGSVYG 480

BLAST of MS005277 vs. ExPASy TrEMBL
Match: A0A6J1KG23 (flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC111493565 PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 2.9e-231
Identity = 431/485 (88.87%), Postives = 446/485 (91.96%), Query Frame = 0

Query: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETL-EPE 60
           MADVDQ+Y HV+D++VDEN QIYEN Q QD TLEQDN QEPE LHEL+NEH+  T    E
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATSGSDE 60

Query: 61  QKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
            KQVHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNAHAP+MGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRVVEVLGDP  VHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPP-HQSWGPPQGMPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNMQM+NPQM+HMPPP HQ WGPPQG+PPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQT 360
           PNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVHA+SNAQ+ PSIVTQT
Sbjct: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS------ 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS      
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ---QNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGG-YGSVYG 474
              QNFMAGAGA AQAQAG +TDQGYNSY A HGSVYASPPAN  AHA H GG YGSVYG
Sbjct: 421 QLIQNFMAGAGASAQAQAGGSTDQGYNSY-AGHGSVYASPPAN-QAHASHVGGDYGSVYG 480

BLAST of MS005277 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 531.9 bits (1369), Expect = 5.1e-151
Identity = 316/495 (63.84%), Postives = 356/495 (71.92%), Query Frame = 0

Query: 5   DQNYTHVEDNQVDE---NTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPE-- 64
           DQ    V+D+  D+     Q  E  Q QD   +Q   Q    + +   + VQ+ +E E  
Sbjct: 95  DQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEG 154

Query: 65  --------QKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVE 124
                   QK    ED+     EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVE
Sbjct: 155 IPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVE 214

Query: 125 ETRARIKILDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSM 184
           ETRARIKILDGPPGT ERAVMVS KEEP+S+ PP++DGLLRVH RIVDGL+G+ + AP  
Sbjct: 215 ETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPP- 274

Query: 185 GGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLG 244
             KVSTRLLV ASQAGSLIGKQGGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G
Sbjct: 275 PSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 334

Query: 245 DPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNA 304
           +P  VH+A+ELIASHLRKFLVDRSIIP FE  MQ    QMDHMPPPHQSWGPPQG  P+ 
Sbjct: 335 EPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSV 394

Query: 305 GGGPGFGPN-PQYMPPPRQFDNYYPPADM-PSVMDKQPHHGISAYGREAPMGVHASSNAQ 364
           GGG G+G N P YM PP + D+YYPP +M    M+KQPH GISAYGRE PM VH SS   
Sbjct: 395 GGG-GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS--- 454

Query: 365 AAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 424
           A P +  Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+SG
Sbjct: 455 APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSG 514

Query: 425 TAS---------QNFM--AGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAG 474
           T S         QNFM  AGA APAQ Q  A   QGYN Y A HGSVYA+ P NP     
Sbjct: 515 TGSQVQTAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPY-ATHGSVYAAAPTNP----- 574

BLAST of MS005277 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 232.6 bits (592), Expect = 6.3e-61
Identity = 172/441 (39.00%), Postives = 247/441 (56.01%), Query Frame = 0

Query: 11  VEDN---QVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQKQVHNED 70
           VE+N    + EN  +          L++++   PE L++ ++    ET  P+       D
Sbjct: 8   VENNGSINLPENENLIPAGFSAAALLDENSGAFPE-LNQPDSLAAAETTFPD-----TND 67

Query: 71  SLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTA 130
           S     E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T 
Sbjct: 68  S----AEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTP 127

Query: 131 ERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKV--STRLLVAASQ 190
           +R V++S KEEP++   PA+D +LRV +R V GL  ++       G V  S RLLVA++Q
Sbjct: 128 DRIVLISGKEEPEAYMSPAMDAVLRVFRR-VSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 187

Query: 191 AGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIAS 250
           A +LIGKQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  
Sbjct: 188 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVG 247

Query: 251 HLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMP 310
           HLR+FLVD +++P+FE        Q     P  +S      +  N    P F    +  P
Sbjct: 248 HLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREP 307

Query: 311 PPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGV-HASSNAQAAPSIVTQTTQQMQI 370
              + D+       PS        G+S Y ++  +   H+   A+ + + VTQ +Q MQI
Sbjct: 308 LFLERDSRVDSRVQPS--------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQI 367

Query: 371 PLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---------QNF 430
           P S+A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT S         Q F
Sbjct: 368 PFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEF 427

Query: 431 MAGAGAPAQAQAG-ATTDQGY 436
           +     P     G A  D GY
Sbjct: 428 IINHKEPVSVSGGYARIDSGY 427

BLAST of MS005277 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 105.9 bits (263), Expect = 9.0e-23
Identity = 106/372 (28.49%), Postives = 165/372 (44.35%), Query Frame = 0

Query: 72  VGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 131
           VG    P    E  FR+L PA KVGS+IG+ G  ++ +  E+ A IK+ D    + ER +
Sbjct: 264 VGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERII 323

Query: 132 MVSAKEEPDSTFPPAVDGLLRVHKRIVD-GLEGDNAHAPSMGGKVSTRLLVAASQAGSLI 191
           ++SA+E  +     A DG++RVH RIV+ G E   A        V  RLLV +   G L+
Sbjct: 324 VISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAA--------VVARLLVHSPYIGRLL 383

Query: 192 GKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKF 251
           GK G  +  ++  +   +RV   +    +  Q D +V+V+G+   V  A+  I   LR+ 
Sbjct: 384 GKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREA 443

Query: 252 LVDRSI-------------------IPVFEMNMQMSNPQMDHMP--PPHQ--SWGPPQGM 311
           +    +                    P F      ++P   H P  P H+    GP    
Sbjct: 444 MFPGRLPFQGMGGPPPPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDR 503

Query: 312 PPNAGGGPGFG--PNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHAS 371
           PP    GPGF   P+P    P    D +      P V     +HG +   R  P+G   S
Sbjct: 504 PP----GPGFDRPPSPMSWTPQPGIDGHPGGMVPPDV-----NHGFAL--RNEPIG---S 563

Query: 372 SNAQAAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTV 418
            N      ++T    ++ IP ++   V G   ++++YI++ SGA V + + +    E  V
Sbjct: 564 EN-----PVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLV 608

BLAST of MS005277 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-20
Identity = 84/336 (25.00%), Postives = 152/336 (45.24%), Query Frame = 0

Query: 83  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDST 142
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  + 
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 143 F-------PPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLLVAASQAGSLIGKQGG 202
           F        PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 203 TVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRS 262
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +      
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE------ 228

Query: 263 IIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGP---GFGPNPQYMPPPRQFDN 322
             P    N+  S            S G P G   +  GGP   G  P             
Sbjct: 229 -NPSRSQNLLSS------------SGGYPAGSLMSHAGGPRLVGLAPL------------ 288

Query: 323 YYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQQMQIPLSFADAV 382
                             + +YGR+A                 T+   ++  P+    +V
Sbjct: 289 ------------------MGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASV 334

Query: 383 IGTAGASISYIRRASGATVTIQETRGVPGEMTVEMS 409
           IG  GA I+ +R+ + AT+ +  +R    +  + +S
Sbjct: 349 IGKGGALINQLRQETRATIKVDSSRTEGNDCLITIS 334

BLAST of MS005277 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-20
Identity = 84/336 (25.00%), Postives = 152/336 (45.24%), Query Frame = 0

Query: 83  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDST 142
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  + 
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 143 F-------PPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLLVAASQAGSLIGKQGG 202
           F        PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 203 TVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRS 262
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +      
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE------ 228

Query: 263 IIPVFEMNMQMSNPQMDHMPPPHQSWGPPQGMPPNAGGGP---GFGPNPQYMPPPRQFDN 322
             P    N+  S            S G P G   +  GGP   G  P             
Sbjct: 229 -NPSRSQNLLSS------------SGGYPAGSLMSHAGGPRLVGLAPL------------ 288

Query: 323 YYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQQMQIPLSFADAV 382
                             + +YGR+A                 T+   ++  P+    +V
Sbjct: 289 ------------------MGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASV 334

Query: 383 IGTAGASISYIRRASGATVTIQETRGVPGEMTVEMS 409
           IG  GA I+ +R+ + AT+ +  +R    +  + +S
Sbjct: 349 IGKGGALINQLRQETRATIKVDSSRTEGNDCLITIS 334

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143057.13.3e-26198.13flowering locus K homology domain [Momordica charantia] >XP_022143058.1 flowerin... [more]
XP_023538035.13.4e-23488.52flowering locus K homology domain-like [Cucurbita pepo subsp. pepo][more]
KAG6586320.13.8e-23388.32Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. s... [more]
XP_022937898.18.4e-23388.32flowering locus K homology domain-like [Cucurbita moschata][more]
XP_022965693.11.4e-23288.11flowering locus K homology domain-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SR137.1e-15063.84Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... [more]
Q9SZH48.9e-6039.00RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ... [more]
Q5E9A31.3e-1328.09Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1[more]
Q153651.3e-1328.09Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2[more]
P603351.3e-1328.09Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CPP31.6e-26198.13flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036... [more]
A0A6J1FHB54.1e-23388.32flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1HPQ77.0e-23388.11flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC1114655... [more]
A0A6J1G2W62.0e-23289.28flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1KG232.9e-23188.87flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC1114935... [more]
Match NameE-valueIdentityDescription
AT3G04610.15.1e-15163.84RNA-binding KH domain-containing protein [more]
AT4G26000.16.3e-6139.00RNA-binding KH domain-containing protein [more]
AT1G51580.19.0e-2328.49RNA-binding KH domain-containing protein [more]
AT5G15270.21.4e-2025.00RNA-binding KH domain-containing protein [more]
AT5G15270.11.4e-2025.00RNA-binding KH domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 356..426
e-value: 0.091
score: 21.9
coord: 173..248
e-value: 5.8E-14
score: 62.4
coord: 82..162
e-value: 2.8E-8
score: 43.5
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 344..419
e-value: 3.3E-9
score: 38.3
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 348..417
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 77..137
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 166..259
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 177..244
e-value: 3.5E-15
score: 55.6
coord: 359..412
e-value: 1.2E-6
score: 28.2
coord: 86..138
e-value: 2.6E-12
score: 46.4
NoneNo IPR availableGENE3D3.30.310.210coord: 83..253
e-value: 4.9E-36
score: 125.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR10288:SF259POLY(RC)-BINDING-LIKE PROTEINcoord: 28..449
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 28..449
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 83..150
score: 13.900271
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 174..243
score: 15.640217
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 357..410
score: 11.00735
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 85..154
e-value: 4.28443E-19
score: 79.0575
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 176..244
e-value: 3.22315E-20
score: 82.1391
NoneNo IPR availableCDDcd00105KH-Icoord: 359..413
e-value: 4.8002E-8
score: 47.5547

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS005277.1MS005277.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding