MS005183 (gene) Bitter gourd (TR) v1

Overview


Name	MS005183
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAC domain-containing protein 40
Location	scaffold176: 3333716 .. 3336648 (+)
RNA-Seq Expression	MS005183
Synteny	MS005183

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATGTCCAGATCCATGTTGCTTGTCTTTTTGTTCGTTATTCTAATTATCACTTCTCAGTTCGAGTGGAGGCAACAACTGGTACCTGAGGTTGAGACTGCGGAGAACTCCCAGAAGCAGCAACAAATATCAAAGAGGGAAGAAGCAGTGAAGGAGCAGGTAATAAGTCCTCTACTGCACCATCAACTCTATCTTTCCTTTATATGGACTTGTACTTGCACTTTATAAGGGTCTAAATTGAAATGGTGTTCAATATCCCTATGTAATTTGAGAAGACTCATTGATTAGTTCAGGCGCATAGGGGTGTGGAGTATGGATTGCTTGTCGTGTCCATCATGCTACGTACACGCGTGGCATGTTCAATAGTGTCTGGTCCAGATAGGAACTTTGTAGAGCTGTAGAAGAGGGATGAACTATCAATAAATTTAACTAAACATTTTGAGGAGTTTTAGGACTAGTGAGCCAACTTCTTCCAATCACCTGCCAATTCGATGACTAGTAAAAAAACAATGATATCTTATTGTCAGTTTTCTTCTTGGATCTTTTATATGATCCAAAAATGCATGATTCCAGTTCCCATTGATGCGCTGTATTCTTTTTTAAAGTAATCCTAGTGCCAGAAATGTTTACTTTCCACACAAAGTAAAATTCATCCATTGGCTTTTCTATGAGATGCACTTCAAATAAAATATGAATTAGCTGATACCCTGGGTATGGTTTGACCGATAAACGTTTTAACGATTTAGTGCATACATGACAATAGATTTAACTTTAATAAAAGAGGCTTGCAGTGAAATATAAAATTGGGTTTGAAGTAGGATAGGATCATAGGAATGGTGTCTATTTCTAAAAGTTACGGAGAATATACTAGCTATCAGAATCTTTTAGTCTTTATTTTTAATTGTTATATTTTGATTATTGGTCAGCAATTATTTGAGCTCATGTCTGAAGAAAATGTCTCTGTTGAGTAGGAGGTAGAGACACACTGTAAATTAGAGTTTGTTCGTTCTAAATTATCAATTTATTGATATCTAAGTCATTTCTTAAAGTACTTTATGTTTCAGATGTTACCTTAATTTTATAACATTAAAAGCTTGCTTGTCCTTATAGGGAAATGAAGAAGGCATAGGTCCTAGGTATATTGTTGGATTTCTTATTCAAGTAATAACCAGATAGACAAATCTTTGGAGGTCCTGATTAGGAAAGAGATGCTCCACATAGTTGTTTGAAAAGTATCCAAATCCTCTATCAGATTGACCATAATTAACACGATTTTTGCTTTATTTAATGTTTTCTGTCTGAGGTTAGACTTTAAGTAACACTAACGATATCTATGTACTGAAAATTGTAAAACCAAAACAAGCTAACTAAAATAAGTATAAAGAATGAGGATAAGTAGTATGAGTATCAACCCCTCGAAAACCAGTTAAAGCCTAAAAGGCACTGAATTCTAAAGCCAGTTAAAGCGTAAAGGCACAAAAGTTTCAACCAGGTTAGAGAATCATTATCATTGTCATCATTTTTAGGAGTGTTGTTTGTGAGCAAATTTTTTCTATCTGCTTCCCAATTAGATGACTAGTCAAAACAAGAATTATTAATGACAAGTTGATTTTTAAATCTCTTGCATGATCCAAAAAAAGTTGTTATCCGAGTTCCATTGACGAGCTGCTTTCTTTTTTCTTCTGAATTAATTTTCATGTTCAAAACAAGGGAAAAAAAGAACAAGGCAAGTCTAGAATTTGAAACAAACTCCCAATGAGATGTCATGCTAACAATCTGTTTCATTTTTCCAAATATCTGTCCTTAAACTTATATAAATTTCAAAAATTTCCTTCCTTTGTTTATTGTTTAAAAATTGCCCTTTGAGCATACCTTTAAAGAAATTAACAGAACCAAAAAATGTGTGTATGTTACAATTTTGCCTTTGAACTATATATCAGGTTGTAATTTTTTCCATGAATTATATCTTTGTTTCCAAGTTTGTTTCTAAGTACATATCTCTGTTTCATGGAGTTAATTAATTGGTGATTTTGATATAATATAAAAGTTAGAAGATATACTTAAAACTTTGGAAGTTTAGGGGTAGAATTGAAAAATGGACTTTAGGGTTGAAACAGGTATCTGACCTTTAAGTCCATATTAAGCATTGTTTTCATATTCTTGTTACATACTCAAGAGCAGATTACCAGATTTGGCTTTCTTTAAGATGCCCTTGAAATAAAATTTTAATTTAGCTGCTACTTGGCAAAGGTTCGACCAATAATCATTTTAGTGGTTCCAGTGTTGGCATGACCCTTGATCTGATAATGCAATGTCAGAACGTTGGTTGAAACACTAATTGTTACTATTCCAAATTGAAGTTCATCTTTTACTGTGACCAATGGCAATGGCTATTAGGTATGGAGAATAGACTAGGTACCAGAATGTTACAGGTCTATACTTCAACTGTTATATTGGTGTGTTTCCAGTCAATTCTGTTAGAGACTTGAGGTAGAGAAGCACAGTAGGATACAGTTGCCATTTGATTCTAAATGATTGATTTAGTGACATCCCAAGGTTGTTCTTTAAATACTAGTTGTTAATGGTTCATTGCTACTTTGACTTTATGACAATTGATAAAAGCTTTCTTTTCTTAATATGGTGTAATCGAAAAAAGGCATAGATCCTGGCTAGGTTGTTGCAATAGCTCCTGATTAGAAAAGCATGTCTCTAAATCCTGTAAGATTGACAGGTTTCGGTATCGTAAATGTAATGAATTGTTGGTGTAGATCATATTGTCACAAGAAAGGAACATCCAGAGGCTGAATGAAGTTGTGCGAAGCCTCCGGGAGGAGTTACAGCAGTGCAAAGGCAGTAACAAAAACATTACAAATGGGACAACTCTGATGAGTTCACATATTCTTGAGCTCCAACGCCTTCGTGTATTAGACGAC

mRNA sequence

AAGATGTCCAGATCCATGTTGCTTGTCTTTTTGTTCGTTATTCTAATTATCACTTCTCAGTTCGAGTGGAGGCAACAACTGGTACCTGAGGTTGAGACTGCGGAGAACTCCCAGAAGCAGCAACAAATATCAAAGAGGGAAGAAGCAGTGAAGGAGCAGATCATATTGTCACAAGAAAGGAACATCCAGAGGCTGAATGAAGTTGTGCGAAGCCTCCGGGAGGAGTTACAGCAGTGCAAAGGCAGTAACAAAAACATTACAAATGGGACAACTCTGATGAGTTCACATATTCTTGAGCTCCAACGCCTTCGTGTATTAGACGAC

Coding sequence (CDS)

AAGATGTCCAGATCCATGTTGCTTGTCTTTTTGTTCGTTATTCTAATTATCACTTCTCAGTTCGAGTGGAGGCAACAACTGGTACCTGAGGTTGAGACTGCGGAGAACTCCCAGAAGCAGCAACAAATATCAAAGAGGGAAGAAGCAGTGAAGGAGCAGATCATATTGTCACAAGAAAGGAACATCCAGAGGCTGAATGAAGTTGTGCGAAGCCTCCGGGAGGAGTTACAGCAGTGCAAAGGCAGTAACAAAAACATTACAAATGGGACAACTCTGATGAGTTCACATATTCTTGAGCTCCAACGCCTTCGTGTATTAGACGAC

Protein sequence

KMSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD

Homology

[Close]

BLAST of MS005183 vs. NCBI nr
Match: XP_022153051.1 (uncharacterized protein LOC111020647 [Momordica charantia] >XP_022153052.1 uncharacterized protein LOC111020647 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 60

Query: 62  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRV 106
           IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRV
Sbjct: 61  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRV 104

[Close]

BLAST of MS005183 vs. NCBI nr
Match: XP_022944563.1 (uncharacterized protein LOC111448980 [Cucurbita moschata] >XP_022985896.1 uncharacterized protein LOC111483810 [Cucurbita maxima])

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 89/107 (83.18%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERN
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERN 60

Query: 62  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD 109
           IQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+RL VL+D
Sbjct: 61  IQRLNEVVRSLREQLQQCRG--RNITNGTALLSGHILELERLHVLED 105

[Close]

BLAST of MS005183 vs. NCBI nr
Match: XP_023512164.1 (uncharacterized protein LOC111776968 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 3.7e-35
Identity = 89/107 (83.18%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEV T  NSQKQQQIS REEAVKE+I+LSQERN
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVHTRVNSQKQQQISTREEAVKEKILLSQERN 60

Query: 62  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD 109
           IQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+RL VL+D
Sbjct: 61  IQRLNEVVRSLREQLQQCRG--RNITNGTALLSGHILELERLHVLED 105

[Close]

BLAST of MS005183 vs. NCBI nr
Match: KAG7010338.1 (hypothetical protein SDJN02_27131, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.5 bits (389), Expect = 5.4e-34
Identity = 87/104 (83.65%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERN
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERN 60

Query: 62  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRV 106
           IQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+RL V
Sbjct: 61  IQRLNEVVRSLREQLQQCRG--RNITNGTALLSGHILELERLHV 102

[Close]

BLAST of MS005183 vs. NCBI nr
Match: XP_016900731.1 (PREDICTED: NAC domain-containing protein 40 [Cucumis melo] >KAA0061724.1 NAC domain-containing protein 40 [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 9.2e-34
Identity = 88/108 (81.48%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQER 61
           MSRSMLLVFLFVILIITSQFEWRQQLVPEV+T  NSQK QQQIS REEAVKE+I+LSQER
Sbjct: 335 MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQQISTREEAVKEKILLSQER 394

Query: 62  NIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD 109
           NIQRLNEVVRSLR++LQQC+G  +NITNGT L++ HILEL+RL VL+D
Sbjct: 395 NIQRLNEVVRSLRQQLQQCRG--RNITNGTALLTGHILELERLHVLED 440

[Close]

BLAST of MS005183 vs. ExPASy TrEMBL
Match: A0A6J1DHW9 (uncharacterized protein LOC111020647 OS=Momordica charantia OX=3673 GN=LOC111020647 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.1e-44
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 60

Query: 62  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRV 106
           IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRV
Sbjct: 61  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRV 104

[Close]

BLAST of MS005183 vs. ExPASy TrEMBL
Match: A0A6J1J9H8 (uncharacterized protein LOC111483810 OS=Cucurbita maxima OX=3661 GN=LOC111483810 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 89/107 (83.18%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERN
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERN 60

Query: 62  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD 109
           IQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+RL VL+D
Sbjct: 61  IQRLNEVVRSLREQLQQCRG--RNITNGTALLSGHILELERLHVLED 105

[Close]

BLAST of MS005183 vs. ExPASy TrEMBL
Match: A0A6J1FY60 (uncharacterized protein LOC111448980 OS=Cucurbita moschata OX=3662 GN=LOC111448980 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 89/107 (83.18%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERN
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERN 60

Query: 62  IQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD 109
           IQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+RL VL+D
Sbjct: 61  IQRLNEVVRSLREQLQQCRG--RNITNGTALLSGHILELERLHVLED 105

[Close]

BLAST of MS005183 vs. ExPASy TrEMBL
Match: A0A5A7V382 (NAC domain-containing protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00990 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.4e-34
Identity = 88/108 (81.48%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQER 61
           MSRSMLLVFLFVILIITSQFEWRQQLVPEV+T  NSQK QQQIS REEAVKE+I+LSQER
Sbjct: 335 MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQQISTREEAVKEKILLSQER 394

Query: 62  NIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD 109
           NIQRLNEVVRSLR++LQQC+G  +NITNGT L++ HILEL+RL VL+D
Sbjct: 395 NIQRLNEVVRSLRQQLQQCRG--RNITNGTALLTGHILELERLHVLED 440

[Close]

BLAST of MS005183 vs. ExPASy TrEMBL
Match: A0A0A0KEF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425770 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.4e-34
Identity = 88/108 (81.48%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQER 61
           MSRSMLLVFLFVILIITSQFEWRQQLVPEV++  NSQK QQQIS REEAVKE+I+LSQER
Sbjct: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQER 61

Query: 62  NIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD 109
           NIQRLNEVVRSLR++LQQC+G  +NITNGT L+S+HILEL+RL VL+D
Sbjct: 62  NIQRLNEVVRSLRQQLQQCRG--RNITNGTALLSAHILELERLHVLED 107

[Close]

BLAST of MS005183 vs. TAIR 10
Match: AT5G22280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 63/109 (57.80%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERN 61
           MSR ++LVFL VILI+TSQFEWRQ L+        SQK QQI+KREEAVKE+IILSQER+
Sbjct: 1   MSRPIMLVFLLVILIVTSQFEWRQPLLELDAAPSLSQKHQQIAKREEAVKEKIILSQERH 60

Query: 62  IQRLNEVVRSLREELQQCKGSN--KNITNGTTLMSSHILELQRLRVLDD 109
           IQRLN++VRSL+ +LQ+CKG N  +N T  T+  +   +EL+R  +++D
Sbjct: 61  IQRLNDLVRSLQMQLQRCKGENETRNATE-TSHNNKQFIELERKHIVED 108

[Close]

BLAST of MS005183 vs. TAIR 10
Match: AT3G44280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 65/109 (59.63%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVETA-ENSQKQQQISKREEAVKEQIILSQER 61
           MS+ +LLV L VILI+TSQFEWRQ LV E++TA  +SQKQQQIS REEAVKE+II+SQER
Sbjct: 1   MSKPVLLVCLLVILIVTSQFEWRQPLV-ELDTATSSSQKQQQISDREEAVKEKIIISQER 60

Query: 62  NIQRLNEVVRSLREELQQCKGSNKNITNGTTL--MSSHILELQRLRVLD 108
           +IQRLNE+VRSL+ +L QCKG N+   N T    ++   +E++R ++L+
Sbjct: 61  HIQRLNELVRSLQLQLLQCKGENET-QNATKSYHINKQFIEVERKQILE 107

[Close]

BLAST of MS005183 vs. TAIR 10
Match: AT5G22280.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-16
Identity = 51/99 (51.52%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 12  FVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRS 71
           F   +I   FEWRQ L+        SQK QQI+KREEAVKE+IILSQER+IQRLN++VRS
Sbjct: 3   FDFTVINRSFEWRQPLLELDAAPSLSQKHQQIAKREEAVKEKIILSQERHIQRLNDLVRS 62

Query: 72  LREELQQCKGSN--KNITNGTTLMSSHILELQRLRVLDD 109
           L+ +LQ+CKG N  +N T  T+  +   +EL+R  +++D
Sbjct: 63  LQMQLQRCKGENETRNATE-TSHNNKQFIELERKHIVED 100

[Close]

BLAST of MS005183 vs. TAIR 10
Match: AT5G06265.1 (hyaluronan mediated motility receptor-related )

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 37/88 (42.05%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 2  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAE-----NSQKQQQISKREEAVKEQIIL 61
          M+RS +L+F+ + +++TSQFEW +Q+  E ET+      + ++QQ I + +E+V+ + IL
Sbjct: 1  MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKIL 60

Query: 62 SQERNIQRLNEVVRSLREELQQCKGSNK 85
           QE+ IQ+LNE+VR LR +L QC+  N+
Sbjct: 61 FQEKKIQKLNELVRDLRRQLLQCRNENQ 88

[Close]

BLAST of MS005183 vs. TAIR 10
Match: AT5G06265.2 (hyaluronan mediated motility receptor-related )

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 37/88 (42.05%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 2  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAE-----NSQKQQQISKREEAVKEQIIL 61
          M+RS +L+F+ + +++TSQFEW +Q+  E ET+      + ++QQ I + +E+V+ + IL
Sbjct: 1  MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKIL 60

Query: 62 SQERNIQRLNEVVRSLREELQQCKGSNK 85
           QE+ IQ+LNE+VR LR +L QC+  N+
Sbjct: 61 FQEKKIQKLNELVRDLRRQLLQCRNENQ 88

The following BLAST results are available for this feature:

BLAST of MS005183 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153051.1	1.7e-43	100.00	uncharacterized protein LOC111020647 [Momordica charantia] >XP_022153052.1 uncha...	[more]
XP_022944563.1	2.2e-35	83.18	uncharacterized protein LOC111448980 [Cucurbita moschata] >XP_022985896.1 unchar...	[more]
XP_023512164.1	3.7e-35	83.18	uncharacterized protein LOC111776968 [Cucurbita pepo subsp. pepo]	[more]
KAG7010338.1	5.4e-34	83.65	hypothetical protein SDJN02_27131, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_016900731.1	9.2e-34	81.48	PREDICTED: NAC domain-containing protein 40 [Cucumis melo] >KAA0061724.1 NAC dom...	[more]

BLAST of MS005183 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS005183 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHW9	8.1e-44	100.00	uncharacterized protein LOC111020647 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1J9H8	1.1e-35	83.18	uncharacterized protein LOC111483810 OS=Cucurbita maxima OX=3661 GN=LOC111483810...	[more]
A0A6J1FY60	1.1e-35	83.18	uncharacterized protein LOC111448980 OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A5A7V382	4.4e-34	81.48	NAC domain-containing protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A0A0KEF2	4.4e-34	81.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425770 PE=4 SV=1	[more]

BLAST of MS005183 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22280.1	1.7e-22	57.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G44280.1	2.5e-21	59.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G22280.2	2.4e-16	51.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G06265.1	1.2e-10	42.05	hyaluronan mediated motility receptor-related	[more]
AT5G06265.2	1.2e-10	42.05	hyaluronan mediated motility receptor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..82
None	No IPR available	PANTHER	PTHR34564	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE G	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005183.1	MS005183.1	mRNA