MS005090 (gene) Bitter gourd (TR) v1

Overview


Name	MS005090
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor TCP15-like
Location	scaffold176: 2633772 .. 2634305 (-)
RNA-Seq Expression	MS005090
Synteny	MS005090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCAAAAAACATGAGAGTCAAGAAGGCTACATCTAGCTCTCCAAGAAATGCACCAAAATCCAATTCCAATTCACCAAATGCCTCAGAGTCTAAGCCCCTGCCTTCCAAAGCTCCGAAAGATCGCCACGCTAAGGTTCACGGGCGTGATCGTCGTATCCGCCTTCCACCGTTGTGTGCAGCTCGAGTGTTTCAGCTCACTCGAGAGCTCGGCAACAAAACGGATGGTCAGACTGTGGAGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCTATAACTGGTAAAGATATTGCCTCTGCTGCTCTAAACCTGGCTGCCTGCAACCCCTCCCCATCTTCATCAAACCTTTCTGCTACTACAAGTTGTTTTCAACAAGAAACTAACAACTACACGTTCCCAATGCCTAACATACCTTTGCCAAATTATGAATTCGATTTGGTCTCCGATTTTGATATGGAGCTTTTTGCTCATCATATCACCACGCTGCAAGAAGTGGCAGAAAATTCGGAGCAGGACGACGGCCAAGAT

mRNA sequence

ATGGGATCAAAAAACATGAGAGTCAAGAAGGCTACATCTAGCTCTCCAAGAAATGCACCAAAATCCAATTCCAATTCACCAAATGCCTCAGAGTCTAAGCCCCTGCCTTCCAAAGCTCCGAAAGATCGCCACGCTAAGGTTCACGGGCGTGATCGTCGTATCCGCCTTCCACCGTTGTGTGCAGCTCGAGTGTTTCAGCTCACTCGAGAGCTCGGCAACAAAACGGATGGTCAGACTGTGGAGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCTATAACTGGTAAAGATATTGCCTCTGCTGCTCTAAACCTGGCTGCCTGCAACCCCTCCCCATCTTCATCAAACCTTTCTGCTACTACAAGTTGTTTTCAACAAGAAACTAACAACTACACGTTCCCAATGCCTAACATACCTTTGCCAAATTATGAATTCGATTTGGTCTCCGATTTTGATATGGAGCTTTTTGCTCATCATATCACCACGCTGCAAGAAGTGGCAGAAAATTCGGAGCAGGACGACGGCCAAGAT

Coding sequence (CDS)

ATGGGATCAAAAAACATGAGAGTCAAGAAGGCTACATCTAGCTCTCCAAGAAATGCACCAAAATCCAATTCCAATTCACCAAATGCCTCAGAGTCTAAGCCCCTGCCTTCCAAAGCTCCGAAAGATCGCCACGCTAAGGTTCACGGGCGTGATCGTCGTATCCGCCTTCCACCGTTGTGTGCAGCTCGAGTGTTTCAGCTCACTCGAGAGCTCGGCAACAAAACGGATGGTCAGACTGTGGAGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCTATAACTGGTAAAGATATTGCCTCTGCTGCTCTAAACCTGGCTGCCTGCAACCCCTCCCCATCTTCATCAAACCTTTCTGCTACTACAAGTTGTTTTCAACAAGAAACTAACAACTACACGTTCCCAATGCCTAACATACCTTTGCCAAATTATGAATTCGATTTGGTCTCCGATTTTGATATGGAGCTTTTTGCTCATCATATCACCACGCTGCAAGAAGTGGCAGAAAATTCGGAGCAGGACGACGGCCAAGAT

Protein sequence

MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSATTSCFQQETNNYTFPMPNIPLPNYEFDLVSDFDMELFAHHITTLQEVAENSEQDDGQD

Homology

[Close]

BLAST of MS005090 vs. NCBI nr
Match: XP_022140679.1 (transcription factor TCP15-like [Momordica charantia])

HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA 120

Query: 121 TTSCFQQETNNYTFPMPNIPLPNYEFDLVSDFDMELFAHHITTLQEVAENSEQDDGQD 179
           TTSCFQQETNNYTFPMPNIPLPNYEFDLVSDFDMELFAHHITTLQEVAEN EQDDGQD
Sbjct: 121 TTSCFQQETNNYTFPMPNIPLPNYEFDLVSDFDMELFAHHITTLQEVAENLEQDDGQD 178

[Close]

BLAST of MS005090 vs. NCBI nr
Match: XP_038900506.1 (transcription factor TCP16-like [Benincasa hispida])

HSP 1 Score: 264.6 bits (675), Expect = 6.1e-67
Identity = 147/184 (79.89%), Postives = 158/184 (85.87%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNM+VKKATS+SPRNAPK   NSPNASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMKVKKATSNSPRNAPK--PNSPNASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA L+L  C P    SSSNL
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLPGCKPFDPSSSSNL 120

Query: 121 SATTSCFQQ--ETNNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENSEQD 179
           S TT+ F++  + NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI  LQEVAENSE++
Sbjct: 121 STTTNFFEETFDGNNYAFPMANECIPLPNYEFDLVSDFDMELFAHHIAMLQEVAENSERE 180

[Close]

BLAST of MS005090 vs. NCBI nr
Match: XP_008465370.1 (PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription factor TCP7 [Cucumis melo var. makuwa] >TYK22396.1 transcription factor TCP7 [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65
Identity = 150/188 (79.79%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKK TS+SPRNAPK   NSP ASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPK--LNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA L+L  C+    PSSSN+
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNI 120

Query: 121 -SATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENSE 179
            S TTS F++ET   NNY FP  N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAENSE
Sbjct: 121 NSTTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE 180

[Close]

BLAST of MS005090 vs. NCBI nr
Match: XP_004145813.1 (transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa_020689 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 7.4e-65
Identity = 147/186 (79.03%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSK+MRVK+ TS+SPRNAPK   NSP ASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKHMRVKRPTSNSPRNAPK--PNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA L+L  C+    PSSSN 
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNT 120

Query: 121 -SATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENSE 179
            S TTS F++ET   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAENSE
Sbjct: 121 NSTTTSYFEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE 180

[Close]

BLAST of MS005090 vs. NCBI nr
Match: XP_022996075.1 (transcription factor TCP14-like [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 6.5e-61
Identity = 135/180 (75.00%), Postives = 145/180 (80.56%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKKATS+SPR         PNASESKP+PSKA KDRHAKV GRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSNSPRGV-------PNASESKPIPSKALKDRHAKVQGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAA  L  C P+  SS+ + 
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGCKPTDPSSSTTT 120

Query: 121 TTSCFQQETNNYTFPM--PNIPLPNYEFDLVSDFDMELFAHHITTLQEVAENSEQDDGQD 179
           TT+    + NNY FP     +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE++   D
Sbjct: 121 TTTAKTFDGNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSEREAEDD 173

[Close]

BLAST of MS005090 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 12  TSSSPRNAPKSNSNSPNASESKPLPSK-APKDRHAKVHGRDRRIRLPPLCAARVFQLTRE 71
           +SSS   A  S ++ PN+   KP P + + KDRH KV GR RRIR+P +CAARVFQLTRE
Sbjct: 23  SSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRE 82

Query: 72  LGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSATTSCFQQETN 131
           LG+K+DG+T+EWLL++AEP++IA TG     A  N  + N S  SS  S + +  +   +
Sbjct: 83  LGHKSDGETIEWLLQQAEPAVIAATGTGTIPA--NFTSLNISLRSSRSSLSAAHLRTTPS 142

Query: 132 NYTFPMPN 139
           +Y F  P+
Sbjct: 143 SYYFHSPH 148

[Close]

BLAST of MS005090 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 29  ASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAE 88
           A++  PL   + KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AE
Sbjct: 106 AAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 165

Query: 89  PSIIAITGKDIASAALNLAACNPSPSSSNLS 120
           PS+IA TG     A  N  + N S  SS  S
Sbjct: 166 PSVIAATGTGTIPA--NFTSLNISLRSSGSS 194

[Close]

BLAST of MS005090 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 22  SNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVE 81
           SN    NA +  P      KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+E
Sbjct: 18  SNKGPLNAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIE 77

Query: 82  WLLKKAEPSIIAITGKDIASAALNLAACNPS 113
           WLL++AEPSIIA TG     A+ + A+ + S
Sbjct: 78  WLLRQAEPSIIAATGTGTTPASFSTASLSTS 103

[Close]

BLAST of MS005090 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.4e-18
Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 23  NSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEW 82
           N  S N ++  P  S + KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++W
Sbjct: 62  NKKSQNQNQLGPKRS-SNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQW 121

Query: 83  LLKKAEPSIIAITGKDI--ASAALNLAACNPSPSSSNLSA 121
           LL++AEPSIIA TG     ASA  + AA +      +L+A
Sbjct: 122 LLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSLTA 160

[Close]

BLAST of MS005090 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.1e-18
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 2   GSKNMRVKKATSSSPRNAPKSNSN--SPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPL 61
           G     V  + S  PR+ P  +S   + +++ +     ++ KDRH KV GR RRIR+P L
Sbjct: 20  GGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPAL 79

Query: 62  CAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLS 121
           CAARVFQLTRELG+K+DG+T+EWLL++AEP+I+A TG     A  +  + +   S S LS
Sbjct: 80  CAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLS 139

Query: 122 ATTS 124
           A  S
Sbjct: 140 APPS 143

[Close]

BLAST of MS005090 vs. ExPASy TrEMBL
Match: A0A6J1CGC4 (transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA 120

Query: 121 TTSCFQQETNNYTFPMPNIPLPNYEFDLVSDFDMELFAHHITTLQEVAENSEQDDGQD 179
           TTSCFQQETNNYTFPMPNIPLPNYEFDLVSDFDMELFAHHITTLQEVAEN EQDDGQD
Sbjct: 121 TTSCFQQETNNYTFPMPNIPLPNYEFDLVSDFDMELFAHHITTLQEVAENLEQDDGQD 178

[Close]

BLAST of MS005090 vs. ExPASy TrEMBL
Match: A0A5A7T0X8 (Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00200 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.3e-66
Identity = 150/188 (79.79%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKK TS+SPRNAPK   NSP ASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPK--LNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA L+L  C+    PSSSN+
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNI 120

Query: 121 -SATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENSE 179
            S TTS F++ET   NNY FP  N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAENSE
Sbjct: 121 NSTTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE 180

[Close]

BLAST of MS005090 vs. ExPASy TrEMBL
Match: A0A1S3CNQ2 (transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.3e-66
Identity = 150/188 (79.79%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKK TS+SPRNAPK   NSP ASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPK--LNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA L+L  C+    PSSSN+
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNI 120

Query: 121 -SATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENSE 179
            S TTS F++ET   NNY FP  N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAENSE
Sbjct: 121 NSTTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE 180

[Close]

BLAST of MS005090 vs. ExPASy TrEMBL
Match: A0A0A0KDC7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.6e-65
Identity = 147/186 (79.03%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSK+MRVK+ TS+SPRNAPK   NSP ASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKHMRVKRPTSNSPRNAPK--PNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA L+L  C+    PSSSN 
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNT 120

Query: 121 -SATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENSE 179
            S TTS F++ET   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAENSE
Sbjct: 121 NSTTTSYFEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE 180

[Close]

BLAST of MS005090 vs. ExPASy TrEMBL
Match: A0A6J1K5P6 (transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.2e-61
Identity = 135/180 (75.00%), Postives = 145/180 (80.56%), Query Frame = 0


Query: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKKATS+SPR         PNASESKP+PSKA KDRHAKV GRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSNSPRGV-------PNASESKPIPSKALKDRHAKVQGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSA 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAA  L  C P+  SS+ + 
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGCKPTDPSSSTTT 120

Query: 121 TTSCFQQETNNYTFPM--PNIPLPNYEFDLVSDFDMELFAHHITTLQEVAENSEQDDGQD 179
           TT+    + NNY FP     +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE++   D
Sbjct: 121 TTTAKTFDGNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSEREAEDD 173

[Close]

BLAST of MS005090 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 12  TSSSPRNAPKSNSNSPNASESKPLPSK-APKDRHAKVHGRDRRIRLPPLCAARVFQLTRE 71
           +SSS   A  S ++ PN+   KP P + + KDRH KV GR RRIR+P +CAARVFQLTRE
Sbjct: 23  SSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRE 82

Query: 72  LGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLSATTSCFQQETN 131
           LG+K+DG+T+EWLL++AEP++IA TG     A  N  + N S  SS  S + +  +   +
Sbjct: 83  LGHKSDGETIEWLLQQAEPAVIAATGTGTIPA--NFTSLNISLRSSRSSLSAAHLRTTPS 142

Query: 132 NYTFPMPN 139
           +Y F  P+
Sbjct: 143 SYYFHSPH 148

[Close]

BLAST of MS005090 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 29  ASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAE 88
           A++  PL   + KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AE
Sbjct: 106 AAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 165

Query: 89  PSIIAITGKDIASAALNLAACNPSPSSSNLS 120
           PS+IA TG     A  N  + N S  SS  S
Sbjct: 166 PSVIAATGTGTIPA--NFTSLNISLRSSGSS 194

[Close]

BLAST of MS005090 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 22  SNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVE 81
           SN    NA +  P      KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+E
Sbjct: 18  SNKGPLNAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIE 77

Query: 82  WLLKKAEPSIIAITGKDIASAALNLAACNPS 113
           WLL++AEPSIIA TG     A+ + A+ + S
Sbjct: 78  WLLRQAEPSIIAATGTGTTPASFSTASLSTS 103

[Close]

BLAST of MS005090 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 92.4 bits (228), Expect = 3.9e-19
Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 23  NSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEW 82
           N  S N ++  P  S + KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++W
Sbjct: 62  NKKSQNQNQLGPKRS-SNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQW 121

Query: 83  LLKKAEPSIIAITGKDI--ASAALNLAACNPSPSSSNLSA 121
           LL++AEPSIIA TG     ASA  + AA +      +L+A
Sbjct: 122 LLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSLTA 160

[Close]

BLAST of MS005090 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 92.0 bits (227), Expect = 5.0e-19
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 2   GSKNMRVKKATSSSPRNAPKSNSN--SPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPL 61
           G     V  + S  PR+ P  +S   + +++ +     ++ KDRH KV GR RRIR+P L
Sbjct: 20  GGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPAL 79

Query: 62  CAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPSPSSSNLS 121
           CAARVFQLTRELG+K+DG+T+EWLL++AEP+I+A TG     A  +  + +   S S LS
Sbjct: 80  CAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLS 139

Query: 122 ATTS 124
           A  S
Sbjct: 140 APPS 143

The following BLAST results are available for this feature:

BLAST of MS005090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140679.1	2.3e-90	99.44	transcription factor TCP15-like [Momordica charantia]	[more]
XP_038900506.1	6.1e-67	79.89	transcription factor TCP16-like [Benincasa hispida]	[more]
XP_008465370.1	1.5e-65	79.79	PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription ...	[more]
XP_004145813.1	7.4e-65	79.03	transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa...	[more]
XP_022996075.1	6.5e-61	75.00	transcription factor TCP14-like [Cucurbita maxima]	[more]

BLAST of MS005090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9L2	2.0e-20	47.66	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
Q93Z00	2.2e-19	58.24	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9FTA2	1.4e-18	57.14	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q9LSD5	5.4e-18	54.00	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q9C518	7.1e-18	45.16	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]

BLAST of MS005090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGC4	1.1e-90	99.44	transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 P...	[more]
A0A5A7T0X8	7.3e-66	79.79	Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CNQ2	7.3e-66	79.79	transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1	[more]
A0A0A0KDC7	3.6e-65	79.03	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV...	[more]
A0A6J1K5P6	3.2e-61	75.00	transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4...	[more]

BLAST of MS005090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69690.1	1.4e-21	47.66	TCP family transcription factor	[more]
AT3G47620.1	1.6e-20	58.24	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT5G08330.1	1.0e-19	57.14	TCP family transcription factor	[more]
AT3G27010.1	3.9e-19	54.00	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G58100.1	5.0e-19	45.16	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 40..130 e-value: 3.5E-27 score: 95.9
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 40..94 score: 24.771469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR31072:SF123	TRANSCRIPTION FACTOR PCF1-LIKE	coord: 12..177
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 12..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005090.1	MS005090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity