MS005072 (gene) Bitter gourd (TR) v1

Overview


Name	MS005072
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of unknown function, DUF584
Location	scaffold176: 2463520 .. 2464023 (+)
RNA-Seq Expression	MS005072
Synteny	MS005072

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCGGAAAAAGCTGTTACGGCCGCTCCAACTATCGGTTCCTCCCCGGCGGCCACCTCCACCACTCGTTCGCTTCCGACTCGTCGTTTGAACTCAGCGAATCTGACATCTACAACTCGGCGAGTTCGAAATCGCCGGAGATGCGGAGATCCGTGGCTCCGGGAGCGCGAATCTCGAAGAAACCGTCGCCGAAACGATCGGTGGAGTCGGGGGATTGGGGAGGCGCGCGCGGTGGTGGTGCTTCGTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTACAGAGAGAAAAGTAGGTGGGAATACGATGAGGATTCGGAGGGAGATGGGGATAGTGAGGATGGAATGAGAGTGCCGCCGCACGAGTTTTTGGCGAGGACGAGGATGGCATCTTTTTCGGTGCACGAAGGAATCGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTGAGAAATGCAATATGGGAAAAAACTGGGTTCCAGGAC

mRNA sequence

ATGGCGACCGGAAAAAGCTGTTACGGCCGCTCCAACTATCGGTTCCTCCCCGGCGGCCACCTCCACCACTCGTTCGCTTCCGACTCGTCGTTTGAACTCAGCGAATCTGACATCTACAACTCGGCGAGTTCGAAATCGCCGGAGATGCGGAGATCCGTGGCTCCGGGAGCGCGAATCTCGAAGAAACCGTCGCCGAAACGATCGGTGGAGTCGGGGGATTGGGGAGGCGCGCGCGGTGGTGGTGCTTCGTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTACAGAGAGAAAAGTAGGTGGGAATACGATGAGGATTCGGAGGGAGATGGGGATAGTGAGGATGGAATGAGAGTGCCGCCGCACGAGTTTTTGGCGAGGACGAGGATGGCATCTTTTTCGGTGCACGAAGGAATCGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTGAGAAATGCAATATGGGAAAAAACTGGGTTCCAGGAC

Coding sequence (CDS)

ATGGCGACCGGAAAAAGCTGTTACGGCCGCTCCAACTATCGGTTCCTCCCCGGCGGCCACCTCCACCACTCGTTCGCTTCCGACTCGTCGTTTGAACTCAGCGAATCTGACATCTACAACTCGGCGAGTTCGAAATCGCCGGAGATGCGGAGATCCGTGGCTCCGGGAGCGCGAATCTCGAAGAAACCGTCGCCGAAACGATCGGTGGAGTCGGGGGATTGGGGAGGCGCGCGCGGTGGTGGTGCTTCGTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTACAGAGAGAAAAGTAGGTGGGAATACGATGAGGATTCGGAGGGAGATGGGGATAGTGAGGATGGAATGAGAGTGCCGCCGCACGAGTTTTTGGCGAGGACGAGGATGGCATCTTTTTCGGTGCACGAAGGAATCGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTGAGAAATGCAATATGGGAAAAAACTGGGTTCCAGGAC

Protein sequence

MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARISKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD

Homology

[Close]

BLAST of MS005072 vs. NCBI nr
Match: XP_022140623.1 (uncharacterized protein LOC111011233 [Momordica charantia])

HSP 1 Score: 341.3 bits (874), Expect = 4.8e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS 60
           MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS
Sbjct: 1   MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS 60

Query: 61  KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSED 120
           KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSED
Sbjct: 61  KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSED 120

Query: 121 GMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           GMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 GMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 168

[Close]

BLAST of MS005072 vs. NCBI nr
Match: XP_038901889.1 (uncharacterized protein LOC120088567 [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 1.6e-56
Identity = 131/176 (74.43%), Postives = 139/176 (78.98%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGG----HLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPG 60
           MATGKSCYGRSNYRFL G     H HHSF SD SFEL+ESDIYNS SSKSP   RS A  
Sbjct: 1   MATGKSCYGRSNYRFLTGDIAGHHHHHSFTSDLSFELNESDIYNSGSSKSP---RSPATA 60

Query: 61  ARISKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDG 120
            RISKKPS KR VE+G      GGGASS PVNIPDWSKILKEEYREK R EY++D E D 
Sbjct: 61  TRISKKPSSKR-VEAG------GGGASSFPVNIPDWSKILKEEYREK-RMEYEDDLEEDE 120

Query: 121 DSEDGMRVPPHEFL----ARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           D ++ MRVPPHEFL    ARTR+ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF+D
Sbjct: 121 DEDEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 165

[Close]

BLAST of MS005072 vs. NCBI nr
Match: XP_022985841.1 (uncharacterized protein LOC111483768 [Cucurbita maxima])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 120/169 (71.01%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLH-HSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARI 60
           MATGKSCYGRS+YRFL G H   HSF S+ SFE +ESDI+N  SS+SPE R+S AP A I
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNPGSSESPERRKSPAPAASI 60

Query: 61  SKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSE 120
           SKK S KR       G   GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D +
Sbjct: 61  SKKGSSKR-------GEGGGGGASSLPVNIPDWSKILKEEYREERSLEYEGDLEEESDGD 120

Query: 121 DGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           + MRVPPHEFLAR+R ASFSV EGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 EEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of MS005072 vs. NCBI nr
Match: KAG7010627.1 (hypothetical protein SDJN02_27421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-54
Identity = 120/169 (71.01%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLH-HSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARI 60
           MATGKSCYGRS+YRFL G H   HSF S+ SFE +ESDI+N  SS+SPE RRS  PG  I
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60

Query: 61  SKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSE 120
           SKK S KR       G   GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D +
Sbjct: 61  SKKGSSKR-------GEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGD 120

Query: 121 DGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           + MRVPPHEFLAR+R ASFSV EGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 EEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of MS005072 vs. NCBI nr
Match: XP_023513244.1 (uncharacterized protein LOC111777757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.2 bits (565), Expect = 3.3e-54
Identity = 120/169 (71.01%), Postives = 133/169 (78.70%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLH-HSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARI 60
           MATGKSCYGRS+YRFL G H   HSF S+ SFE +ESDI+N   S+SPE R+S  P A I
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNPGGSESPERRKSPTPAASI 60

Query: 61  SKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSE 120
           SKK S KR    G+ GG  GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D +
Sbjct: 61  SKKGSSKR----GEGGG--GGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGD 120

Query: 121 DGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           + MRVPPHEFLAR+R ASFSV EGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 EEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163

[Close]

BLAST of MS005072 vs. ExPASy TrEMBL
Match: A0A6J1CIE6 (uncharacterized protein LOC111011233 OS=Momordica charantia OX=3673 GN=LOC111011233 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.3e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS 60
           MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS
Sbjct: 1   MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS 60

Query: 61  KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSED 120
           KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSED
Sbjct: 61  KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSED 120

Query: 121 GMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           GMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 GMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 168

[Close]

BLAST of MS005072 vs. ExPASy TrEMBL
Match: A0A6J1J9C1 (uncharacterized protein LOC111483768 OS=Cucurbita maxima OX=3661 GN=LOC111483768 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.4e-55
Identity = 120/169 (71.01%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLH-HSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARI 60
           MATGKSCYGRS+YRFL G H   HSF S+ SFE +ESDI+N  SS+SPE R+S AP A I
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNPGSSESPERRKSPAPAASI 60

Query: 61  SKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSE 120
           SKK S KR       G   GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D +
Sbjct: 61  SKKGSSKR-------GEGGGGGASSLPVNIPDWSKILKEEYREERSLEYEGDLEEESDGD 120

Query: 121 DGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           + MRVPPHEFLAR+R ASFSV EGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 EEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of MS005072 vs. ExPASy TrEMBL
Match: A0A6J1FVG2 (uncharacterized protein LOC111448807 OS=Cucurbita moschata OX=3662 GN=LOC111448807 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.6e-54
Identity = 119/169 (70.41%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLH-HSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARI 60
           MATGK+CYGRS+YRFL G H   HSF S+ SFE +ESDI+N  SS+SPE RRS  PG  I
Sbjct: 1   MATGKNCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60

Query: 61  SKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSE 120
           SKK S KR       G   GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D +
Sbjct: 61  SKKGSSKR-------GEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGD 120

Query: 121 DGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           + MRVPPHEFLAR+R ASFSV EGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 EEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of MS005072 vs. ExPASy TrEMBL
Match: A0A6J1KAF0 (uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.7e-54
Identity = 127/175 (72.57%), Postives = 132/175 (75.43%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPG---GHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGA 60
           MA+GKSCYGRSNYRFL G   GH HHSF SD  FEL+ESDIYNS S  SPE+RRS  P  
Sbjct: 1   MASGKSCYGRSNYRFLSGDISGH-HHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAK 60

Query: 61  RISKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGD 120
           RISKKPS    VE         GGASSLPVNIPDWSKILKEEYREK   EYDED E D D
Sbjct: 61  RISKKPS-SNPVE-------LRGGASSLPVNIPDWSKILKEEYREKRSVEYDEDMEEDED 120

Query: 121 SEDGMRVPPHEFL----ARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
             + MRVPPHEFL    ARTR ASFSVHEGIGRTLKGRDLSRVRNAIWEK GF+D
Sbjct: 121 DWEEMRVPPHEFLARQMARTRTASFSVHEGIGRTLKGRDLSRVRNAIWEKIGFED 166

[Close]

BLAST of MS005072 vs. ExPASy TrEMBL
Match: A0A5A7SXR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00170 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.3e-52
Identity = 120/176 (68.18%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGG----HLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPG 60
           MATGKSCYGRSNYRFL G     H HHSF SD SFEL+ESDIYNS +++SP         
Sbjct: 1   MATGKSCYGRSNYRFLTGDISGHHHHHSFTSDFSFELNESDIYNSGTARSP--------- 60

Query: 61  ARISKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDG 120
            RI KK    + VE        GGGASSLPVNIPDWSKILKEEYREK   EY +D E D 
Sbjct: 61  TRIPKKKISSKRVEV-----QGGGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDE 120

Query: 121 DSEDGMRVPPHEFL----ARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           D E+ MRVPPHEFL    ARTR+ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF+D
Sbjct: 121 DEEEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 162

[Close]

BLAST of MS005072 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 169.9 bits (429), Expect = 1.8e-42
Identity = 94/169 (55.62%), Postives = 114/169 (67.46%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS 60
           MATGKS Y R +YRFL      +  ASDS  E  ESD++N   S SP+  R ++   R  
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHSDSPDFCRKISSSVRSG 60

Query: 61  KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSED 120
           KK S + S  S          ASSLPVN+PDWSKIL+ EYR+  R   +++ + D D+ED
Sbjct: 61  KKSSNRPSAASS------AAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDDDNED 120

Query: 121 GMR-VPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           G   +PPHEFLA+TRMASFSVHEG+GRTLKGRDLSRVRNAI+EK GFQD
Sbjct: 121 GGDWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of MS005072 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-30
Identity = 83/167 (49.70%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 2   ATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARISK 61
           AT KS Y R ++RFLP     ++   DS FE  ESD+Y++ S  SPE RR +      ++
Sbjct: 4   ATRKSYYQRPSHRFLPTDRT-YNVTGDSEFEFDESDLYSNRSD-SPEFRRKLITS---NR 63

Query: 62  KPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDG 121
           K SP     +          ASSLP+N+ +WSKIL +E R        +  E D D  +G
Sbjct: 64  KSSPATVTTT--------TVASSLPMNVQNWSKILGKENR--------KSIENDDDGGEG 123

Query: 122 MRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
            ++PPHE+LA+TRMASFSVHEGIGRTLKGRD+SRVRNAI EKTGF D
Sbjct: 124 -KLPPHEYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of MS005072 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-29
Identity = 76/150 (50.67%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 26  ASDSSFELSESDIYNSASSKSP---EMRRSVAPGARISKKPSPKRSVESGDWGGARGGGA 85
           + ++ FE  ESDI+N    + P   + +RS++  +R+ +KP+     ++GD G       
Sbjct: 23  SDENVFEFDESDIHNLGDHQLPNSFDAKRSISI-SRLRRKPT-----KTGDSGNREITKT 82

Query: 86  SSLPVNIPDWSKILKEEYREKS--RWEYDEDSEGDGDSEDGMR--VPPHEFLARTRMASF 145
            SLPVNIPDWSKILK EYR  +    + D+D E D DS DG R  +PPHE+LAR R +SF
Sbjct: 83  GSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSNDGGRRMIPPHEYLARRRGSSF 142

Query: 146 SVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           +VHEGIG T KGRDL R+RNAIWEK GFQD
Sbjct: 143 TVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of MS005072 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-27
Identity = 77/170 (45.29%), Postives = 96/170 (56.47%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPGGHLHHSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARIS 60
           MAT K  Y R ++RF           + S FEL E D++N+ S  S     S +     S
Sbjct: 1   MATSKCYYPRPSHRFFT---TDQHVTATSDFELDEWDLFNTGSDSSSSF--SFSDLTITS 60

Query: 61  KKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDG--DS 120
            +    R +     G   G  ASSLPVN+PDWSKIL +E R + +   +E+ +GD     
Sbjct: 61  GRTGTNRQIHG---GSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVDGDEILCG 120

Query: 121 EDGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 169
           E   RVPPHE LA  RMASFSVHEG GRTLKGRDLSRVRN I++  G +D
Sbjct: 121 EGTRRVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of MS005072 vs. TAIR 10
Match: AT1G11700.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-20
Identity = 78/205 (38.05%), Postives = 102/205 (49.76%), Query Frame = 0


Query: 1   MATGKSCYGRSNYRFLPG----GHLHHSFASDSSFELSESDIYNSASSKSPEM------- 60
           MA G+      + R+L      G  + + A+D S EL+E DI++ A   SPEM       
Sbjct: 1   MARGRKLTMSQSERYLGSSYSYGDSNGNSATDES-ELTEEDIWSHAVDHSPEMLESHGAW 60

Query: 61  --RRSVAPGARI-----------SKKPSPKRSVESGDWGGARGGG--------ASSLPVN 120
             R +V    R+           S  P     +  G  GG  GGG        ASS PVN
Sbjct: 61  NTRDAVVRNGRVGGGLSLAFEDASSSPRIVHQIRGGGEGGGGGGGGGRVERQLASSAPVN 120

Query: 121 IPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLARTRM-------ASFSVH 167
           +PDWSKI +    E S  E DE+ E D     GM +PPHE+LA+++           SV 
Sbjct: 121 VPDWSKIYRVNSVE-SIHESDEEEEED----SGMMMPPHEYLAKSQQRRSRKSGGGGSVF 180

The following BLAST results are available for this feature:

BLAST of MS005072 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140623.1	4.8e-90	100.00	uncharacterized protein LOC111011233 [Momordica charantia]	[more]
XP_038901889.1	1.6e-56	74.43	uncharacterized protein LOC120088567 [Benincasa hispida]	[more]
XP_022985841.1	1.1e-54	71.01	uncharacterized protein LOC111483768 [Cucurbita maxima]	[more]
KAG7010627.1	1.5e-54	71.01	hypothetical protein SDJN02_27421, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023513244.1	3.3e-54	71.01	uncharacterized protein LOC111777757 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS005072 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS005072 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIE6	2.3e-90	100.00	uncharacterized protein LOC111011233 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1J9C1	5.4e-55	71.01	uncharacterized protein LOC111483768 OS=Cucurbita maxima OX=3661 GN=LOC111483768...	[more]
A0A6J1FVG2	1.6e-54	70.41	uncharacterized protein LOC111448807 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1KAF0	2.7e-54	72.57	uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571...	[more]
A0A5A7SXR0	4.3e-52	68.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS005072 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60680.1	1.8e-42	55.62	Protein of unknown function, DUF584	[more]
AT3G45210.1	2.1e-30	49.70	Protein of unknown function, DUF584	[more]
AT5G03230.1	1.0e-29	50.67	Protein of unknown function, DUF584	[more]
AT2G28400.1	2.1e-27	45.29	Protein of unknown function, DUF584	[more]
AT1G11700.1	1.9e-20	38.05	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 40..168 e-value: 1.0E-39 score: 137.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..124
None	No IPR available	PANTHER	PTHR46525	EMB\|CAB72159.1	coord: 1..168
None	No IPR available	PANTHER	PTHR46525:SF2	EMB\|CAB72159.1	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005072.1	MS005072.1	mRNA