MS005045 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTATCTGATGCTAAAGAAATTGGTCCTGATGCACTAGCTGATTCACATGGTAATATGACAATTGGTGGGATAATGGACTAATGGAGCATGAGTTGGCTGGAGTCCATTCTGGTGATTCTGACTGTTCCCTTCCA TTATCTGATGCTAAAGAAATTGGTCCTGATGCACTAGCTGATTCACATGGTAATATGACAATTGGTGGGATAATGGACATGGAGCATGAGTTGGCTGGAGTCCATTCTGGTGATTCTGACTGTTCCCTTCCA TTATCTGATGCTAAAGAAATTGGTCCTGATGCACTAGCTGATTCACATGGTAATATGACAATTGGTGGGATAATGGACATGGAGCATGAGTTGGCTGGAGTCCATTCTGGTGATTCTGACTGTTCCCTTCCA LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP Homology
BLAST of MS005045 vs. NCBI nr
Match: KAG6607722.1 (Carbamoyl-phosphate synthase large chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. NCBI nr
Match: XP_022940780.1 (carbamoyl-phosphate synthase large chain, chloroplastic-like [Cucurbita moschata] >XP_022940781.1 carbamoyl-phosphate synthase large chain, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. NCBI nr
Match: XP_038899248.1 (carbamoyl-phosphate synthase large chain, chloroplastic [Benincasa hispida]) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. NCBI nr
Match: KAG7037297.1 (Carbamoyl-phosphate synthase large chain, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. NCBI nr
Match: XP_008447795.1 (PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic [Cucumis melo]) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. ExPASy Swiss-Prot
Match: B9EXM2 (Carbamoyl-phosphate synthase large chain, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CARB PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.4e-07 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of MS005045 vs. ExPASy Swiss-Prot
Match: Q42601 (Carbamoyl-phosphate synthase large chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CARB PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.1e-07 Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of MS005045 vs. ExPASy Swiss-Prot
Match: P58942 (Carbamoyl-phosphate synthase large chain OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=carB PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.5e-06 Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of MS005045 vs. ExPASy Swiss-Prot
Match: P58943 (Carbamoyl-phosphate synthase large chain OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=carB PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.5e-06 Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of MS005045 vs. ExPASy Swiss-Prot
Match: Q8YQL2 (Carbamoyl-phosphate synthase large chain OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=carB PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.7e-05 Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of MS005045 vs. ExPASy TrEMBL
Match: A0A6J1FJE6 (Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Cucurbita moschata OX=3662 GN=LOC111446274 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. ExPASy TrEMBL
Match: A0A6J1IZ99 (Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Cucurbita maxima OX=3661 GN=LOC111480508 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. ExPASy TrEMBL
Match: A0A5D3DID8 (Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002620 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. ExPASy TrEMBL
Match: A0A0A0K592 (Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Cucumis sativus OX=3659 GN=Csa_7G189190 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. ExPASy TrEMBL
Match: A0A6J1CFG0 (Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Momordica charantia OX=3673 GN=LOC111010317 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.8e-08 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS005045 vs. TAIR 10
Match: AT1G29900.1 (carbamoyl phosphate synthetase B ) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-08 Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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