MS004995 (gene) Bitter gourd (TR) v1

Overview


Name	MS004995
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger protein ZAT3
Location	scaffold176: 1969516 .. 1970211 (-)
RNA-Seq Expression	MS004995
Synteny	MS004995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAAGCCGAAGTACGGGAAGAAGCCGGACCCGAGCGCGCCGAAGATTACTCGGCCCTGTAGTGAGTGCGGGAAGAAATTCTGGTCGTGGAAGGCTCTGTTCGGCCACATGCGGTGCCATCCGGAGCGTCAATGGCGAGGAATCAATCCGCCGCCGAATCTCCGGCGATCGTCGGAAACGGCGACGGCGACGGCGACGGAGGAAGATCACGAAATCGCGGCGTGTTTGATCATGCTCGCCAATGGCCCCAATGCGATCGATCGAACAACCGAAGCGGTTACCGAAACTGACCAGGAATCCGAACCGGCAGTGGCCGCGTTGAGCCGGTTCATGGAGCGGACCGGTCCGACATTTAGCCGGTTCGAGTGCTCGAGATGCAAAAAATCGTTCGGGTCGCATCAGGCCCTAGGAGGACACAGAGCGAGCCACAAGAACGTGAAGGGATGCTTCGCCGGCGGGAGGACGGACGGCGGCGAGTTTTCCGACGCCGTCGAAGAGAACGGGGAAACGGCGAACGAGTGCAGAGTTTGTATGAAGGTGATGAAGAGGCGGCATTGGGAGAAAGAAGATGAAGAACAGCAAAATTCTTCGGTGGGGAAGGATTATTTGGACTTGAATCTGCCTCCTCCAATGGAAGACGTTGAAGAAACCTCCTCCTATTTTTCAGGGATTGTTTTGGATCTGAGATTGNAAGAA

mRNA sequence

GCGAAGCCGAAGTACGGGAAGAAGCCGGACCCGAGCGCGCCGAAGATTACTCGGCCCTGTAGTGAGTGCGGGAAGAAATTCTGGTCGTGGAAGGCTCTGTTCGGCCACATGCGGTGCCATCCGGAGCGTCAATGGCGAGGAATCAATCCGCCGCCGAATCTCCGGCGATCGTCGGAAACGGCGACGGCGACGGCGACGGAGGAAGATCACGAAATCGCGGCGTGTTTGATCATGCTCGCCAATGGCCCCAATGCGATCGATCGAACAACCGAAGCGGTTACCGAAACTGACCAGGAATCCGAACCGGCAGTGGCCGCGTTGAGCCGGTTCATGGAGCGGACCGGTCCGACATTTAGCCGGTTCGAGTGCTCGAGATGCAAAAAATCGTTCGGGTCGCATCAGGCCCTAGGAGGACACAGAGCGAGCCACAAGAACGTGAAGGGATGCTTCGCCGGCGGGAGGACGGACGGCGGCGAGTTTTCCGACGCCGTCGAAGAGAACGGGGAAACGGCGAACGAGTGCAGAGTTTGTATGAAGGTGATGAAGAGGCGGCATTGGGAGAAAGAAGATGAAGAACAGCAAAATTCTTCGGTGGGGAAGGATTATTTGGACTTGAATCTGCCTCCTCCAATGGAAGACGTTGAAGAAACCTCCTCCTATTTTTCAGGGATTGTTTTGGATCTGAGATTGNAAGAA

Coding sequence (CDS)

GCGAAGCCGAAGTACGGGAAGAAGCCGGACCCGAGCGCGCCGAAGATTACTCGGCCCTGTAGTGAGTGCGGGAAGAAATTCTGGTCGTGGAAGGCTCTGTTCGGCCACATGCGGTGCCATCCGGAGCGTCAATGGCGAGGAATCAATCCGCCGCCGAATCTCCGGCGATCGTCGGAAACGGCGACGGCGACGGCGACGGAGGAAGATCACGAAATCGCGGCGTGTTTGATCATGCTCGCCAATGGCCCCAATGCGATCGATCGAACAACCGAAGCGGTTACCGAAACTGACCAGGAATCCGAACCGGCAGTGGCCGCGTTGAGCCGGTTCATGGAGCGGACCGGTCCGACATTTAGCCGGTTCGAGTGCTCGAGATGCAAAAAATCGTTCGGGTCGCATCAGGCCCTAGGAGGACACAGAGCGAGCCACAAGAACGTGAAGGGATGCTTCGCCGGCGGGAGGACGGACGGCGGCGAGTTTTCCGACGCCGTCGAAGAGAACGGGGAAACGGCGAACGAGTGCAGAGTTTGTATGAAGGTGATGAAGAGGCGGCATTGGGAGAAAGAAGATGAAGAACAGCAAAATTCTTCGGTGGGGAAGGATTATTTGGACTTGAATCTGCCTCCTCCAATGGAAGACGTTGAAGAAACCTCCTCCTATTTTTCAGGGATTGTTTTGGATCTGAGATTGNAAGAA

Protein sequence

AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERTGPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKVMKRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYFSGIVLDLRLXE

Homology

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BLAST of MS004995 vs. NCBI nr
Match: XP_022140530.1 (zinc finger protein ZAT3 [Momordica charantia])

HSP 1 Score: 464.5 bits (1194), Expect = 5.2e-127
Identity = 226/230 (98.26%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSET 60
           AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSE 
Sbjct: 60  AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSE- 119

Query: 61  ATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERTGPTFSR 120
            TATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAV ALSRFMERTGP FSR
Sbjct: 120 -TATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVDALSRFMERTGPPFSR 179

Query: 121 FECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKV 180
           FECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKV
Sbjct: 180 FECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKV 239

Query: 181 MKRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYFSGIVLDLRL 231
           MKRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYFSGIVLDLRL
Sbjct: 240 MKRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYFSGIVLDLRL 287

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BLAST of MS004995 vs. NCBI nr
Match: XP_042982142.1 (zinc finger protein ZAT3-like [Carya illinoinensis])

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-62
Identity = 138/265 (52.08%), Postives = 168/265 (63.40%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR---- 60
           +KPK+ KKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR    
Sbjct: 47  SKPKHSKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRPVSL 106

Query: 61  --SSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERT 120
             SS       T+EDHE+AACL+M+ANG N  +  +++V ++     P    L R     
Sbjct: 107 PLSSFDGLVMMTQEDHEVAACLLMMANGGNENEGKSKSVADSYHRGIPDSECLFREEAAE 166

Query: 121 GPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFS--------DAVEE 180
             +F RFECS CKK FGSHQALGGHRASHKNVKGCFA  R+DG +          D+VE+
Sbjct: 167 EASF-RFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSDGDQVEDHSGADERDSVED 226

Query: 181 NG----ETANECRVCMKVM---------KRRHWEKEDEEQQNSSVGKD--------YLDL 231
                  + ++C +C++V          KR HWEKED+    S  G           LDL
Sbjct: 227 KVLMVLGSGHKCSICLRVFSSGQALGGHKRCHWEKEDDPLMLSQQGLSPCGTKEGFGLDL 286

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BLAST of MS004995 vs. NCBI nr
Match: QGH83508.1 (zinc finger transcription factor [Diospyros kaki])

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-62
Identity = 144/270 (53.33%), Postives = 171/270 (63.33%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSET 60
           AK K GKKPDP APKITRPCSECGK FWSWKALFGHMRCHPERQWRGINPPPN RR S T
Sbjct: 78  AKSKSGKKPDPDAPKITRPCSECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRPSPT 137

Query: 61  ATATA---TEEDHEIAACLIMLANGPNAIDRTTEAVTETDQ---ESEPAV--------AA 120
           A A A   T+EDH++AACL+MLAN P A+D    A T TD+   ES   +          
Sbjct: 138 ANAEAGMTTDEDHDVAACLLMLANAPRALDSLDRATTSTDRGPLESGTTIRDAVTDGCGG 197

Query: 121 LSRFMERTGPTFS--RFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAV 180
                + TGP+ +  RFECS CK+ FGSHQALGGHRASHKNVKGCFA  R+D  E     
Sbjct: 198 GGAEADATGPSGASFRFECSSCKRVFGSHQALGGHRASHKNVKGCFASARSDSEEIDHRG 257

Query: 181 EENGE-----TANECRVCMKVM---------KRRHWEKEDEEQQ-------NSSVGKDYL 231
           EE+ E       ++C +C ++          KRRHWEK  +++Q        +S     L
Sbjct: 258 EEDEEKMMMVLGHKCSICWRIFSSGQALGGHKRRHWEKCGDDRQPPPAAACATSRQSCGL 317

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BLAST of MS004995 vs. NCBI nr
Match: XP_041012544.1 (zinc finger protein ZAT3-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 248.4 bits (633), Expect = 5.9e-62
Identity = 137/265 (51.70%), Postives = 168/265 (63.40%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR---- 60
           +KPKY KKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR    
Sbjct: 47  SKPKYAKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRPVAL 106

Query: 61  --SSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERT 120
             SS       ++EDHE+AACL+M+ANG N  +  +++V ++  +  P    L R     
Sbjct: 107 ALSSFDGLVMMSQEDHEVAACLLMMANGGNENEGKSKSVADSYHQEIPDSEGLFREEAAE 166

Query: 121 GPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFS--------DAVEE 180
             +F RFECS CKK FGSHQALGGHRASHKNVKGCFA  R+DG +          D+VE+
Sbjct: 167 EASF-RFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSDGDQVEDPSGADERDSVED 226

Query: 181 NG----ETANECRVCMKVM---------KRRHWEKEDEEQQNSSVGKD--------YLDL 231
                  + ++C +C++V          KR HWEK D+    S  G           LDL
Sbjct: 227 KVLMVLGSGHKCSICLRVFSSGQALGGHKRCHWEKGDDPSMLSQQGLSPCGTKEGFGLDL 286

[Close]

BLAST of MS004995 vs. NCBI nr
Match: XP_018829109.1 (zinc finger protein ZAT3-like [Juglans regia] >KAF5449099.1 hypothetical protein F2P56_029579 [Juglans regia])

HSP 1 Score: 248.1 bits (632), Expect = 7.7e-62
Identity = 136/265 (51.32%), Postives = 169/265 (63.77%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR---- 60
           +KPK+ KKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR    
Sbjct: 47  SKPKHAKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRPVAL 106

Query: 61  --SSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERT 120
             SS       ++EDHE+AACL+M+ANG N  +  +++V ++  +  P    L R     
Sbjct: 107 ALSSFDGLVMMSQEDHEVAACLLMMANGGNENEGKSKSVADSYHQEIPDSEGLFREEAAE 166

Query: 121 GPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFS--------DAVEE 180
             +F RFECS CKK FGSHQALGGHRASHKNVKGCFA  R+DG +          D+VE+
Sbjct: 167 EASF-RFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSDGDQVEDHSGADERDSVED 226

Query: 181 NG----ETANECRVCMKVM---------KRRHWEKEDEEQQNSSVGKDY--------LDL 231
                  + ++C +C++V          KR HWEK D+    S  G  +        LDL
Sbjct: 227 KVLMVLGSGHKCSICLRVFSSGQALGGHKRCHWEKGDDPSMLSHQGLSHCGTKEGFGLDL 286

[Close]

BLAST of MS004995 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.7e-52
Identity = 119/259 (45.95%), Postives = 149/259 (57.53%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSET 60
           +KPKY KKPDP+APKITRPC+ECG+KFWSWKALFGHMRCHPERQWRGINPPPN R  +  
Sbjct: 60  SKPKYTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAA 119

Query: 61  AT-----------ATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSR 120
           ++           +  +EEDHE+A+CL+ML+NG                           
Sbjct: 120 SSKQLNQILPNWVSFMSEEDHEVASCLLMLSNG--------------------------- 179

Query: 121 FMERTGPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFA-GGRTDGG---EFSDAVE 180
               +  +  RFEC  CKK FGSHQALGGHRASHKNVKGCFA    TD       S   +
Sbjct: 180 --TPSSSSIERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHD 239

Query: 181 ENGETA-----NECRVCMKVMK---------RRHWEKEDEEQQNSSVGKDYLDLNLPPPM 231
             G+       ++C +C +V           R HWEKE+E   + +     LDLN+PP +
Sbjct: 240 HQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPMISGA-----LDLNVPPTI 282

[Close]

BLAST of MS004995 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 105/258 (40.70%), Postives = 136/258 (52.71%), Query Frame = 0


Query: 2   KPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR----- 61
           +PK   +PDP A +I RPC+ECGK+F S KALFGHMRCHPERQWRGINPP N +R     
Sbjct: 49  RPKPVTQPDPDASQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSN 108

Query: 62  -SSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERTG 121
            +S +++   +EE+H IA+CL+M+ANG        +  T + +  E              
Sbjct: 109 AASSSSSWDPSEEEHNIASCLLMMANG--------DVPTRSSEVEE-------------- 168

Query: 122 PTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGG-------EFSDAVEENG 181
               RFEC  CKK FGSHQALGGHRA+HK+VKGCFA              E  D  ++ G
Sbjct: 169 ----RFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVD--QDKG 228

Query: 182 ETA-------NECRVCMKVMK---------RRHWEKEDEEQQNSSVGKDYLDLNLPPPME 231
           ++        + C +C +V           R HWEK+ EE Q   +     DLN+P    
Sbjct: 229 KSVKLVSGMNHRCNICSRVFSSGQALGGHMRCHWEKDQEENQVRGI-----DLNVP---- 268

[Close]

BLAST of MS004995 vs. ExPASy Swiss-Prot
Match: Q9SHD0 (Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 62/185 (33.51%), Postives = 85/185 (45.95%), Query Frame = 0


Query: 60  TATATATEEDHEIAACLIMLANG---PNAIDRTTEAVTETDQESEPAVAALSRFMERTGP 119
           +A+ T TEED  +A CLIML+          +      ETD +SE   ++ SR       
Sbjct: 141 SASDTTTEED--LAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSR------- 200

Query: 120 TFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRV 179
              RF+C  C K F S+QALGGHRASHK  K C         E+   V+E  +  +EC +
Sbjct: 201 --GRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKE--KKVHECPI 260

Query: 180 CMKVM---------KRRHWEKED-----------EEQQNSSVGKDYLDLNLPPPMEDVEE 222
           C +V          KR H                + ++  SV +  +DLNLP P E+ +E
Sbjct: 261 CFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEE-DE 311

[Close]

BLAST of MS004995 vs. ExPASy Swiss-Prot
Match: Q9M202 (Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 60/189 (31.75%), Postives = 92/189 (48.68%), Query Frame = 0


Query: 47  GINPPPNLRRSSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVT---ETDQESEPA 106
           G  P  +      +A+ T TEED  +A CL+ML+      +++ + V    ET++ESE  
Sbjct: 104 GYKPESDQEPPHSSASDTTTEED--LAFCLMMLSRDKWKKNKSNKEVVEEIETEEESE-- 163

Query: 107 VAALSRFMERTGPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFS-- 166
               ++    T  T  R++C  C K F S+QALGGHRASHK  K   +  +T+    +  
Sbjct: 164 --GYNKINRAT--TKGRYKCETCGKVFKSYQALGGHRASHK--KNRVSNNKTEQRSETEY 223

Query: 167 DAVEENGETANECRVCMKVM---------KRRHW------EKEDEEQQNSSVGKDYLDLN 216
           D V    +  +EC +C++V          KR H        ++    +N SV +  +DLN
Sbjct: 224 DNVVVVAKRIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQRMIDLN 282

[Close]

BLAST of MS004995 vs. ExPASy Swiss-Prot
Match: Q39092 (Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 55/173 (31.79%), Postives = 81/173 (46.82%), Query Frame = 0


Query: 58  SETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERTGPT 117
           S  + A  TEED  +A  L++L+      D+  +   E+D+E         R+ ++    
Sbjct: 116 SSVSDAATTEED--VALSLMLLSR-----DKWEKEEEESDEE---------RWKKKRN-- 175

Query: 118 FSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVC 177
              FEC  C+K F S+QALGGHRASHK  K      +    E     +++  + +EC +C
Sbjct: 176 -KWFECETCEKVFKSYQALGGHRASHK--KKIAETDQLGSDELKKKKKKSTSSHHECPIC 235

Query: 178 MKVM---------KRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYF 222
            KV          KR H    +E  + S +    +DLNLP P E+ E  SS F
Sbjct: 236 AKVFTSGQALGGHKRSHASANNEFTRRSGIIISLIDLNLPAPSEEEEMASSVF 267

[Close]

BLAST of MS004995 vs. ExPASy TrEMBL
Match: A0A6J1CFB7 (zinc finger protein ZAT3 OS=Momordica charantia OX=3673 GN=LOC111011168 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.5e-127
Identity = 226/230 (98.26%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSET 60
           AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSE 
Sbjct: 60  AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSE- 119

Query: 61  ATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERTGPTFSR 120
            TATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAV ALSRFMERTGP FSR
Sbjct: 120 -TATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVDALSRFMERTGPPFSR 179

Query: 121 FECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKV 180
           FECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKV
Sbjct: 180 FECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKV 239

Query: 181 MKRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYFSGIVLDLRL 231
           MKRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYFSGIVLDLRL
Sbjct: 240 MKRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYFSGIVLDLRL 287

[Close]

BLAST of MS004995 vs. ExPASy TrEMBL
Match: A0A5Q2WVU3 (Zinc finger transcription factor OS=Diospyros kaki OX=35925 GN=ZF1 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.7e-62
Identity = 144/270 (53.33%), Postives = 171/270 (63.33%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSET 60
           AK K GKKPDP APKITRPCSECGK FWSWKALFGHMRCHPERQWRGINPPPN RR S T
Sbjct: 78  AKSKSGKKPDPDAPKITRPCSECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRPSPT 137

Query: 61  ATATA---TEEDHEIAACLIMLANGPNAIDRTTEAVTETDQ---ESEPAV--------AA 120
           A A A   T+EDH++AACL+MLAN P A+D    A T TD+   ES   +          
Sbjct: 138 ANAEAGMTTDEDHDVAACLLMLANAPRALDSLDRATTSTDRGPLESGTTIRDAVTDGCGG 197

Query: 121 LSRFMERTGPTFS--RFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAV 180
                + TGP+ +  RFECS CK+ FGSHQALGGHRASHKNVKGCFA  R+D  E     
Sbjct: 198 GGAEADATGPSGASFRFECSSCKRVFGSHQALGGHRASHKNVKGCFASARSDSEEIDHRG 257

Query: 181 EENGE-----TANECRVCMKVM---------KRRHWEKEDEEQQ-------NSSVGKDYL 231
           EE+ E       ++C +C ++          KRRHWEK  +++Q        +S     L
Sbjct: 258 EEDEEKMMMVLGHKCSICWRIFSSGQALGGHKRRHWEKCGDDRQPPPAAACATSRQSCGL 317

[Close]

BLAST of MS004995 vs. ExPASy TrEMBL
Match: A0A2I4FBT1 (zinc finger protein ZAT3-like OS=Juglans regia OX=51240 GN=LOC108997351 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.7e-62
Identity = 136/265 (51.32%), Postives = 169/265 (63.77%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR---- 60
           +KPK+ KKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR    
Sbjct: 47  SKPKHAKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRPVAL 106

Query: 61  --SSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERT 120
             SS       ++EDHE+AACL+M+ANG N  +  +++V ++  +  P    L R     
Sbjct: 107 ALSSFDGLVMMSQEDHEVAACLLMMANGGNENEGKSKSVADSYHQEIPDSEGLFREEAAE 166

Query: 121 GPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFS--------DAVEE 180
             +F RFECS CKK FGSHQALGGHRASHKNVKGCFA  R+DG +          D+VE+
Sbjct: 167 EASF-RFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSDGDQVEDHSGADERDSVED 226

Query: 181 NG----ETANECRVCMKVM---------KRRHWEKEDEEQQNSSVGKDY--------LDL 231
                  + ++C +C++V          KR HWEK D+    S  G  +        LDL
Sbjct: 227 KVLMVLGSGHKCSICLRVFSSGQALGGHKRCHWEKGDDPSMLSHQGLSHCGTKEGFGLDL 286

[Close]

BLAST of MS004995 vs. ExPASy TrEMBL
Match: A0A7J7H281 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017298 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.4e-61
Identity = 146/283 (51.59%), Postives = 165/283 (58.30%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSE- 60
           AKPK GKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPN RR +  
Sbjct: 62  AKPKCGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPTSP 121

Query: 61  --TATATATEEDHEIAACLIMLANGPNAIDRTTEA-VTETDQESEPAVAALSRFMERTG- 120
             +  A  T EDHE+AACL+MLAN P A +    A  T T  ES+  V    +     G 
Sbjct: 122 EISGDARMTPEDHEVAACLLMLANSPTAFETQCAATTTATMLESDTVVVRDDKAAASGGG 181

Query: 121 ------PTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTD------------- 180
                     RFECS CKK FGSHQALGGHRASHKNVKGCFA  R+D             
Sbjct: 182 GDGDNLDVNCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSDGEEVVALDHERSS 241

Query: 181 ---GGEFSDAVEENG---------ETANECRVCMKVM---------KRRHWEKEDEEQQ- 231
              GGE    + ENG            ++C +C++V          KR HWEK DE    
Sbjct: 242 GGGGGEGEVVMRENGGEEEDKMVMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDEPSSQ 301

[Close]

BLAST of MS004995 vs. ExPASy TrEMBL
Match: A0A4S4E7C1 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_007308 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 7.0e-61
Identity = 145/282 (51.42%), Postives = 164/282 (58.16%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSE- 60
           AKPK GKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPN RR +  
Sbjct: 61  AKPKCGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPTSP 120

Query: 61  --TATATATEEDHEIAACLIMLANGPNAIDRTTEA-VTETDQESEPAVAALSRFMERTG- 120
             +  A  T EDHE+AACL+MLAN P A +    A  T T  ES+  V    +     G 
Sbjct: 121 EISGDARMTPEDHEVAACLLMLANSPTAFETQCAATTTATMLESDTVVVRDDKAAASGGG 180

Query: 121 ------PTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTD------------- 180
                     RFECS CKK FGSHQALGGHRASHKNVKGCFA  R+D             
Sbjct: 181 GDGDNLDVNCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSDGEEVVALDHERSS 240

Query: 181 ---GGEFSDAVEENG---------ETANECRVCMKVM---------KRRHWEKEDEEQQ- 230
              GGE    + ENG            ++C +C++V          KR HWEK DE    
Sbjct: 241 GGGGGEGEVVMRENGGEEEDKMVMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDEPSSQ 300

[Close]

BLAST of MS004995 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-53
Identity = 119/259 (45.95%), Postives = 149/259 (57.53%), Query Frame = 0


Query: 1   AKPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSET 60
           +KPKY KKPDP+APKITRPC+ECG+KFWSWKALFGHMRCHPERQWRGINPPPN R  +  
Sbjct: 60  SKPKYTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAA 119

Query: 61  AT-----------ATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSR 120
           ++           +  +EEDHE+A+CL+ML+NG                           
Sbjct: 120 SSKQLNQILPNWVSFMSEEDHEVASCLLMLSNG--------------------------- 179

Query: 121 FMERTGPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFA-GGRTDGG---EFSDAVE 180
               +  +  RFEC  CKK FGSHQALGGHRASHKNVKGCFA    TD       S   +
Sbjct: 180 --TPSSSSIERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHD 239

Query: 181 ENGETA-----NECRVCMKVMK---------RRHWEKEDEEQQNSSVGKDYLDLNLPPPM 231
             G+       ++C +C +V           R HWEKE+E   + +     LDLN+PP +
Sbjct: 240 HQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPMISGA-----LDLNVPPTI 282

[Close]

BLAST of MS004995 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein )

HSP 1 Score: 164.9 bits (416), Expect = 8.0e-41
Identity = 105/258 (40.70%), Postives = 136/258 (52.71%), Query Frame = 0


Query: 2   KPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRR----- 61
           +PK   +PDP A +I RPC+ECGK+F S KALFGHMRCHPERQWRGINPP N +R     
Sbjct: 49  RPKPVTQPDPDASQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSN 108

Query: 62  -SSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERTG 121
            +S +++   +EE+H IA+CL+M+ANG        +  T + +  E              
Sbjct: 109 AASSSSSWDPSEEEHNIASCLLMMANG--------DVPTRSSEVEE-------------- 168

Query: 122 PTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGG-------EFSDAVEENG 181
               RFEC  CKK FGSHQALGGHRA+HK+VKGCFA              E  D  ++ G
Sbjct: 169 ----RFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVD--QDKG 228

Query: 182 ETA-------NECRVCMKVMK---------RRHWEKEDEEQQNSSVGKDYLDLNLPPPME 231
           ++        + C +C +V           R HWEK+ EE Q   +     DLN+P    
Sbjct: 229 KSVKLVSGMNHRCNICSRVFSSGQALGGHMRCHWEKDQEENQVRGI-----DLNVP---- 268

[Close]

BLAST of MS004995 vs. TAIR 10
Match: AT2G45120.1 (C2H2-like zinc finger protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11
Identity = 62/185 (33.51%), Postives = 85/185 (45.95%), Query Frame = 0


Query: 60  TATATATEEDHEIAACLIMLANG---PNAIDRTTEAVTETDQESEPAVAALSRFMERTGP 119
           +A+ T TEED  +A CLIML+          +      ETD +SE   ++ SR       
Sbjct: 141 SASDTTTEED--LAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSR------- 200

Query: 120 TFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRV 179
              RF+C  C K F S+QALGGHRASHK  K C         E+   V+E  +  +EC +
Sbjct: 201 --GRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKE--KKVHECPI 260

Query: 180 CMKVM---------KRRHWEKED-----------EEQQNSSVGKDYLDLNLPPPMEDVEE 222
           C +V          KR H                + ++  SV +  +DLNLP P E+ +E
Sbjct: 261 CFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEE-DE 311

[Close]

BLAST of MS004995 vs. TAIR 10
Match: AT3G60580.1 (C2H2-like zinc finger protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11
Identity = 60/189 (31.75%), Postives = 92/189 (48.68%), Query Frame = 0


Query: 47  GINPPPNLRRSSETATATATEEDHEIAACLIMLANGPNAIDRTTEAVT---ETDQESEPA 106
           G  P  +      +A+ T TEED  +A CL+ML+      +++ + V    ET++ESE  
Sbjct: 104 GYKPESDQEPPHSSASDTTTEED--LAFCLMMLSRDKWKKNKSNKEVVEEIETEEESE-- 163

Query: 107 VAALSRFMERTGPTFSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFS-- 166
               ++    T  T  R++C  C K F S+QALGGHRASHK  K   +  +T+    +  
Sbjct: 164 --GYNKINRAT--TKGRYKCETCGKVFKSYQALGGHRASHK--KNRVSNNKTEQRSETEY 223

Query: 167 DAVEENGETANECRVCMKVM---------KRRHW------EKEDEEQQNSSVGKDYLDLN 216
           D V    +  +EC +C++V          KR H        ++    +N SV +  +DLN
Sbjct: 224 DNVVVVAKRIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQRMIDLN 282

[Close]

BLAST of MS004995 vs. TAIR 10
Match: AT1G02030.1 (C2H2-like zinc finger protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 55/173 (31.79%), Postives = 81/173 (46.82%), Query Frame = 0


Query: 58  SETATATATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVAALSRFMERTGPT 117
           S  + A  TEED  +A  L++L+      D+  +   E+D+E         R+ ++    
Sbjct: 116 SSVSDAATTEED--VALSLMLLSR-----DKWEKEEEESDEE---------RWKKKRN-- 175

Query: 118 FSRFECSRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVC 177
              FEC  C+K F S+QALGGHRASHK  K      +    E     +++  + +EC +C
Sbjct: 176 -KWFECETCEKVFKSYQALGGHRASHK--KKIAETDQLGSDELKKKKKKSTSSHHECPIC 235

Query: 178 MKVM---------KRRHWEKEDEEQQNSSVGKDYLDLNLPPPMEDVEETSSYF 222
            KV          KR H    +E  + S +    +DLNLP P E+ E  SS F
Sbjct: 236 AKVFTSGQALGGHKRSHASANNEFTRRSGIIISLIDLNLPAPSEEEEMASSVF 267

The following BLAST results are available for this feature:

BLAST of MS004995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140530.1	5.2e-127	98.26	zinc finger protein ZAT3 [Momordica charantia]	[more]
XP_042982142.1	3.4e-62	52.08	zinc finger protein ZAT3-like [Carya illinoinensis]	[more]
QGH83508.1	3.4e-62	53.33	zinc finger transcription factor [Diospyros kaki]	[more]
XP_041012544.1	5.9e-62	51.70	zinc finger protein ZAT3-like [Juglans microcarpa x Juglans regia]	[more]
XP_018829109.1	7.7e-62	51.32	zinc finger protein ZAT3-like [Juglans regia] >KAF5449099.1 hypothetical protein...	[more]

BLAST of MS004995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	5.7e-52	45.95	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
Q9SIJ0	1.1e-39	40.70	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]
Q9SHD0	2.4e-10	33.51	Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1	[more]
Q9M202	7.1e-10	31.75	Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1	[more]
Q39092	1.6e-09	31.79	Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1	[more]

BLAST of MS004995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFB7	2.5e-127	98.26	zinc finger protein ZAT3 OS=Momordica charantia OX=3673 GN=LOC111011168 PE=4 SV=...	[more]
A0A5Q2WVU3	1.7e-62	53.33	Zinc finger transcription factor OS=Diospyros kaki OX=35925 GN=ZF1 PE=2 SV=1	[more]
A0A2I4FBT1	3.7e-62	51.32	zinc finger protein ZAT3-like OS=Juglans regia OX=51240 GN=LOC108997351 PE=4 SV=...	[more]
A0A7J7H281	2.4e-61	51.59	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017298 PE=4 SV=1	[more]
A0A4S4E7C1	7.0e-61	51.42	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0073...	[more]

BLAST of MS004995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35280.1	4.1e-53	45.95	C2H2-like zinc finger protein	[more]
AT2G17180.1	8.0e-41	40.70	C2H2-like zinc finger protein	[more]
AT2G45120.1	1.7e-11	33.51	C2H2-like zinc finger protein	[more]
AT3G60580.1	5.0e-11	31.75	C2H2-like zinc finger protein	[more]
AT1G02030.1	1.1e-10	31.79	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 18..40 e-value: 0.018 score: 24.2 coord: 121..143 e-value: 0.32 score: 20.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 20..40
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 123..143
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 18..45 score: 9.660301
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 121..148 score: 10.553974
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 120..144 e-value: 3.3E-9 score: 36.5 coord: 19..42 e-value: 3.1E-7 score: 30.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..66
None	No IPR available	PANTHER	PTHR47591:SF1	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 2..230
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 2..230
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 19..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004995.1	MS004995.1	mRNA