MS004811 (gene) Bitter gourd (TR) v1

Overview
NameMS004811
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold176: 772346 .. 772477 (-)
RNA-Seq ExpressionMS004811
SyntenyMS004811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGGCTATGGAAGATTCATATTCGCACGTTTTGCTTTCCATTGCTCGCGTTTCGCTCACCGAGGATGGAAGAACTCCGCGGTTTCCGATTAATCTATTACGAAGTACGCTGCGAATATGTATACCT

mRNA sequence

ATGGAGATGGCTATGGAAGATTCATATTCGCACGTTTTGCTTTCCATTGCTCGCGTTTCGCTCACCGAGGATGGAAGAACTCCGCGGTTTCCGATTAATCTATTACGAAGTACGCTGCGAATATGTATACCT

Coding sequence (CDS)

ATGGAGATGGCTATGGAAGATTCATATTCGCACGTTTTGCTTTCCATTGCTCGCGTTTCGCTCACCGAGGATGGAAGAACTCCGCGGTTTCCGATTAATCTATTACGAAGTACGCTGCGAATATGTATACCT

Protein sequence

MEMAMEDSYSHVLLSIARVSLTEDGRTPRFPINLLRSTLRICIP
Homology
[Close]
BLAST of MS004811 vs. NCBI nr
Match: BBG99491.1 (hypothetical protein Prudu_009202, partial [Prunus dulcis])

HSP 1 Score: 53.9 bits (128), Expect = 4.0e-04
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 1  MEMAMEDSYSHVLLSIARVSLTEDGRTPRFPINLLRSTLRI 42
          MEMAMEDS SH LL +AR +L  DGRTPRF  N ++STLRI
Sbjct: 11 MEMAMEDSCSHSLLFMARYALQSDGRTPRFLKNPIQSTLRI 51

[Close]
BLAST of MS004811 vs. ExPASy TrEMBL
Match: A0A4Y1R5W2 (Uncharacterized protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_009202 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 1  MEMAMEDSYSHVLLSIARVSLTEDGRTPRFPINLLRSTLRI 42
          MEMAMEDS SH LL +AR +L  DGRTPRF  N ++STLRI
Sbjct: 11 MEMAMEDSCSHSLLFMARYALQSDGRTPRFLKNPIQSTLRI 51

The following BLAST results are available for this feature:
BLAST of MS004811 vs. NCBI nr
Match NameE-valueIdentityDescription
BBG99491.14.0e-0468.29hypothetical protein Prudu_009202, partial [Prunus dulcis][more]
BLAST of MS004811 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS004811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4Y1R5W22.0e-0468.29Uncharacterized protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_009202 PE=4... [more]
BLAST of MS004811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS004811.1MS004811.1mRNA