MS004704 (gene) Bitter gourd (TR) v1

Overview


Name	MS004704
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor MYB35
Location	scaffold741: 248413 .. 249436 (+)
RNA-Seq Expression	MS004704
Synteny	MS004704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAACCTCCTTGCTGTGATAAATCCAATGTCAAAAGAGGCCTTTGGACTGCAGAAGAAGATGCCAAAATCCTTGCTTATGTTTCCAACCATGGAGTTGGAAATTGGACTCTGGTTCCTAAAAAAGCAGGTCTCTTTCTCTCTTTTCTTTTCCTTCGGGTGGGAGATCAAACCATCGACCATTGGGATAGTAATAAATGTCTTATCCATTTAAGCTACGTTCGGGTTGGTTTCTTTTCTTTCTTCTTTTGTAATTCAGTAAGAAAGTTCAACCATTTTGGCCTTTTTTTTTCTCCTCAGGGCTGAATAGATGTGGGAAGAGTTGCAGGCTGAGATGGACTAATTACCTTAGGCCTGATCTCAGGCATGACAGCTTCACTCCTCAAGAAGAAGACCTCATTATCAAACTCCATCAAGCCATTGGAAGCAGGTCCTACTCCCTCCCCCTTTGCCCGTCGTCCTTTATTCTCGTGTTTCGTTAAACGTGTTTAGCTTACGAGTCGAGTTTGTACGAAGTATAGGCTTGTAGAGTCAAGTTTACATTGCCTAGTTACAAACTTTTTTCTGATTTGCTCTAACATAGGCTATACAGTTCCTTTCACAAATCATAAATCCAATGCGTCATCTCATCTTTCTACGTGTTGGCACGATATTTTAAAACTCTCGTAGATGTTCTTACTTTTATATTACTAATCTTTTCTATTTCTAGCCAATGTGAGACTATATTCTACCATTCCCAACGACTAAAAACCAAACACAGATTATACAAATCCGAGCTTCTCTATACAATCCAAACAGGAGCTATACAAATCTTTCCAATCCCAAGCCACACAAACATTTGATAAAATCATGAGCTAAACATCATCTTCTAATATTTGGCAATATGAAACAGAACTAGTTATTGAGTACCTGAAGATGAATGTCTCTCAGGTGGTCTCTGATAGCAAAGCAACTCCCAGGAAGAACAGACAATGATGTGAAGAATTACTGGAACACAAAGCTGAGGAAGAAGCTCTCGAAA

mRNA sequence

ATGGGAAAACCTCCTTGCTGTGATAAATCCAATGTCAAAAGAGGCCTTTGGACTGCAGAAGAAGATGCCAAAATCCTTGCTTATGTTTCCAACCATGGAGTTGGAAATTGGACTCTGGTTCCTAAAAAAGCAGGGCTGAATAGATGTGGGAAGAGTTGCAGGCTGAGATGGACTAATTACCTTAGGCCTGATCTCAGGCATGACAGCTTCACTCCTCAAGAAGAAGACCTCATTATCAAACTCCATCAAGCCATTGGAAGCAGGTGGTCTCTGATAGCAAAGCAACTCCCAGGAAGAACAGACAATGATGTGAAGAATTACTGGAACACAAAGCTGAGGAAGAAGCTCTCGAAA

Coding sequence (CDS)

ATGGGAAAACCTCCTTGCTGTGATAAATCCAATGTCAAAAGAGGCCTTTGGACTGCAGAAGAAGATGCCAAAATCCTTGCTTATGTTTCCAACCATGGAGTTGGAAATTGGACTCTGGTTCCTAAAAAAGCAGGGCTGAATAGATGTGGGAAGAGTTGCAGGCTGAGATGGACTAATTACCTTAGGCCTGATCTCAGGCATGACAGCTTCACTCCTCAAGAAGAAGACCTCATTATCAAACTCCATCAAGCCATTGGAAGCAGGTGGTCTCTGATAGCAAAGCAACTCCCAGGAAGAACAGACAATGATGTGAAGAATTACTGGAACACAAAGCTGAGGAAGAAGCTCTCGAAA

Protein sequence

MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK

Homology

[Close]

BLAST of MS004704 vs. NCBI nr
Match: XP_022157667.1 (transcription factor MYB35 [Momordica charantia])

HSP 1 Score: 258.5 bits (659), Expect = 2.9e-65
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 118

[Close]

BLAST of MS004704 vs. NCBI nr
Match: KAG6580990.1 (Transcription factor MYB35, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.3 bits (656), Expect = 6.4e-65
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKLSK
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLSK 118

[Close]

BLAST of MS004704 vs. NCBI nr
Match: XP_023526254.1 (transcription factor MYB35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 6.4e-65
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKLSK
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLSK 118

[Close]

BLAST of MS004704 vs. NCBI nr
Match: XP_022934424.1 (transcription factor MYB35-like [Cucurbita moschata] >XP_022983893.1 transcription factor MYB35-like [Cucurbita maxima])

HSP 1 Score: 257.3 bits (656), Expect = 6.4e-65
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKLSK
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLSK 118

[Close]

BLAST of MS004704 vs. NCBI nr
Match: XP_008443447.1 (PREDICTED: transcription factor MYB35 [Cucumis melo] >KAA0053721.1 transcription factor MYB35 [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 3.2e-64
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKL K
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLLK 118

[Close]

BLAST of MS004704 vs. ExPASy Swiss-Prot
Match: Q9LSI7 (Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.6e-58
Identity = 98/118 (83.05%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+PPCCDKSNVK+GLWT EEDAKILAYV+ HGVGNW+L+PKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDL+HDSF+ QEE+LII+ H+AIGSRWS IA++LPGRTDNDVKN+WNTKL+KKL K
Sbjct: 61  LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMK 118

[Close]

BLAST of MS004704 vs. ExPASy Swiss-Prot
Match: Q9XHV0 (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-49
Identity = 82/117 (70.09%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+ PCC+K NVKRG WT EED K+ +Y++ HG  NW L+PK AGL RCGKSCRLRWTNY
Sbjct: 1   MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLS 118
           LRPDL+H  F+  EE +I+K H  +G+RWSLIA QLPGRTDNDVKNYWNTKL+KKLS
Sbjct: 61  LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLS 117

[Close]

BLAST of MS004704 vs. ExPASy Swiss-Prot
Match: Q7XQN1 (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-49
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+ PCC+K NVKRG WT EED K+L+Y++ +G  NW L+PK AGL RCGKSCRLRWTNY
Sbjct: 1   MGRVPCCEKDNVKRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLS 118
           LRPDL+H  FT  EE  IIKLH  +G+RWS+IA QLPGRTDNDVKN+WNTKL+KKLS
Sbjct: 61  LRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLS 117

[Close]

BLAST of MS004704 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-44
Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGV-GNWTLVPKKAGLNRCGKSCRLRWTN 60
           MG+ PCCDK+NVK+G W+ EEDAK+ +Y+ N G  GNW  +P+K GL RCGKSCRLRW N
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKL 117
           YLRP+++H  F+ +EE++I  L+  IGSRWS+IA QLPGRTDND+KNYWNT+L+KKL
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL 117

[Close]

BLAST of MS004704 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-44
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+ PCCDK+ +K+G WT EED K+LAY+  HG G+W  +P+KAGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPD++   FT QEE  II+LH  +G+RWS IA  LP RTDN++KNYWNT L+K+L K
Sbjct: 61  LRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIK 118

[Close]

BLAST of MS004704 vs. ExPASy TrEMBL
Match: A0A6J1DV32 (transcription factor MYB35 OS=Momordica charantia OX=3673 GN=LOC111024322 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 118

[Close]

BLAST of MS004704 vs. ExPASy TrEMBL
Match: A0A6J1J901 (transcription factor MYB35-like OS=Cucurbita maxima OX=3661 GN=LOC111482372 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.1e-65
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKLSK
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLSK 118

[Close]

BLAST of MS004704 vs. ExPASy TrEMBL
Match: A0A6J1F2J0 (transcription factor MYB35-like OS=Cucurbita moschata OX=3662 GN=LOC111441605 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.1e-65
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKLSK
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLSK 118

[Close]

BLAST of MS004704 vs. ExPASy TrEMBL
Match: A0A5A7UJQ3 (Transcription factor MYB35 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00970 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-64
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKL K
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLLK 118

[Close]

BLAST of MS004704 vs. ExPASy TrEMBL
Match: A0A1S3B843 (transcription factor MYB35 OS=Cucumis melo OX=3656 GN=LOC103487038 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-64
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRTDNDVKNYWNTKLRKKL K
Sbjct: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSVIAKQLPGRTDNDVKNYWNTKLRKKLLK 118

[Close]

BLAST of MS004704 vs. TAIR 10
Match: AT3G28470.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 225.3 bits (573), Expect = 2.5e-59
Identity = 98/118 (83.05%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+PPCCDKSNVK+GLWT EEDAKILAYV+ HGVGNW+L+PKKAGLNRCGKSCRLRWTNY
Sbjct: 1   MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLSK 119
           LRPDL+HDSF+ QEE+LII+ H+AIGSRWS IA++LPGRTDNDVKN+WNTKL+KKL K
Sbjct: 61  LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMK 118

[Close]

BLAST of MS004704 vs. TAIR 10
Match: AT5G56110.1 (myb domain protein 103 )

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-50
Identity = 82/117 (70.09%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+ PCC+K NVKRG WT EED K+ +Y++ HG  NW L+PK AGL RCGKSCRLRWTNY
Sbjct: 1   MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKLS 118
           LRPDL+H  F+  EE +I+K H  +G+RWSLIA QLPGRTDNDVKNYWNTKL+KKLS
Sbjct: 61  LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLS 117

[Close]

BLAST of MS004704 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 180.6 bits (457), Expect = 7.1e-46
Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGV-GNWTLVPKKAGLNRCGKSCRLRWTN 60
           MG+ PCCDK+NVK+G W+ EEDAK+ +Y+ N G  GNW  +P+K GL RCGKSCRLRW N
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKL 117
           YLRP+++H  F+ +EE++I  L+  IGSRWS+IA QLPGRTDND+KNYWNT+L+KKL
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL 117

[Close]

BLAST of MS004704 vs. TAIR 10
Match: AT3G02940.1 (myb domain protein 107 )

HSP 1 Score: 178.3 bits (451), Expect = 3.5e-45
Identity = 72/116 (62.07%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+ PCCD+S +K+G WT EED K++ ++  HG G+W  +PK+AGLNRCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKL 117
           LRPD++  +FT +EE  II LH  +G++WS IA  LPGRTDN++KNYWNT +RKKL
Sbjct: 61  LRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIRKKL 116

[Close]

BLAST of MS004704 vs. TAIR 10
Match: AT4G28110.1 (myb domain protein 41 )

HSP 1 Score: 178.3 bits (451), Expect = 3.5e-45
Identity = 72/116 (62.07%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNY 60
           MG+ PCCDK+ VK+G WTAEED K++ Y+  HG GNW  +PK AGL+RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNTKLRKKL 117
           LRPD++   F+ +EE+ II+LH  +G++WS IA +LPGRTDN++KN+WNT +RK+L
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRL 116

The following BLAST results are available for this feature:

BLAST of MS004704 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157667.1	2.9e-65	100.00	transcription factor MYB35 [Momordica charantia]	[more]
KAG6580990.1	6.4e-65	99.15	Transcription factor MYB35, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023526254.1	6.4e-65	99.15	transcription factor MYB35-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934424.1	6.4e-65	99.15	transcription factor MYB35-like [Cucurbita moschata] >XP_022983893.1 transcripti...	[more]
XP_008443447.1	3.2e-64	98.31	PREDICTED: transcription factor MYB35 [Cucumis melo] >KAA0053721.1 transcription...	[more]

BLAST of MS004704 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSI7	3.6e-58	83.05	Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1	[more]
Q9XHV0	1.8e-49	70.09	Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1	[more]
Q7XQN1	1.8e-49	70.94	Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=...	[more]
Q9M2Y9	1.0e-44	64.10	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9LE63	1.7e-44	63.56	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]

BLAST of MS004704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DV32	1.4e-65	100.00	transcription factor MYB35 OS=Momordica charantia OX=3673 GN=LOC111024322 PE=4 S...	[more]
A0A6J1J901	3.1e-65	99.15	transcription factor MYB35-like OS=Cucurbita maxima OX=3661 GN=LOC111482372 PE=4...	[more]
A0A6J1F2J0	3.1e-65	99.15	transcription factor MYB35-like OS=Cucurbita moschata OX=3662 GN=LOC111441605 PE...	[more]
A0A5A7UJQ3	1.5e-64	98.31	Transcription factor MYB35 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3B843	1.5e-64	98.31	transcription factor MYB35 OS=Cucumis melo OX=3656 GN=LOC103487038 PE=4 SV=1	[more]

BLAST of MS004704 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28470.1	2.5e-59	83.05	Duplicated homeodomain-like superfamily protein	[more]
AT5G56110.1	1.3e-50	70.09	myb domain protein 103	[more]
AT3G49690.1	7.1e-46	64.10	myb domain protein 84	[more]
AT3G02940.1	3.5e-45	62.07	myb domain protein 107	[more]
AT4G28110.1	3.5e-45	62.07	myb domain protein 41	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..63 e-value: 1.7E-14 score: 64.1 coord: 66..114 e-value: 3.1E-14 score: 63.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 11.42801
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 9.97646
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..112 e-value: 1.10752E-10 score: 50.6518
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..61 e-value: 5.19753E-11 score: 51.8074
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 3.6E-16 score: 59.1 coord: 69..110 e-value: 1.8E-14 score: 53.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..65 score: 26.292887
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 66..116 score: 20.281534
None	No IPR available	GENE3D	1.10.10.60		coord: 6..67 e-value: 4.0E-20 score: 73.4
None	No IPR available	GENE3D	1.10.10.60		coord: 69..118 e-value: 2.3E-21 score: 77.6
None	No IPR available	PANTHER	PTHR47994	F14D16.11-RELATED	coord: 1..118
None	No IPR available	PANTHER	PTHR47994:SF5	F14D16.11-RELATED	coord: 1..118
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004704.1	MS004704.1	mRNA