MS004699 (gene) Bitter gourd (TR) v1

Overview
NameMS004699
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrovirus-related Pol polyprotein LINE-1
Locationscaffold741: 156040 .. 156657 (+)
RNA-Seq ExpressionMS004699
SyntenyMS004699
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTCTCACTTAATGTTTGCAGATGATCTATTACTCTTTGCGGAAGCTAATTTAGACCAAATTGAGGTTGTTAAGACAGTTCTAAGTAAATTTTGTGAGGCTTCAGTCCAAAAAGTAAACAACTTCAAGACAATTATCTATTTCTCAAAGAATGTCCCTCACGAGGAGCAACAACAGATTGTTGATGTTGGTGGATTTAGAGTTACTTCCAATGTAGGGAAATACTTAGGGATTCCAATTATACATGGTCGGCTTCCTGCCTCGGCTCTCAAAGAGATAATAAACAAAGTTAGTCTTTGTTTGAGTAGCTGGTCAGCTGCTTCTTTATCATTAGCAGGGCACATGACCCTTGTCCAACCTGTGCTTCAAGCTCTTCCAACTCACTCCATGCACATTTTTCGGTTCCCAGTTTTGGTGTGTAAAAAACTTGACCAACTGTGTAGAAACTTATTGTGGGGGCATACCTCTCAGAGGTCTAGAATCCATTTAATCAGTTGGAAATCAATTACTAAGCCTAAAGTTGAGGGGGATCTTGGTCTTCATAAATTTAAAGAGTTTAATACGGCTCTCTTAGGGATGATTGCCTGGGGTTTGATTAAAAAGCGAAGCGACCTTTGG

mRNA sequence

ATCTCTCACTTAATGTTTGCAGATGATCTATTACTCTTTGCGGAAGCTAATTTAGACCAAATTGAGGTTGTTAAGACAGTTCTAAGTAAATTTTGTGAGGCTTCAGTCCAAAAAGTAAACAACTTCAAGACAATTATCTATTTCTCAAAGAATGTCCCTCACGAGGAGCAACAACAGATTGTTGATGTTGGTGGATTTAGAGTTACTTCCAATGTAGGGAAATACTTAGGGATTCCAATTATACATGGTCGGCTTCCTGCCTCGGCTCTCAAAGAGATAATAAACAAAGTTAGTCTTTGTTTGAGTAGCTGGTCAGCTGCTTCTTTATCATTAGCAGGGCACATGACCCTTGTCCAACCTGTGCTTCAAGCTCTTCCAACTCACTCCATGCACATTTTTCGGTTCCCAGTTTTGGTGTGTAAAAAACTTGACCAACTGTGTAGAAACTTATTGTGGGGGCATACCTCTCAGAGGTCTAGAATCCATTTAATCAGTTGGAAATCAATTACTAAGCCTAAAGTTGAGGGGGATCTTGGTCTTCATAAATTTAAAGAGTTTAATACGGCTCTCTTAGGGATGATTGCCTGGGGTTTGATTAAAAAGCGAAGCGACCTTTGG

Coding sequence (CDS)

ATCTCTCACTTAATGTTTGCAGATGATCTATTACTCTTTGCGGAAGCTAATTTAGACCAAATTGAGGTTGTTAAGACAGTTCTAAGTAAATTTTGTGAGGCTTCAGTCCAAAAAGTAAACAACTTCAAGACAATTATCTATTTCTCAAAGAATGTCCCTCACGAGGAGCAACAACAGATTGTTGATGTTGGTGGATTTAGAGTTACTTCCAATGTAGGGAAATACTTAGGGATTCCAATTATACATGGTCGGCTTCCTGCCTCGGCTCTCAAAGAGATAATAAACAAAGTTAGTCTTTGTTTGAGTAGCTGGTCAGCTGCTTCTTTATCATTAGCAGGGCACATGACCCTTGTCCAACCTGTGCTTCAAGCTCTTCCAACTCACTCCATGCACATTTTTCGGTTCCCAGTTTTGGTGTGTAAAAAACTTGACCAACTGTGTAGAAACTTATTGTGGGGGCATACCTCTCAGAGGTCTAGAATCCATTTAATCAGTTGGAAATCAATTACTAAGCCTAAAGTTGAGGGGGATCTTGGTCTTCATAAATTTAAAGAGTTTAATACGGCTCTCTTAGGGATGATTGCCTGGGGTTTGATTAAAAAGCGAAGCGACCTTTGG

Protein sequence

ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQIVDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQPVLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGLHKFKEFNTALLGMIAWGLIKKRSDLW
Homology
BLAST of MS004699 vs. NCBI nr
Match: XP_025664883.1 (uncharacterized protein LOC112763420 [Arachis hypogaea])

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-48
Identity = 92/206 (44.66%), Postives = 136/206 (66.02%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           ISHL FADD++LFAEAN+DQ  ++   L  FC++S QKV+  KT ++FS+NV H  + +I
Sbjct: 765 ISHLCFADDIILFAEANVDQANIINKCLEAFCKSSGQKVSKDKTRVFFSRNVGHNVRTEI 824

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
            +V  F  T ++ KYLG+PI+H ++     + IINK+ + L+SW A+SLSLAG  TLV+ 
Sbjct: 825 SNVMQFTRTDDLRKYLGVPILHSKVTKHTFEGIINKLHVRLNSWKASSLSLAGRTTLVKS 884

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           VL ++P ++MH    P   C  +D++CRN +WG T Q  ++HL++WK I +PK  G LG+
Sbjct: 885 VLSSMPIYNMHSALLPTATCNSIDRICRNFIWGDTDQNKKVHLLNWKKICEPKQSGGLGI 944

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
               + N A +    WGLI ++ DLW
Sbjct: 945 RHAGQMNQAFMMKAGWGLIARKDDLW 970

BLAST of MS004699 vs. NCBI nr
Match: XP_016164673.1 (uncharacterized protein LOC107607211 [Arachis ipaensis])

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-48
Identity = 92/206 (44.66%), Postives = 136/206 (66.02%), Query Frame = 0

Query: 1    ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
            ISHL FADD++LFAEAN+DQ  ++   L  FC++S QKV+  KT ++FS+NV H  + +I
Sbjct: 1215 ISHLCFADDIILFAEANVDQANIINKCLEAFCKSSGQKVSKDKTRVFFSRNVGHNVRTEI 1274

Query: 61   VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
             +V  F  T ++ KYLG+PI+H ++     + IINK+ + L+SW A+SLSLAG  TLV+ 
Sbjct: 1275 SNVMQFTRTDDLRKYLGVPILHSKVTKHTFEGIINKLHVRLNSWKASSLSLAGRTTLVKS 1334

Query: 121  VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
            VL ++P ++MH    P   C  +D++CRN +WG T Q  ++HL++WK I +PK  G LG+
Sbjct: 1335 VLSSMPIYNMHSALLPTATCNSIDRICRNFIWGDTDQNKKVHLLNWKKICEPKQSGGLGI 1394

Query: 181  HKFKEFNTALLGMIAWGLIKKRSDLW 207
                + N A +    WGLI ++ DLW
Sbjct: 1395 RHAGQMNQAFMMKAGWGLIARKDDLW 1420

BLAST of MS004699 vs. NCBI nr
Match: RYR74850.1 (hypothetical protein Ahy_A02g009560 [Arachis hypogaea])

HSP 1 Score: 199.1 bits (505), Expect = 3.6e-47
Identity = 94/206 (45.63%), Postives = 137/206 (66.50%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           +SHL FADDL+LFAEAN+DQ  V+K  L+ FCE+S Q V+  KT I+FS NV    +++I
Sbjct: 675 LSHLCFADDLILFAEANMDQASVIKRCLNAFCESSGQTVSQEKTRIFFSSNVGGPIREEI 734

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
            D  GF  T N+GKYLG+P+ H ++ +S   +II+K++  L+SW A+SLSLAG  TLV+ 
Sbjct: 735 SDALGFARTDNLGKYLGVPLHHNKVSSSTFDDIISKLNTRLNSWKASSLSLAGRNTLVKS 794

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           VL ++P+++M     P   C  +D+ CRN LWG T+Q  +IH +SW+ + + K  G LG+
Sbjct: 795 VLSSIPSYTMQTALLPSTTCNAIDRKCRNFLWGETAQSKKIHRLSWRKVGEHKNNGGLGI 854

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
              +  N A +  + WGLI+K+  LW
Sbjct: 855 RHARTLNRAFMMKVGWGLIEKKDALW 880

BLAST of MS004699 vs. NCBI nr
Match: XP_025679132.1 (uncharacterized protein LOC112779089 [Arachis hypogaea])

HSP 1 Score: 198.0 bits (502), Expect = 8.1e-47
Identity = 90/206 (43.69%), Postives = 137/206 (66.50%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           +SHL FADDL+LFAEA++ Q +++  VL +FC++S +KVNN KT I+FS NV H  +++I
Sbjct: 62  LSHLCFADDLILFAEADVQQAKIINKVLEEFCKSSGKKVNNEKTRIFFSNNVGHTIREEI 121

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
            +   F  T ++GKYLG+PI+H ++     K +INK++  L++W A++LSLAG  TLV+ 
Sbjct: 122 SNSLNFSRTDDLGKYLGVPILHSKVSKDTYKNVINKMNSRLNNWKASALSLAGRTTLVKS 181

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           +L +LP++++     P   C  +D+ C N LWG T Q  ++H++SW  I KPKV G LGL
Sbjct: 182 ILSSLPSYTIQTAILPTNTCNLIDRKCINFLWGDTEQTKKVHILSWDKINKPKVSGGLGL 241

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
              K+ N + +  + WGLI  +  LW
Sbjct: 242 RHAKDVNHSFMMKLGWGLIANKDSLW 267

BLAST of MS004699 vs. NCBI nr
Match: QHO25231.1 (Putative ribonuclease H protein [Arachis hypogaea])

HSP 1 Score: 196.8 bits (499), Expect = 1.8e-46
Identity = 92/206 (44.66%), Postives = 135/206 (65.53%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           ISHL FADD++LFAEAN+DQ  V+   L  FC +S Q ++  KT ++FSKNV H  + ++
Sbjct: 106 ISHLCFADDIILFAEANIDQENVINKCLEAFCGSSGQSISREKTRVFFSKNVGHTVRAEL 165

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
            +V  F  T ++GKYLG+PI+H ++     + IINK+   L++W A+SLSLAG +TLV+ 
Sbjct: 166 SNVLQFARTDDLGKYLGVPILHSKVSKHTFEGIINKLQARLNAWKASSLSLAGRVTLVKS 225

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           VL ++P ++M     P   C  +D++CRN LWG+T Q  +IHLISWK++ +PK  G LG+
Sbjct: 226 VLSSMPLYNMQSAVLPSYTCNMIDRICRNFLWGNTEQTKKIHLISWKNVCEPKSGGGLGI 285

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
               + N A +    WGLI ++  LW
Sbjct: 286 RHASQVNQAFMMKAGWGLIAQKEALW 311

BLAST of MS004699 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-23
Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 0

Query: 78  IPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQPVLQALPTHSMHIFRFPV 137
           +P++  R+      EI+ +VS  +S W   +LS AG +TL + VL ++P HSM     P 
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 138 LVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGLHKFKEFNTALLGMIAWG 197
            +  +LDQL R  LWG T+++ + HL+ W  +  PK EG LG+   K  N AL+  + W 
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120

Query: 198 LIKKRSDLW 207
           L+++++ LW
Sbjct: 121 LLQEKNSLW 129

BLAST of MS004699 vs. ExPASy TrEMBL
Match: A0A445EHD6 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g009560 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 94/206 (45.63%), Postives = 137/206 (66.50%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           +SHL FADDL+LFAEAN+DQ  V+K  L+ FCE+S Q V+  KT I+FS NV    +++I
Sbjct: 675 LSHLCFADDLILFAEANMDQASVIKRCLNAFCESSGQTVSQEKTRIFFSSNVGGPIREEI 734

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
            D  GF  T N+GKYLG+P+ H ++ +S   +II+K++  L+SW A+SLSLAG  TLV+ 
Sbjct: 735 SDALGFARTDNLGKYLGVPLHHNKVSSSTFDDIISKLNTRLNSWKASSLSLAGRNTLVKS 794

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           VL ++P+++M     P   C  +D+ CRN LWG T+Q  +IH +SW+ + + K  G LG+
Sbjct: 795 VLSSIPSYTMQTALLPSTTCNAIDRKCRNFLWGETAQSKKIHRLSWRKVGEHKNNGGLGI 854

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
              +  N A +  + WGLI+K+  LW
Sbjct: 855 RHARTLNRAFMMKVGWGLIEKKDALW 880

BLAST of MS004699 vs. ExPASy TrEMBL
Match: A0A151RCT4 (Putative ribonuclease H protein At1g65750 family (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_038215 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 98/206 (47.57%), Postives = 133/206 (64.56%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           +SHL FADDL+LF+EA+LDQ+EV+K  L  FC++S QKV+  KT I+FSKNV    +++I
Sbjct: 671 LSHLAFADDLILFSEASLDQVEVIKACLELFCKSSGQKVSLEKTRIFFSKNVGWSVREEI 730

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
               GF+ T N+GKYLG+PI H R+       IINKV+  LSSW A +LS AG +TL + 
Sbjct: 731 SSALGFQRTDNLGKYLGVPIQHDRVNRRLYSSIINKVNQRLSSWKAKTLSFAGRLTLTKF 790

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           VL  LP ++M     P  +C  +D+ CR+ LWGH  ++ RIH ++W  I KPK EG LGL
Sbjct: 791 VLVTLPMYTMQTAFLPRKICDDIDKECRSFLWGHKGEQQRIHAVAWSVICKPKAEGGLGL 850

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
              ++ N AL+    W L   +S LW
Sbjct: 851 RDSRKVNKALMMKNGWSLCTDQSKLW 876

BLAST of MS004699 vs. ExPASy TrEMBL
Match: A0A151SZM7 (Putative ribonuclease H protein At1g65750 family (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_015642 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 3.7e-45
Identity = 90/206 (43.69%), Postives = 136/206 (66.02%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           +SHL FADDL+LFAEA+L+Q+EV++  L+ FC +S QKV+  KT ++FSKNV    ++ I
Sbjct: 10  LSHLAFADDLILFAEASLEQVEVIQDCLTSFCASSGQKVSLDKTRVFFSKNVSFSARESI 69

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
               GF+ T N+GKYLGIP  H R+  S+ ++II K++  LS W A +LS AG +TL + 
Sbjct: 70  SAALGFQQTGNLGKYLGIPAHHSRVNRSSYQDIIEKLNQRLSGWKARNLSFAGRLTLTKS 129

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           VL+ALP+++M   + P L+C ++D++CRN LWG    + + H + W ++  PK  G LGL
Sbjct: 130 VLEALPSYTMQTVQLPNLLCDEIDRICRNFLWGDNQIQKKCHAVGWGTLCYPKEYGGLGL 189

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
            + ++ NT+ +    W LI +   LW
Sbjct: 190 RRMRDVNTSFMMKNCWSLITEPQKLW 215

BLAST of MS004699 vs. ExPASy TrEMBL
Match: A0A6P4B3X6 (uncharacterized protein LOC107461787 OS=Arachis duranensis OX=130453 GN=LOC107461787 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 8.2e-45
Identity = 92/206 (44.66%), Postives = 131/206 (63.59%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           ISHL FADD++LFAEA +DQ  ++   L  FC++S Q V+  KT I+FSKNV H  + +I
Sbjct: 591 ISHLCFADDIILFAEAKVDQANIINKCLEAFCQSSGQNVSKEKTRIFFSKNVGHMVRTEI 650

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
            +V  F  T ++GKYLG+P++H ++     + IINK+   L+S  A+SLSLAG  TLV+ 
Sbjct: 651 SNVLQFARTDDLGKYLGVPVLHSKVTKHTFEGIINKLHARLNSSKASSLSLAGRTTLVKS 710

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
           VL ++P ++M     P   C  +D++CRN +WG T Q  +IHL++WK I +PK  G LG+
Sbjct: 711 VLSSMPLYNMQSAILPASTCNTIDRICRNFIWGDTDQNKKIHLLNWKMICEPKHTGGLGI 770

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
                 N A +    WGLI K+ DLW
Sbjct: 771 RHASLGNKAFMMKAGWGLIAKKDDLW 796

BLAST of MS004699 vs. ExPASy TrEMBL
Match: A0A444Y771 (Reverse transcriptase domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g093845 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 86/206 (41.75%), Postives = 136/206 (66.02%), Query Frame = 0

Query: 1   ISHLMFADDLLLFAEANLDQIEVVKTVLSKFCEASVQKVNNFKTIIYFSKNVPHEEQQQI 60
           +SHL FADD++LF +A+++Q+EVV  +L  FC+ S QKVN  K+ +YFS N+    ++++
Sbjct: 570 LSHLCFADDIVLFGKASMEQVEVVWGILDLFCKCSGQKVNYVKSCVYFSNNMCFARKKEL 629

Query: 61  VDVGGFRVTSNVGKYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQP 120
            D  G R+T+N+GKYLG+P++HGR      + I+++++  LSSW A +LSLAG +TL Q 
Sbjct: 630 SDALGMRLTNNMGKYLGVPLLHGRSKKEDFQFILDRMANRLSSWKAKNLSLAGKVTLTQS 689

Query: 121 VLQALPTHSMHIFRFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGL 180
            L ++P++ M   + P+ +C  +D++CRN LW   S   ++HL+SW+ +  PK +G LGL
Sbjct: 690 ALASIPSYVMQTMKLPLSICDSIDKICRNFLWRSVSSGRKLHLMSWEKVCLPKSQGSLGL 749

Query: 181 HKFKEFNTALLGMIAWGLIKKRSDLW 207
              +  N A L  +AW LI  +  LW
Sbjct: 750 KPARVLNNANLMKLAWKLIHNKDALW 775

BLAST of MS004699 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15
Identity = 34/114 (29.82%), Postives = 60/114 (52.63%), Query Frame = 0

Query: 74  KYLGIPIIHGRLPASALKEIINKVSLCLSSWSAASLSLAGHMTLVQPVLQALPTHSMHIF 133
           +YLG+P++  ++  S    ++ K+ + +  W+A  LS AG + L+  V+ +L    M  F
Sbjct: 26  RYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAF 85

Query: 134 RFPVLVCKKLDQLCRNLLWGHTSQRSRIHLISWKSITKPKVEGDLGLHKFKEFN 188
           R P    K++D +C + LW      ++   ++W  +  PK EG LG+   KE N
Sbjct: 86  RLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEAN 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_025664883.11.9e-4844.66uncharacterized protein LOC112763420 [Arachis hypogaea][more]
XP_016164673.11.9e-4844.66uncharacterized protein LOC107607211 [Arachis ipaensis][more]
RYR74850.13.6e-4745.63hypothetical protein Ahy_A02g009560 [Arachis hypogaea][more]
XP_025679132.18.1e-4743.69uncharacterized protein LOC112779089 [Arachis hypogaea][more]
QHO25231.11.8e-4644.66Putative ribonuclease H protein [Arachis hypogaea][more]
Match NameE-valueIdentityDescription
P0C2F61.3e-2336.43Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A445EHD61.8e-4745.63Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g009560 PE=4 SV=1[more]
A0A151RCT41.5e-4647.57Putative ribonuclease H protein At1g65750 family (Fragment) OS=Cajanus cajan OX=... [more]
A0A151SZM73.7e-4543.69Putative ribonuclease H protein At1g65750 family (Fragment) OS=Cajanus cajan OX=... [more]
A0A6P4B3X68.2e-4544.66uncharacterized protein LOC107461787 OS=Arachis duranensis OX=130453 GN=LOC10746... [more]
A0A444Y7711.4e-4441.75Reverse transcriptase domain-containing protein OS=Arachis hypogaea OX=3818 GN=A... [more]
Match NameE-valueIdentityDescription
AT3G24255.13.9e-1529.82RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 1..196
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 1..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS004699.1MS004699.1mRNA