MS004662 (gene) Bitter gourd (TR) v1

Overview


Name	MS004662
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	pathogen-related protein-like
Location	scaffold564: 530505 .. 532086 (-)
RNA-Seq Expression	MS004662
Synteny	MS004662

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAGTGGAGCTAAGGAAGATCCATATCGTTGGCTGCTCAATGGGGACGTAGAGAAGAACACCACTTGGAAATTTGGAGCTCCTCCCAACTATGAAGCTGTCAACAACCTCTTTGAACAAGGAAGAACTAAGGTGAATCCCCACACAATATAGTTTAAGACAACACAACTTTTATATAGTATCCGAGTTATGTGTTGTTGATTACAAACACTTTTTGAAATTTATTGTGATGTTTCCCTGTTTGATTAGAATTGCTTAGAAAATGTTTAAATTTCATAAACAATGGCAAGTTTTGATCGTATAATTTCCATTTTAATTCTTCAACATTCAAAGAATAACTATATATATTAATTTTTGTTATTATTATAATACCTAATATCTAGATTATTTATAACCTATGTGGCTAGTATACGATGGGTTAGTATGCATATCGGAAGTCTAACAATTAACCATCAAATAATGGCAAATCTTTCTTTTTTTTAGTTCTAAGACTAAAATTGACATTTTAAAATTTATGGACTAAATTAGAATAAAATCAAATCATTTTAAAATTCATTTAACGTTATTAAATAATAATGAGATTTAAACTACCGATATAAGTGTTCAAATACTTTAATTAATATTACGGGCATGTTTGTGCCATCATCAAAAATGAGATTTGACATGATTTTTTTTTCAGACTTATTATGATGTTGGGACTACATAGTCAAACATGATACTTTTAAACAAAGCATATATTAGAATTTCTTCTAAAAATGTTTATAGTCTAAAAAGTTTTTGGAAATTATATCCTATCTACTTGGTGTTTGGAAGATTTGGCCTCCTGGATCTCTGGAGGAAGAGGTGCAAAACTTGGTCAAGAATTGGGAACTGGAGAATATCAACAAAGTGGTACCTGAGGACTTCAAAATAATGGATCCCAAGAAAGTAACTTTCAGTCTCAATGGTACTAATCTCCAATCCAACAAACACTCTTGTTTTTCAACTGGCTTTTCACTCTAAACTTTCAATTTTCATGTCGTTTTTCCAGGAAGGAAGCCCATAACCTTGGAGGAGAAGCGGAAGTTAGGCGGTGGGTACAACGCTTCGCTTCAAACCTCTCTTCCCGCAAAGTACAGACTGTACAACCTCGAAGAGGAAACCGCAGAGACATCTAATAAGCTTTTCACGACAACTTTCCCCCGTGGGTTTGCCCTCGAGGTCGTTAGGGTCTACGCGGGGCCACCGGTGATTGTGTACAAGTTCAGGCATTGGGCGTTCATGGAAGGCCCTTACAAAGGGCATGCTCCCACAGGTGAAATGGTTGAACTCTATGGCATTGGAATCTTTGAGGTAAAAGGAAATGAAAAGTTTACTCTTTGATCACAACATTAAATACCAAAAATATATATTTATAATAATGTTGAGCTTTGGTTTTGGATTTTTGTAGTTGGATGAGAATAAGAAGATAGTGAAGGTGGAGATGTTTTATGATCCAGCAGAGTTGCTTGGGCCTCTTGTGAAGGGTCCTATCTTGGATGATTCTGTTGAGAAGGGGAAGGAAATTTCAGGCTGCCCAATCCTCAAGAATTTGGGA

mRNA sequence

ATGGCTTCAAGTGGAGCTAAGGAAGATCCATATCGTTGGCTGCTCAATGGGGACGTAGAGAAGAACACCACTTGGAAATTTGGAGCTCCTCCCAACTATGAAGCTGTCAACAACCTCTTTGAACAAGGAAGAACTAAGATTTGGCCTCCTGGATCTCTGGAGGAAGAGGTGCAAAACTTGGTCAAGAATTGGGAACTGGAGAATATCAACAAAGTGGTACCTGAGGACTTCAAAATAATGGATCCCAAGAAAGTAACTTTCAGTCTCAATGGAAGGAAGCCCATAACCTTGGAGGAGAAGCGGAAGTTAGGCGGTGGGTACAACGCTTCGCTTCAAACCTCTCTTCCCGCAAAGTACAGACTGTACAACCTCGAAGAGGAAACCGCAGAGACATCTAATAAGCTTTTCACGACAACTTTCCCCCGTGGGTTTGCCCTCGAGGTCGTTAGGGTCTACGCGGGGCCACCGGTGATTGTGTACAAGTTCAGGCATTGGGCGTTCATGGAAGGCCCTTACAAAGGGCATGCTCCCACAGGTGAAATGGTTGAACTCTATGGCATTGGAATCTTTGAGTTGGATGAGAATAAGAAGATAGTGAAGGTGGAGATGTTTTATGATCCAGCAGAGTTGCTTGGGCCTCTTGTGAAGGGTCCTATCTTGGATGATTCTGTTGAGAAGGGGAAGGAAATTTCAGGCTGCCCAATCCTCAAGAATTTGGGA

Coding sequence (CDS)

ATGGCTTCAAGTGGAGCTAAGGAAGATCCATATCGTTGGCTGCTCAATGGGGACGTAGAGAAGAACACCACTTGGAAATTTGGAGCTCCTCCCAACTATGAAGCTGTCAACAACCTCTTTGAACAAGGAAGAACTAAGATTTGGCCTCCTGGATCTCTGGAGGAAGAGGTGCAAAACTTGGTCAAGAATTGGGAACTGGAGAATATCAACAAAGTGGTACCTGAGGACTTCAAAATAATGGATCCCAAGAAAGTAACTTTCAGTCTCAATGGAAGGAAGCCCATAACCTTGGAGGAGAAGCGGAAGTTAGGCGGTGGGTACAACGCTTCGCTTCAAACCTCTCTTCCCGCAAAGTACAGACTGTACAACCTCGAAGAGGAAACCGCAGAGACATCTAATAAGCTTTTCACGACAACTTTCCCCCGTGGGTTTGCCCTCGAGGTCGTTAGGGTCTACGCGGGGCCACCGGTGATTGTGTACAAGTTCAGGCATTGGGCGTTCATGGAAGGCCCTTACAAAGGGCATGCTCCCACAGGTGAAATGGTTGAACTCTATGGCATTGGAATCTTTGAGTTGGATGAGAATAAGAAGATAGTGAAGGTGGAGATGTTTTATGATCCAGCAGAGTTGCTTGGGCCTCTTGTGAAGGGTCCTATCTTGGATGATTCTGTTGAGAAGGGGAAGGAAATTTCAGGCTGCCCAATCCTCAAGAATTTGGGA

Protein sequence

MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNLVKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYRLYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGEMVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG

Homology

[Close]

BLAST of MS004662 vs. NCBI nr
Match: XP_022143666.1 (pathogen-related protein-like [Momordica charantia])

HSP 1 Score: 500.7 bits (1288), Expect = 6.8e-138
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL
Sbjct: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VKNWE+ENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR
Sbjct: 61  VKNWEVENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE
Sbjct: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG
Sbjct: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240

[Close]

BLAST of MS004662 vs. NCBI nr
Match: XP_004139673.1 (pathogen-related protein [Cucumis sativus] >KGN44499.1 hypothetical protein Csa_016309 [Cucumis sativus])

HSP 1 Score: 458.0 bits (1177), Expect = 5.1e-125
Identity = 210/240 (87.50%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           M+SSG  EDPYRW+LNGDVEKNTTWKFGAPPNYEAVN LFEQGRTKIWPPGSLEEEVQNL
Sbjct: 1   MSSSGTNEDPYRWILNGDVEKNTTWKFGAPPNYEAVNKLFEQGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VK+WE+ENINKV+PEDFKIMDP KVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPA+YR
Sbjct: 61  VKSWEVENINKVIPEDFKIMDPNKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ ++ETAETSNKLFT+TFPRGFALE+V+VY GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKQETAETSNKLFTSTFPRGFALEIVQVYTGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           ++ELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKGP LDDS EKGKE+S CP+L+NLG
Sbjct: 181 LIELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGPKLDDSAEKGKELSSCPMLQNLG 240

[Close]

BLAST of MS004662 vs. NCBI nr
Match: XP_008461497.1 (PREDICTED: pathogen-related protein-like [Cucumis melo] >TYK04353.1 pathogen-related protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 209/240 (87.08%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           M S+G KEDPYRW+LNGDVEKNTTWKFGAPPNYEAVN LFEQGRTKIWPPGSLEEEVQNL
Sbjct: 1   MGSTGTKEDPYRWILNGDVEKNTTWKFGAPPNYEAVNKLFEQGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VK WE+ENINKV+PEDFKIMDP KVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPA+YR
Sbjct: 61  VKCWEVENINKVLPEDFKIMDPNKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ ++ETAETSNKLFT+TFPRGFALE+V+VY GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKQETAETSNKLFTSTFPRGFALEIVQVYTGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           ++ELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKG  LDDS EKGKE+S CP+L+NLG
Sbjct: 181 LIELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGSKLDDSAEKGKELSSCPMLQNLG 240

[Close]

BLAST of MS004662 vs. NCBI nr
Match: XP_022937385.1 (pathogen-related protein-like [Cucurbita moschata])

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-123
Identity = 208/240 (86.67%), Postives = 227/240 (94.58%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           MAS   K+DPYRWLLNGDVEKNTTW+FGAPPNYE VN LFE+GRTKIWPPGSLEEEVQNL
Sbjct: 1   MASPATKQDPYRWLLNGDVEKNTTWRFGAPPNYEGVNKLFEEGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VKNWELENINKV PED+KIMDP KVTFSLNGRKPITLEEKRKLGGGYNA+LQTSLPA+YR
Sbjct: 61  VKNWELENINKVKPEDYKIMDPSKVTFSLNGRKPITLEEKRKLGGGYNAALQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ + ETAETSNKLFTTTFPRGFALE+V+VY+GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKHETAETSNKLFTTTFPRGFALEIVQVYSGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           +VELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKGP +DDS E+GKE+S CP+LKNLG
Sbjct: 181 LVELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGPKMDDSAEEGKELSSCPMLKNLG 240

[Close]

BLAST of MS004662 vs. NCBI nr
Match: KAG6592179.1 (hypothetical protein SDJN03_14525, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025040.1 hypothetical protein SDJN02_13862, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-123
Identity = 208/240 (86.67%), Postives = 227/240 (94.58%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           MAS   K+DPYRWLLNGDVEKNTTW+FGAPPNYE VN LFE+GRTKIWPPGSLEEEVQNL
Sbjct: 1   MASPATKQDPYRWLLNGDVEKNTTWRFGAPPNYEGVNKLFEEGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VKNWELENINKV PED+KIMDP KVTFSLNGRKPITLEEKRKLGGGYNA+LQTSLPA+YR
Sbjct: 61  VKNWELENINKVKPEDYKIMDPNKVTFSLNGRKPITLEEKRKLGGGYNAALQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ + ETAETSNKLFTTTFPRGFALE+V+VY+GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKHETAETSNKLFTTTFPRGFALEIVQVYSGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           +VELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKGP +DDS E+GKE+S CP+LKNLG
Sbjct: 181 LVELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGPKMDDSAEEGKELSSCPMLKNLG 240

[Close]

BLAST of MS004662 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-62
Identity = 115/239 (48.12%), Postives = 156/239 (65.27%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           MAS+    D YR  L+GD EK T W+ GAPPNY+ VN LFE+ RTK W  GS+EE+VQ L
Sbjct: 1   MASAEGGGDKYRSFLHGDGEKKTVWRHGAPPNYDLVNKLFEEERTKEWAEGSVEEKVQRL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           +K WE+E ++KV PED K ++ K  + S NG KP+T EE   + GGYNA L T+LP ++R
Sbjct: 61  LKTWEMEMVHKVRPEDQKSVNLKNYSASTNGLKPLTREEVMAM-GGYNAFLATTLPPEHR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGP--PVIVYKFRHWAFMEGPYKGHAPT 180
           +Y+ E E+ E++   F T FPRGFA+EV+ VY+ P  P I +KFRHW +MEGP+KGH P 
Sbjct: 121 IYDPEAESVESATSTFLTAFPRGFAIEVLDVYSSPSAPRIAFKFRHWGYMEGPFKGHPPH 180

Query: 181 GEMVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILK 238
           G  VE +G+ +F +DE+ K+ K E FY+    L   +  P    S       SGCP+++
Sbjct: 181 GGRVEFFGVCVFHVDEDTKVEKAEFFYERGNFLASFLTAPAASASA------SGCPVMR 232

[Close]

BLAST of MS004662 vs. ExPASy TrEMBL
Match: A0A6J1CQZ3 (pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111013517 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.3e-138
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL
Sbjct: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VKNWE+ENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR
Sbjct: 61  VKNWEVENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE
Sbjct: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG
Sbjct: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240

[Close]

BLAST of MS004662 vs. ExPASy TrEMBL
Match: A0A0A0K6J5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G318990 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.4e-125
Identity = 210/240 (87.50%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           M+SSG  EDPYRW+LNGDVEKNTTWKFGAPPNYEAVN LFEQGRTKIWPPGSLEEEVQNL
Sbjct: 1   MSSSGTNEDPYRWILNGDVEKNTTWKFGAPPNYEAVNKLFEQGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VK+WE+ENINKV+PEDFKIMDP KVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPA+YR
Sbjct: 61  VKSWEVENINKVIPEDFKIMDPNKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ ++ETAETSNKLFT+TFPRGFALE+V+VY GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKQETAETSNKLFTSTFPRGFALEIVQVYTGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           ++ELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKGP LDDS EKGKE+S CP+L+NLG
Sbjct: 181 LIELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGPKLDDSAEKGKELSSCPMLQNLG 240

[Close]

BLAST of MS004662 vs. ExPASy TrEMBL
Match: A0A5D3BX95 (Pathogen-related protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00180 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.9e-124
Identity = 209/240 (87.08%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           M S+G KEDPYRW+LNGDVEKNTTWKFGAPPNYEAVN LFEQGRTKIWPPGSLEEEVQNL
Sbjct: 1   MGSTGTKEDPYRWILNGDVEKNTTWKFGAPPNYEAVNKLFEQGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VK WE+ENINKV+PEDFKIMDP KVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPA+YR
Sbjct: 61  VKCWEVENINKVLPEDFKIMDPNKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ ++ETAETSNKLFT+TFPRGFALE+V+VY GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKQETAETSNKLFTSTFPRGFALEIVQVYTGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           ++ELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKG  LDDS EKGKE+S CP+L+NLG
Sbjct: 181 LIELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGSKLDDSAEKGKELSSCPMLQNLG 240

[Close]

BLAST of MS004662 vs. ExPASy TrEMBL
Match: A0A1S3CG53 (pathogen-related protein-like OS=Cucumis melo OX=3656 GN=LOC103500079 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.9e-124
Identity = 209/240 (87.08%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           M S+G KEDPYRW+LNGDVEKNTTWKFGAPPNYEAVN LFEQGRTKIWPPGSLEEEVQNL
Sbjct: 1   MGSTGTKEDPYRWILNGDVEKNTTWKFGAPPNYEAVNKLFEQGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VK WE+ENINKV+PEDFKIMDP KVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPA+YR
Sbjct: 61  VKCWEVENINKVLPEDFKIMDPNKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ ++ETAETSNKLFT+TFPRGFALE+V+VY GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKQETAETSNKLFTSTFPRGFALEIVQVYTGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           ++ELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKG  LDDS EKGKE+S CP+L+NLG
Sbjct: 181 LIELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGSKLDDSAEKGKELSSCPMLQNLG 240

[Close]

BLAST of MS004662 vs. ExPASy TrEMBL
Match: A0A6J1FGG8 (pathogen-related protein-like OS=Cucurbita moschata OX=3662 GN=LOC111443690 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 208/240 (86.67%), Postives = 227/240 (94.58%), Query Frame = 0


Query: 1   MASSGAKEDPYRWLLNGDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNL 60
           MAS   K+DPYRWLLNGDVEKNTTW+FGAPPNYE VN LFE+GRTKIWPPGSLEEEVQNL
Sbjct: 1   MASPATKQDPYRWLLNGDVEKNTTWRFGAPPNYEGVNKLFEEGRTKIWPPGSLEEEVQNL 60

Query: 61  VKNWELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYR 120
           VKNWELENINKV PED+KIMDP KVTFSLNGRKPITLEEKRKLGGGYNA+LQTSLPA+YR
Sbjct: 61  VKNWELENINKVKPEDYKIMDPSKVTFSLNGRKPITLEEKRKLGGGYNAALQTSLPAEYR 120

Query: 121 LYNLEEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGE 180
           LY+ + ETAETSNKLFTTTFPRGFALE+V+VY+GPP+IVYKFRHWA+MEGPYKGHAPTGE
Sbjct: 121 LYDPKHETAETSNKLFTTTFPRGFALEIVQVYSGPPLIVYKFRHWAYMEGPYKGHAPTGE 180

Query: 181 MVELYGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILDDSVEKGKEISGCPILKNLG 240
           +VELYGIGIFELDENKKIVKVE FYDPA+LLGPLVKGP +DDS E+GKE+S CP+LKNLG
Sbjct: 181 LVELYGIGIFELDENKKIVKVEQFYDPAQLLGPLVKGPKMDDSAEEGKELSSCPMLKNLG 240

[Close]

BLAST of MS004662 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein )

HSP 1 Score: 232.3 bits (591), Expect = 4.2e-61
Identity = 108/235 (45.96%), Postives = 161/235 (68.51%), Query Frame = 0


Query: 7   KEDPYRWLLN--GDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNLVKNW 66
           + D YR +L   G V+    W++  PP++ +VN LFE+G+TK+WP GSLEE VQN +K+W
Sbjct: 6   ERDKYRSVLEDAGQVQ----WRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSW 65

Query: 67  ELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYRLYNL 126
           E+E  +K+  +DFK ++P+K    +NGR+ ++ EE  +L G YNA L+ SLP +++ Y  
Sbjct: 66  EMEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRL-GSYNALLKNSLPEEFQYYKP 125

Query: 127 EEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGEMVEL 186
           EEE+ E+S+  F +  PRGFA E++ VY+GPPVI +KFRHW + EG +KGHAPTGEMV+ 
Sbjct: 126 EEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQF 185

Query: 187 YGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILD-----DSVEKGKEISGCP 235
            G+G+ ++DE+ +  ++E++YDP EL G L+KGP +      DS +   E   CP
Sbjct: 186 LGLGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCP 235

[Close]

BLAST of MS004662 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein )

HSP 1 Score: 225.3 bits (573), Expect = 5.1e-59
Identity = 107/235 (45.53%), Postives = 159/235 (67.66%), Query Frame = 0


Query: 7   KEDPYRWLLN--GDVEKNTTWKFGAPPNYEAVNNLFEQGRTKIWPPGSLEEEVQNLVKNW 66
           + D YR +L   G V+    W++  PP++ +VN LFE+G+TK+WP GSLEE VQN +K+W
Sbjct: 6   ERDKYRSVLEDAGQVQ----WRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSW 65

Query: 67  ELENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYRLYNL 126
           E+E  +K+  +DFK ++P+K    +NG   ++ EE  +L G YNA L+ SLP +++ Y  
Sbjct: 66  EMEFSHKIRLQDFKTINPEKFKLFVNG---LSAEETLRL-GSYNALLKNSLPEEFQYYKP 125

Query: 127 EEETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGEMVEL 186
           EEE+ E+S+  F +  PRGFA E++ VY+GPPVI +KFRHW + EG +KGHAPTGEMV+ 
Sbjct: 126 EEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQF 185

Query: 187 YGIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILD-----DSVEKGKEISGCP 235
            G+G+ ++DE+ +  ++E++YDP EL G L+KGP +      DS +   E   CP
Sbjct: 186 LGLGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCP 232

[Close]

BLAST of MS004662 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein )

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-42
Identity = 78/174 (44.83%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 66  LENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYRLYNLE 125
           +E  +K+  +DFK ++P+K    +NGR+ ++ EE  +L G YNA L+ SLP +++ Y  E
Sbjct: 1   MEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRL-GSYNALLKNSLPEEFQYYKPE 60

Query: 126 EETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGEMVELY 185
           EE+ E+S+  F +  PRGFA E++ VY+GPPVI +KFRHW + EG +KGHAPTGEMV+  
Sbjct: 61  EESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFL 120

Query: 186 GIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILD-----DSVEKGKEISGCP 235
           G+G+ ++DE+ +  ++E++YDP EL G L+KGP +      DS +   E   CP
Sbjct: 121 GLGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCP 173

[Close]

BLAST of MS004662 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein )

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-42
Identity = 78/174 (44.83%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 66  LENINKVVPEDFKIMDPKKVTFSLNGRKPITLEEKRKLGGGYNASLQTSLPAKYRLYNLE 125
           +E  +K+  +DFK ++P+K    +NGR+ ++ EE  +L G YNA L+ SLP +++ Y  E
Sbjct: 1   MEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRL-GSYNALLKNSLPEEFQYYKPE 60

Query: 126 EETAETSNKLFTTTFPRGFALEVVRVYAGPPVIVYKFRHWAFMEGPYKGHAPTGEMVELY 185
           EE+ E+S+  F +  PRGFA E++ VY+GPPVI +KFRHW + EG +KGHAPTGEMV+  
Sbjct: 61  EESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFL 120

Query: 186 GIGIFELDENKKIVKVEMFYDPAELLGPLVKGPILD-----DSVEKGKEISGCP 235
           G+G+ ++DE+ +  ++E++YDP EL G L+KGP +      DS +   E   CP
Sbjct: 121 GLGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCP 173

The following BLAST results are available for this feature:

BLAST of MS004662 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143666.1	6.8e-138	99.58	pathogen-related protein-like [Momordica charantia]	[more]
XP_004139673.1	5.1e-125	87.50	pathogen-related protein [Cucumis sativus] >KGN44499.1 hypothetical protein Csa_...	[more]
XP_008461497.1	1.6e-123	87.08	PREDICTED: pathogen-related protein-like [Cucumis melo] >TYK04353.1 pathogen-rel...	[more]
XP_022937385.1	2.8e-123	86.67	pathogen-related protein-like [Cucurbita moschata]	[more]
KAG6592179.1	2.8e-123	86.67	hypothetical protein SDJN03_14525, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS004662 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P16273	6.3e-62	48.12	Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2	[more]

BLAST of MS004662 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQZ3	3.3e-138	99.58	pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111013517 PE=...	[more]
A0A0A0K6J5	2.4e-125	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G318990 PE=4 SV=1	[more]
A0A5D3BX95	7.9e-124	87.08	Pathogen-related protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CG53	7.9e-124	87.08	pathogen-related protein-like OS=Cucumis melo OX=3656 GN=LOC103500079 PE=4 SV=1	[more]
A0A6J1FGG8	1.3e-123	86.67	pathogen-related protein-like OS=Cucurbita moschata OX=3662 GN=LOC111443690 PE=4...	[more]

BLAST of MS004662 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78780.2	4.2e-61	45.96	pathogenesis-related family protein	[more]
AT1G78780.4	5.1e-59	45.53	pathogenesis-related family protein	[more]
AT1G78780.1	9.7e-42	44.83	pathogenesis-related family protein	[more]
AT1G78780.3	9.7e-42	44.83	pathogenesis-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 117..215 e-value: 2.3E-8 score: 36.4
None	No IPR available	PANTHER	PTHR31723	PATHOGENESIS-RELATED FAMILY PROTEIN	coord: 1..239
None	No IPR available	PANTHER	PTHR31723:SF8	PATHOGEN-RELATED PROTEIN-LIKE	coord: 1..239
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 135..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004662.1	MS004662.1	mRNA