
MS004646 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCAAGTGTGTGGGATGTGTTGTGGCCGGTTCGGCTTCCTGTTCCTTGGTTCTCTCTACTTTGTTTCGATGGAAACATTCTGAAGCATTCTTTCATTGCTTGGTTGGCGATGCGTGATCGACTTGTTACGTGGGATCGCTTATGCCATTGGTATTCTTCCGTTCCTGTTTCCTGTGTGTTTTGTGCTCACTTTGAGTCCCGAGATCATCTGTTCTTTGAGTACCCTTTTAGTTGGGAGGTCTGG TCAAGTGTGTGGGATGTGTTGTGGCCGGTTCGGCTTCCTGTTCCTTGGTTCTCTCTACTTTGTTTCGATGGAAACATTCTGAAGCATTCTTTCATTGCTTGGTTGGCGATGCGTGATCGACTTGTTACGTGGGATCGCTTATGCCATTGGTATTCTTCCGTTCCTGTTTCCTGTGTGTTTTGTGCTCACTTTGAGTCCCGAGATCATCTGTTCTTTGAGTACCCTTTTAGTTGGGAGGTCTGG TCAAGTGTGTGGGATGTGTTGTGGCCGGTTCGGCTTCCTGTTCCTTGGTTCTCTCTACTTTGTTTCGATGGAAACATTCTGAAGCATTCTTTCATTGCTTGGTTGGCGATGCGTGATCGACTTGTTACGTGGGATCGCTTATGCCATTGGTATTCTTCCGTTCCTGTTTCCTGTGTGTTTTGTGCTCACTTTGAGTCCCGAGATCATCTGTTCTTTGAGTACCCTTTTAGTTGGGAGGTCTGG SSVWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLAMRDRLVTWDRLCHWYSSVPVSCVFCAHFESRDHLFFEYPFSWEVW Homology
BLAST of MS004646 vs. NCBI nr
Match: XP_022157473.1 (uncharacterized protein LOC111024165 [Momordica charantia]) HSP 1 Score: 125.2 bits (313), Expect = 2.6e-25 Identity = 60/81 (74.07%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of MS004646 vs. NCBI nr
Match: XP_022158861.1 (uncharacterized protein LOC111025324 [Momordica charantia]) HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19 Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of MS004646 vs. NCBI nr
Match: XP_022149381.1 (uncharacterized protein LOC111017811 [Momordica charantia]) HSP 1 Score: 101.3 bits (251), Expect = 4.1e-18 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of MS004646 vs. NCBI nr
Match: XP_031737043.1 (uncharacterized protein LOC116402131 [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 2.6e-17 Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 0
BLAST of MS004646 vs. NCBI nr
Match: XP_031745548.1 (uncharacterized protein LOC116405965 [Cucumis sativus]) HSP 1 Score: 97.1 bits (240), Expect = 7.6e-17 Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = 0
BLAST of MS004646 vs. ExPASy TrEMBL
Match: A0A6J1DTG0 (uncharacterized protein LOC111024165 OS=Momordica charantia OX=3673 GN=LOC111024165 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.3e-25 Identity = 60/81 (74.07%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of MS004646 vs. ExPASy TrEMBL
Match: A0A6J1E271 (uncharacterized protein LOC111025324 OS=Momordica charantia OX=3673 GN=LOC111025324 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.1e-20 Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of MS004646 vs. ExPASy TrEMBL
Match: A0A6J1D875 (uncharacterized protein LOC111017811 OS=Momordica charantia OX=3673 GN=LOC111017811 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of MS004646 vs. ExPASy TrEMBL
Match: A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.9e-15 Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of MS004646 vs. ExPASy TrEMBL
Match: A0A5A7UP65 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00070 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14 Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of MS004646 vs. TAIR 10
Match: AT2G02520.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 77.8 bits (190), Expect = 4.5e-15 Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of MS004646 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 75.9 bits (185), Expect = 1.7e-14 Identity = 36/79 (45.57%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of MS004646 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 72.8 bits (177), Expect = 1.4e-13 Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of MS004646 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 67.4 bits (163), Expect = 6.0e-12 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of MS004646 vs. TAIR 10
Match: AT1G45063.1 (copper ion binding;electron carriers ) HSP 1 Score: 44.3 bits (103), Expect = 5.5e-05 Identity = 22/45 (48.89%), Postives = 27/45 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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