MS004641 (gene) Bitter gourd (TR) v1

Overview
NameMS004641
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold564: 82451 .. 82597 (-)
RNA-Seq ExpressionMS004641
SyntenyMS004641
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACTCTTGCTTGAGCAAATAAGCGAAAAGGGAGAAGTAACTGTAAGCAGAGAAAATGTCCTTAAGCAATGGAGTGAAGTCCTGCGCAAAGCTGCTGAGGTCTTCAGAATCATTGTTGATGAAATCAGGTTTTGTTACTTCGTCAGC

mRNA sequence

GAACTCTTGCTTGAGCAAATAAGCGAAAAGGGAGAAGTAACTGTAAGCAGAGAAAATGTCCTTAAGCAATGGAGTGAAGTCCTGCGCAAAGCTGCTGAGGTCTTCAGAATCATTGTTGATGAAATCAGGTTTTGTTACTTCGTCAGC

Coding sequence (CDS)

GAACTCTTGCTTGAGCAAATAAGCGAAAAGGGAGAAGTAACTGTAAGCAGAGAAAATGTCCTTAAGCAATGGAGTGAAGTCCTGCGCAAAGCTGCTGAGGTCTTCAGAATCATTGTTGATGAAATCAGGTTTTGTTACTTCGTCAGC

Protein sequence

ELLLEQISEKGEVTVSRENVLKQWSEVLRKAAEVFRIIVDEIRFCYFVS
Homology
[Close]
BLAST of MS004641 vs. NCBI nr
Match: KGN44739.2 (hypothetical protein Csa_016351, partial [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 8.4e-11
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 0 

Query: 1  ELLLEQISEKGEVTVSRENVLKQWSEVLRKAAEVFRIIVDEIRFCYFVS 50
          ELL+EQI+EKGE+TVSRENV  QW EV+ KAAEVFR IV EIRFCYF+S
Sbjct: 23 ELLVEQITEKGELTVSRENVFGQWIEVMCKAAEVFRTIVGEIRFCYFIS 71

[Close]
BLAST of MS004641 vs. ExPASy TrEMBL
Match: A0A0A0K461 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G304370 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.1e-11
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 0 

Query: 1  ELLLEQISEKGEVTVSRENVLKQWSEVLRKAAEVFRIIVDEIRFCYFVS 50
          ELL+EQI+EKGE+TVSRENV  QW EV+ KAAEVFR IV EIRFCYF+S
Sbjct: 27 ELLVEQITEKGELTVSRENVFGQWIEVMCKAAEVFRTIVGEIRFCYFIS 75

The following BLAST results are available for this feature:
BLAST of MS004641 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44739.28.4e-1177.55hypothetical protein Csa_016351, partial [Cucumis sativus][more]
BLAST of MS004641 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS004641 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4614.1e-1177.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G304370 PE=4 SV=1[more]
BLAST of MS004641 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS004641.1MS004641.1mRNA