MS004588 (gene) Bitter gourd (TR) v1

Overview


Name	MS004588
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein MODIFYING WALL LIGNIN-2-like
Location	scaffold995: 513070 .. 514598 (-)
RNA-Seq Expression	MS004588
Synteny	MS004588

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGAACAAAGTCCCAACTTCCACAAGTCAAGAGAGAAAATGATGGATTTTCCACCACTAACCTTCTAGAGTCTTTCGTTTTCCAATACCATGATTTAAAATCCCACTTCTTCTTCTTCGAGTTTCCTGGCCACCATGGAAAAGCACCCATCGGGCTTCGCAATAAGCTTTTCCATTGTCGCATTCCTCACCCTCGTCTCCTTTGCATCATGTATGGCTGCTGAATTCAACAGAACAAAAGTAAGTTTCTTTCATTTTCTTTCTCATTTCTAATATTAATTGATTAATTTTTCTTACAAAAATTTCCCTTGATCATCGGAACTGGAATCTTCCATAGAAGAAAGACCTGAAGTTGAACGGCAGATTCTGTTTCCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTTGCAAGTTTGGTCTGTTTGGTGATGGCTCAGATCATTGGAAACACCATAATCTGCCATAGCTATTGGCCAAAAGAGAAAAGAAAGAGTTGCAGCGTCAAAAGGCCTCTGCTTTCAACTACCCTTCTCATCTCTTGGTGGGTAATTATTTCTCCATACTAATCTTCCTTCTCTTTTCTTTACTTTTCAAAAATTTTTTGGAAATTAATATGTTTTAACAAACCAATTGTTTTAAAAGAAAAATAACAAAAGACCTGAAAATATAAACATATTTTGGTAGTGGGCTCAATTTTTTAGACAATTTTTCAAAGGAAGTTTGTGAAAAAACAACCGATAAGATTTAAAATGAACAGTAGTGATCTGTATTCCAGGTTGTTTGAATTGCATTTAGAAGAGATGATCATTGGAGGGAGAGCGAATAATATAAAAATAATATGCTAAAAGAACGTGGCCAGCTTTGAGGTGGTTCAAATTCCTATACATAGGATCCAAGATCTAGTAAATTACAAAATAGTATTATTAACAATAAACTGATAATAGAGCATGAGAATTATTTGAAGAATAGAGTAATTTTTTCCCAAAAGAATACATAGTAATTTTTAAACTTATCCTACAACCATAGCTATTTTTAAAAGGAATCTTTCAATAACTTTTCCAAATTTCCTTTTTAAAATATTCTCTTTAAATAGTATATTGTAAAATTCAAATTACTTTATTCTTCAAATAAATCTTTTTTTAAAAAAAAACATATACTAATTATCAAATTTGAAGTCTATGACAGGTACTAGTTTGGAGATCTATTAGACATAATTCAGAAACTTTAATATACCAAACCTATAATTTAATCAAATTAAAAAGAATTGGGGCTAAAATGGTTAAGAAAAATGAAATACCAGGGTCAGCTTCGGAATTGCGGTGGCGATGATGAGTGGAGCAACCAGCATGAGCAGGAGGCAGGAGTATGGGAAGGGGTGGGTGGAGGGAGAATGCTATGTGGTCAAAGATGGAATATTTGTTGGCGCAGCCTTATTGGTTCTCATTAATGGAGGGTCCACCATAGGCTCGGCCGCCATTGGAAGGAGGAGCCACGTCACTGGGCCCAGTCAAATACATGCACAAATTGGA

mRNA sequence

ATTGGAACAAAGTCCCAACTTCCACAAGTCAAGAGAGAAAATGATGGATTTTCCACCACTAACCTTCTAGAGTCTTTCGTTTTCCAATACCATGATTTAAAATCCACTTCTTCTTCTTCGAGTTTCCTGGCCACCATGGAAAAGCACCCATCGGGCTTCGCAATAAGCTTTTCCATTGTCGCATTCCTCACCCTCGTCTCCTTTGCATCATGTATGGCTGCTGAATTCAACAGAACAAAAAAGAAAGACCTGAAGTTGAACGGCAGATTCTGTTTCCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTTGCAAGTTTGGTCTGTTTGGTGATGGCTCAGATCATTGGAAACACCATAATCTGCCATAGCTATTGGCCAAAAGAGAAAAGAAAGAGTTGCAGCGTCAAAAGGCCTCTGCTTTCAACTACCCTTCTCATCTCTTGGGTCAGCTTCGGAATTGCGGTGGCGATGATGAGTGGAGCAACCAGCATGAGCAGGAGGCAGGAGTATGGGAAGGGGTGGGTGGAGGGAGAATGCTATGTGGTCAAAGATGGAATATTTGTTGGCGCAGCCTTATTGGTTCTCATTAATGGAGGGTCCACCATAGGCTCGGCCGCCATTGGAAGGAGGAGCCACGTCACTGGGCCCAGTCAAATACATGCACAAATTGGA

Coding sequence (CDS)

ATTGGAACAAAGTCCCAACTTCCACAAGTCAAGAGAGAAAATGATGGATTTTCCACCACTAACCTTCTAGAGTCTTTCGTTTTCCAATACCATGATTTAAAATCCACTTCTTCTTCTTCGAGTTTCCTGGCCACCATGGAAAAGCACCCATCGGGCTTCGCAATAAGCTTTTCCATTGTCGCATTCCTCACCCTCGTCTCCTTTGCATCATGTATGGCTGCTGAATTCAACAGAACAAAAAAGAAAGACCTGAAGTTGAACGGCAGATTCTGTTTCCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTTGCAAGTTTGGTCTGTTTGGTGATGGCTCAGATCATTGGAAACACCATAATCTGCCATAGCTATTGGCCAAAAGAGAAAAGAAAGAGTTGCAGCGTCAAAAGGCCTCTGCTTTCAACTACCCTTCTCATCTCTTGGGTCAGCTTCGGAATTGCGGTGGCGATGATGAGTGGAGCAACCAGCATGAGCAGGAGGCAGGAGTATGGGAAGGGGTGGGTGGAGGGAGAATGCTATGTGGTCAAAGATGGAATATTTGTTGGCGCAGCCTTATTGGTTCTCATTAATGGAGGGTCCACCATAGGCTCGGCCGCCATTGGAAGGAGGAGCCACGTCACTGGGCCCAGTCAAATACATGCACAAATTGGA

Protein sequence

IGTKSQLPQVKRENDGFSTTNLLESFVFQYHDLKSTSSSSSFLATMEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVASLVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMSRRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG

Homology

[Close]

BLAST of MS004588 vs. NCBI nr
Match: XP_022139149.1 (uncharacterized protein LOC111010123 isoform X1 [Momordica charantia])

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKL+GRFCFLPESEAFKLGVAS
Sbjct: 1   MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLSGRFCFLPESEAFKLGVAS 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS
Sbjct: 61  LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 225
           RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG
Sbjct: 121 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 179

[Close]

BLAST of MS004588 vs. NCBI nr
Match: XP_022139157.1 (uncharacterized protein LOC111010123 isoform X2 [Momordica charantia])

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-91
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRT KKDLKL+GRFCFLPESEAFKLGVAS
Sbjct: 1   MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRT-KKDLKLSGRFCFLPESEAFKLGVAS 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS
Sbjct: 61  LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 225
           RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG
Sbjct: 121 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 178

[Close]

BLAST of MS004588 vs. NCBI nr
Match: XP_023535227.1 (uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo] >KAG6591859.1 Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024724.1 hypothetical protein SDJN02_13542, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.6 bits (823), Expect = 5.3e-84
Identity = 159/179 (88.83%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           MEK PS F ISFSIVA LTL SFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 
Sbjct: 1   MEKPPSSFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAG 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           +VCL+MA IIGNTIICH+YWPKE RKSCSVKRPLLSTTLLISWVSFGIAVAMM GATSMS
Sbjct: 61  IVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 225
           RRQEYGKGWVEGECY+VKDG+FVGAALLVLINGGSTIGSAAIGRR    GP+Q+HAQIG
Sbjct: 121 RRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQIG 179

[Close]

BLAST of MS004588 vs. NCBI nr
Match: XP_022937014.1 (uncharacterized protein LOC111443438 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-83
Identity = 158/178 (88.76%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           MEK PS F ISFSIVA LTL SFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 
Sbjct: 1   MEKPPSSFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAG 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           +VCL+MA IIGNTIICH+YWPKE RKSCSVKRPLLSTTLLISWVSFGIAVAMM GATSMS
Sbjct: 61  IVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQI 224
           RRQEYGKGWVEGECY+VKDG+FVGAALLVLINGGSTIGSAAIGRR    GP+Q+HAQI
Sbjct: 121 RRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQI 178

[Close]

BLAST of MS004588 vs. NCBI nr
Match: XP_022976861.1 (uncharacterized protein LOC111477105 [Cucurbita maxima])

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-80
Identity = 155/178 (87.08%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           ME  PS F ISFSIVA LTL SFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 
Sbjct: 1   MENPPSSFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAG 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           +VCL+MA IIGNTIICH+YWPKE RKSCSVKRPLL TTLLISWVSFGIAVAM+ GATSMS
Sbjct: 61  IVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLL-TTLLISWVSFGIAVAMIMGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQI 224
           RRQEYGKGWVEGECY+VKDG+FVGAALLVLINGGSTIGSAAIGRR    GP+Q+HAQI
Sbjct: 121 RRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQI 177

[Close]

BLAST of MS004588 vs. ExPASy Swiss-Prot
Match: A2RVU1 (Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 61/152 (40.13%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 65  LVSFASCMAAEFNRTKK----------KDLKLNGRFCFLPESEAFKLGVASLVCLVMAQI 124
           L +F  C++AEF + K           KDLK +G  C+LPE+ AF LG+A+LVC+ +AQI
Sbjct: 8   LAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIAALVCVSVAQI 67

Query: 125 IGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMSRRQEYGKGW 184
           +GN +IC  +   +K ++           LL SWV+F +AV ++S   SM+R Q YGKGW
Sbjct: 68  VGNVVICRGFTKTDKTRTTI----FCIILLLFSWVNFAVAVTLISVGASMNREQIYGKGW 127

Query: 185 VEGECYVVKDGIFVGAALLVLINGGSTIGSAA 207
           +  ECY+VKDG+F  +  L +    + +G+ A
Sbjct: 128 LNRECYLVKDGVFAASGFLSVTTMAAILGAFA 155

[Close]

BLAST of MS004588 vs. ExPASy Swiss-Prot
Match: O65708 (Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.0e-26
Identity = 63/152 (41.45%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 57  FSIVAFLTLVSFASCMAAEFNRTKKKDLKLN-GRFCFLPESEAFKLGVASLVCLVMAQII 116
           +S+V  L LVSF +C AAEF RT+K+D++ +  R C++P S AF LG A+++C  +AQI+
Sbjct: 7   YSVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIV 66

Query: 117 GNTIICHSYWPKEKRKSCSVKRPLLSTT--LLISWVSFGIAVAMMSGATSMSRRQEYGKG 176
           GN ++  ++  + KR+       L   T  LL+SW +F + V ++S A SMSR Q YG+G
Sbjct: 67  GNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYGEG 126

Query: 177 WVEGECYVVKDGIFVGAALLVLINGGSTIGSA 206
           W++ +CY+VKDG+F  +  L ++  G+   SA
Sbjct: 127 WLDEDCYLVKDGVFAASGCLAILGLGALTISA 158

[Close]

BLAST of MS004588 vs. ExPASy TrEMBL
Match: A0A6J1CC41 (uncharacterized protein LOC111010123 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010123 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.1e-94
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKL+GRFCFLPESEAFKLGVAS
Sbjct: 1   MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLSGRFCFLPESEAFKLGVAS 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS
Sbjct: 61  LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 225
           RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG
Sbjct: 121 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 179

[Close]

BLAST of MS004588 vs. ExPASy TrEMBL
Match: A0A6J1CD79 (uncharacterized protein LOC111010123 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010123 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.7e-92
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRT KKDLKL+GRFCFLPESEAFKLGVAS
Sbjct: 1   MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRT-KKDLKLSGRFCFLPESEAFKLGVAS 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS
Sbjct: 61  LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 225
           RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG
Sbjct: 121 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQIG 178

[Close]

BLAST of MS004588 vs. ExPASy TrEMBL
Match: A0A6J1F9Y8 (uncharacterized protein LOC111443438 OS=Cucurbita moschata OX=3662 GN=LOC111443438 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 9.7e-84
Identity = 158/178 (88.76%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           MEK PS F ISFSIVA LTL SFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 
Sbjct: 1   MEKPPSSFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAG 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           +VCL+MA IIGNTIICH+YWPKE RKSCSVKRPLLSTTLLISWVSFGIAVAMM GATSMS
Sbjct: 61  IVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQI 224
           RRQEYGKGWVEGECY+VKDG+FVGAALLVLINGGSTIGSAAIGRR    GP+Q+HAQI
Sbjct: 121 RRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQI 178

[Close]

BLAST of MS004588 vs. ExPASy TrEMBL
Match: A0A6J1II23 (uncharacterized protein LOC111477105 OS=Cucurbita maxima OX=3661 GN=LOC111477105 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.7e-81
Identity = 155/178 (87.08%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 46  MEKHPSGFAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAS 105
           ME  PS F ISFSIVA LTL SFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 
Sbjct: 1   MENPPSSFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAG 60

Query: 106 LVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMS 165
           +VCL+MA IIGNTIICH+YWPKE RKSCSVKRPLL TTLLISWVSFGIAVAM+ GATSMS
Sbjct: 61  IVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLL-TTLLISWVSFGIAVAMIMGATSMS 120

Query: 166 RRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQI 224
           RRQEYGKGWVEGECY+VKDG+FVGAALLVLINGGSTIGSAAIGRR    GP+Q+HAQI
Sbjct: 121 RRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQI 177

[Close]

BLAST of MS004588 vs. ExPASy TrEMBL
Match: A0A0A0L099 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G247410 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.8e-80
Identity = 167/237 (70.46%), Postives = 187/237 (78.90%), Query Frame = 0


Query: 4   KSQLPQVKRENDGFSTTNLLESFV-FQYHDLKSTSSSSSFLATM----------EKHPSG 63
           KS++ QVKREN  FSTTNL  SF+ FQ HDL ++SSSSS  ++               S 
Sbjct: 4   KSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPSSSS 63

Query: 64  FAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVASLVCLVMA 123
           F ISFS+VA LTL SFASCMAAEFNRTKK+DLKLN + CFLPESEAFKLG+  L+CL+MA
Sbjct: 64  FVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCLIMA 123

Query: 124 QIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSMSRRQEYGK 183
           QIIG T+ICHSYWPKE RKSCSVK+PLLS  LLISWVSF IAV M+SGATSMSRRQEY K
Sbjct: 124 QIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQEYAK 183

Query: 184 GWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIG----RRSHV-TGPSQIHAQIG 225
           GWVEGECY+VKDGIFV AA+LVLINGGSTI SAAIG    R +HV   P+QIHAQIG
Sbjct: 184 GWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG 240

[Close]

BLAST of MS004588 vs. TAIR 10
Match: AT1G31720.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 121.3 bits (303), Expect = 9.8e-28
Identity = 64/167 (38.32%), Postives = 96/167 (57.49%), Query Frame = 0


Query: 50  PSGFAISFSIVAFLTLVSFASCMAAEFNRTKK----------KDLKLNGRFCFLPESEAF 109
           P  F + F  +    L +F  C++AEF + K           KDLK +G  C+LPE+ AF
Sbjct: 13  PKSF-LFFMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAF 72

Query: 110 KLGVASLVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMS 169
            LG+A+LVC+ +AQI+GN +IC  +   +K ++           LL SWV+F +AV ++S
Sbjct: 73  GLGIAALVCVSVAQIVGNVVICRGFTKTDKTRTTI----FCIILLLFSWVNFAVAVTLIS 132

Query: 170 GATSMSRRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAA 207
              SM+R Q YGKGW+  ECY+VKDG+F  +  L +    + +G+ A
Sbjct: 133 VGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFA 174

[Close]

BLAST of MS004588 vs. TAIR 10
Match: AT4G19370.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 119.8 bits (299), Expect = 2.8e-27
Identity = 63/152 (41.45%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 57  FSIVAFLTLVSFASCMAAEFNRTKKKDLKLN-GRFCFLPESEAFKLGVASLVCLVMAQII 116
           +S+V  L LVSF +C AAEF RT+K+D++ +  R C++P S AF LG A+++C  +AQI+
Sbjct: 7   YSVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIV 66

Query: 117 GNTIICHSYWPKEKRKSCSVKRPLLSTT--LLISWVSFGIAVAMMSGATSMSRRQEYGKG 176
           GN ++  ++  + KR+       L   T  LL+SW +F + V ++S A SMSR Q YG+G
Sbjct: 67  GNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYGEG 126

Query: 177 WVEGECYVVKDGIFVGAALLVLINGGSTIGSA 206
           W++ +CY+VKDG+F  +  L ++  G+   SA
Sbjct: 127 WLDEDCYLVKDGVFAASGCLAILGLGALTISA 158

The following BLAST results are available for this feature:

BLAST of MS004588 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139149.1	1.3e-93	99.44	uncharacterized protein LOC111010123 isoform X1 [Momordica charantia]	[more]
XP_022139157.1	1.2e-91	98.88	uncharacterized protein LOC111010123 isoform X2 [Momordica charantia]	[more]
XP_023535227.1	5.3e-84	88.83	uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo] >KAG6591859.1 ...	[more]
XP_022937014.1	2.0e-83	88.76	uncharacterized protein LOC111443438 [Cucurbita moschata]	[more]
XP_022976861.1	1.6e-80	87.08	uncharacterized protein LOC111477105 [Cucurbita maxima]	[more]

BLAST of MS004588 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVU1	1.8e-26	40.13	Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=...	[more]
O65708	4.0e-26	41.45	Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=...	[more]

BLAST of MS004588 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC41	6.1e-94	99.44	uncharacterized protein LOC111010123 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CD79	5.7e-92	98.88	uncharacterized protein LOC111010123 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1F9Y8	9.7e-84	88.76	uncharacterized protein LOC111443438 OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]
A0A6J1II23	7.7e-81	87.08	uncharacterized protein LOC111477105 OS=Cucurbita maxima OX=3661 GN=LOC111477105...	[more]
A0A0A0L099	3.8e-80	70.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G247410 PE=4 SV=1	[more]

BLAST of MS004588 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31720.1	9.8e-28	38.32	Protein of unknown function (DUF1218)	[more]
AT4G19370.1	2.8e-27	41.45	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 106..196 e-value: 2.7E-16 score: 59.8
None	No IPR available	PANTHER	PTHR31769:SF6	PROTEIN MODIFYING WALL LIGNIN-1	coord: 51..208
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 51..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004588.1	MS004588.1	mRNA