MS004526 (gene) Bitter gourd (TR) v1

Overview


Name	MS004526
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein HAPLESS 2 isoform X1
Location	scaffold995: 33133 .. 34907 (+)
RNA-Seq Expression	MS004526
Synteny	MS004526

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACGTTGCCAGTTCGGTTGCCTCAGGATTCTTTTCAGCCGTTGGCAAACTCTTTCGATCCCCACTGGATTTTCTTTCTGGAAAATCCTGCAGGTTGGTACCATTTTTCCTGTTTCTTTTGCTATTCTCTTCAAGTGGATTCTACCCATAAACTCAATGATTTTTCGGATTTTGTCATTTTCTTTGACCTAATTTTGACGTATTCTGTGCCTTTTGATTGAATATTGTTTATCTGATTTTGTCACTGCCCACATATGCTCGCAGTTCGGTGTGTGGATCAACATGGGATTTCATATGTTACATAGAAAATTTCTGCGTCGCCAATTTGCTAAAGTTGGGCATGGTCTTGATCCTTTCATTATTTGGTGAGTGAAACAGAAAAGTTTTTTTTGTGTATCTCAGTACCTTGGTATTTATAATATGTTGGGATTTGTCTGTTTCCAATGGTTGGGAGAAGCAGCCTTACAGCTTAAAGCCTCGCATATTAAGGTCCAAAGTTATCTAATAATATAACTCAATATCTTATTAAGTATCCAACTACTCTTAGTTTGGTCAGTATAGCAAGGTCACCCTCTGGATTAGATTTGATTACATTTAATGATACACCATTAACTTCCTAAAATTGCAGGCCTGCTTCTCGTATTTACAGAACCATTTCTATTGTGAACTAATTTGATTTGGTATGGAAAAATACAATTGTTTCTTCTACATTTCGAAATGTATAATTCACATCTCAACTTTTTAGTTAACAAAATAAAGTTTGTGGCCATCAGCCTACGATGAAATGCCAAGGTCAATAGCTTACTGGTGCAATAGTAAAATGCCAACTAAGTTGATATGGTGTGGGAAAATGTAATGTTTCCCCTACGTTTTGAAATGTATATCCATATTTGACAACTTCTAGTTATCTGAATGAAGTTTTAGGTCATCAGCTTATGGTAAAATGCCAACATGAATTGCTTGCTGATGTAATTGTAATTAGATAGGAAATACAATCTACTGCATATCCCTTAATACTGTTATTCCTGCTGTGATTCTAAGTCATGGGCTCACACGATCAAAAGAAATTTCTTAGGAAATGGATCCAAATCCAGCTTAGATGCTTCAGTTTCAAGTGATAGTGAGAAGTTCTAGATGCTTAAAACTTCGTACAAATTATATGTACATTGTCACTTGTTTAATGCATGGAACATAAGTTCATCACTTGAATTTGCCTTTTTTTTTTTTTCCTTTCCTTTTTTGGAATTGTATGCAGTTATTTTGCTCCTGTATTTGTTACATAAAATTGGCATCTTTGGATGCATCTGTCGGGGGCTCTGCAGAATGACGTGGACATGTATAGCTTCATACTTCTATGCATGGGATTACTGCTGCACTTTCATGTGTATCAAGCTTGGCAGTGTCAAAAGAACAAGAAGACGGCGCCGTAGAAGAAGAGACCTGGAAGAAGAGTTTGAAAGTGAAGGAGGAAAACACCGGTATGGGTCATCGAGCGATTCGAGTAGTGTCCCTGAACGCATTGAGTTGAGAAGTAGTCAACGGGCATCTCGTAGATGGAGGATGAACCACAGAGGTTCTCAAATGAGAAAGGCATTGAGGCCTAAGAGTCATGGAATTCGAGTACGAAGCGGTCGAACATTGGTCTATGGTAAGCATAGAAGAAAATCCAGTGAGGTTGTGAATCGTTTGGGTGAGATCCATAGCCTTGGAAGGCATGGATCATCTAAGTTTGTGCATGAAGAAATAAGGTACAAAAGAGGAAGGCAGAAA

mRNA sequence

ATGGGCAACGTTGCCAGTTCGGTTGCCTCAGGATTCTTTTCAGCCGTTGGCAAACTCTTTCGATCCCCACTGGATTTTCTTTCTGGAAAATCCTGCAGTTCGGTGTGTGGATCAACATGGGATTTCATATGTTACATAGAAAATTTCTGCGTCGCCAATTTGCTAAAGTTGGGCATGGTCTTGATCCTTTCATTATTTGTTATTTTGCTCCTGTATTTGTTACATAAAATTGGCATCTTTGGATGCATCTGTCGGGGGCTCTGCAGAATGACGTGGACATGTATAGCTTCATACTTCTATGCATGGGATTACTGCTGCACTTTCATGTGTATCAAGCTTGGCAGTGTCAAAAGAACAAGAAGACGGCGCCGTAGAAGAAGAGACCTGGAAGAAGAGTTTGAAAGTGAAGGAGGAAAACACCGGTATGGGTCATCGAGCGATTCGAGTAGTGTCCCTGAACGCATTGAGTTGAGAAGTAGTCAACGGGCATCTCGTAGATGGAGGATGAACCACAGAGGTTCTCAAATGAGAAAGGCATTGAGGCCTAAGAGTCATGGAATTCGAGTACGAAGCGGTCGAACATTGGTCTATGGTAAGCATAGAAGAAAATCCAGTGAGGTTGTGAATCGTTTGGGTGAGATCCATAGCCTTGGAAGGCATGGATCATCTAAGTTTGTGCATGAAGAAATAAGGTACAAAAGAGGAAGGCAGAAA

Coding sequence (CDS)

ATGGGCAACGTTGCCAGTTCGGTTGCCTCAGGATTCTTTTCAGCCGTTGGCAAACTCTTTCGATCCCCACTGGATTTTCTTTCTGGAAAATCCTGCAGTTCGGTGTGTGGATCAACATGGGATTTCATATGTTACATAGAAAATTTCTGCGTCGCCAATTTGCTAAAGTTGGGCATGGTCTTGATCCTTTCATTATTTGTTATTTTGCTCCTGTATTTGTTACATAAAATTGGCATCTTTGGATGCATCTGTCGGGGGCTCTGCAGAATGACGTGGACATGTATAGCTTCATACTTCTATGCATGGGATTACTGCTGCACTTTCATGTGTATCAAGCTTGGCAGTGTCAAAAGAACAAGAAGACGGCGCCGTAGAAGAAGAGACCTGGAAGAAGAGTTTGAAAGTGAAGGAGGAAAACACCGGTATGGGTCATCGAGCGATTCGAGTAGTGTCCCTGAACGCATTGAGTTGAGAAGTAGTCAACGGGCATCTCGTAGATGGAGGATGAACCACAGAGGTTCTCAAATGAGAAAGGCATTGAGGCCTAAGAGTCATGGAATTCGAGTACGAAGCGGTCGAACATTGGTCTATGGTAAGCATAGAAGAAAATCCAGTGAGGTTGTGAATCGTTTGGGTGAGATCCATAGCCTTGGAAGGCATGGATCATCTAAGTTTGTGCATGAAGAAATAAGGTACAAAAGAGGAAGGCAGAAA

Protein sequence

MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTRRRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKALRPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK

Homology

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BLAST of MS004526 vs. NCBI nr
Match: XP_022154011.1 (uncharacterized protein LOC111021352 [Momordica charantia])

HSP 1 Score: 457.2 bits (1175), Expect = 8.5e-125
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV
Sbjct: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
           LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR
Sbjct: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RRR RRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL
Sbjct: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           RPKS GIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK
Sbjct: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245

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BLAST of MS004526 vs. NCBI nr
Match: XP_038897053.1 (uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida])

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-96
Identity = 185/238 (77.73%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+ SG FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCV+NLLK+GMV
Sbjct: 1   MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMV 60

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
           LILS FV+L L LLHKIGIFGCI RGLC+M WTC+ASYFYAW+YCCTFMCIKL SVKRTR
Sbjct: 61  LILSYFVLLFLCLLHKIGIFGCIGRGLCKMIWTCLASYFYAWEYCCTFMCIKLASVKRTR 120

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RR  RRRDLEEEFESE GK ++GS+SDSS+VPE +E RSS+RA RRWR NHR S+MRK+L
Sbjct: 121 RRHLRRRDLEEEFESEEGKCQHGSTSDSSNVPEHVESRSSRRACRRWRRNHRSSRMRKSL 180

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           RP+ HGIRVRSGR LVYGKHRRKS EV N L EIHS G +GSSKFVH+E +Y+R  Q+
Sbjct: 181 RPRGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRESQR 238

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BLAST of MS004526 vs. NCBI nr
Match: XP_008444189.1 (PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93
Identity = 182/238 (76.47%), Postives = 207/238 (86.97%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+K+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
            ILS FV+LLLYLLHKIGIFGCI RGLCRM WTC+ASYFYAW+YCC+FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RR  RRRDLEEEFESE GK ++ S+SDSS+V E +E RSS+ +SRRWR NH+ SQ RK+L
Sbjct: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           RPK HG+RVRSGR LVYGKHRRKS EV N   EI S G +GSSKFVH+E +Y+RGRQ+
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

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BLAST of MS004526 vs. NCBI nr
Match: XP_004142706.1 (protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 protein HAPLESS 2 isoform X1 [Cucumis sativus] >KGN54547.1 hypothetical protein Csa_012210 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 7.3e-92
Identity = 179/238 (75.21%), Postives = 204/238 (85.71%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANLLK+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLLKMGMV 60

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
            ILS FV+LLLYLLHKIGIF CI RGLCRM WTC+ASYFYAW+YCC FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFRCIGRGLCRMIWTCLASYFYAWEYCCGFMCIKLASVKRTR 120

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RR  RRRD+EEEFE E GK R+ S+SDS++V E +E +SS+R S+RWR NHR SQ RK+L
Sbjct: 121 RRHVRRRDMEEEFEIEEGKCRHESTSDSTNVLEHVESKSSRRVSQRWRRNHRDSQRRKSL 180

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           RPK HG+RVRSGR LVYGKHRRKS EV N L EI S G +GSSK+VH+E +Y+RGR +
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

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BLAST of MS004526 vs. NCBI nr
Match: KAG6608041.1 (Protein HAPLESS 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.1 bits (793), Expect = 1.7e-80
Identity = 169/238 (71.01%), Postives = 188/238 (78.99%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+ASG F A+ K+F SPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLK+GMV
Sbjct: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
           +IL+ FV+LLLYL HKIGIFGCI RGLCRM WTC+ASY +AW+YCCTFMCIKL SVKRTR
Sbjct: 68  VILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRTR 127

Query: 121 RRRRRRRDLEEEFES-EGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKA 180
           RRR RRRDLEEE ES E  KHRYGSSSDSS+  E+IE R S+R SR+ R +HRGSQ  K 
Sbjct: 128 RRRHRRRDLEEELESEEEAKHRYGSSSDSSNDSEKIESRRSKRVSRKRRRSHRGSQTSKT 187

Query: 181 LRPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQ 238
           LRP+SHGIRVRSGR LVY K                    HGSSK V +E +Y+RGRQ
Sbjct: 188 LRPRSHGIRVRSGRVLVYSK--------------------HGSSKIVQKERKYRRGRQ 225

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BLAST of MS004526 vs. ExPASy TrEMBL
Match: A0A6J1DMF3 (uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021352 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.1e-125
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV
Sbjct: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
           LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR
Sbjct: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RRR RRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL
Sbjct: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           RPKS GIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK
Sbjct: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245

[Close]

BLAST of MS004526 vs. ExPASy TrEMBL
Match: A0A1S4DVV8 (protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.4e-94
Identity = 182/238 (76.47%), Postives = 207/238 (86.97%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+K+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
            ILS FV+LLLYLLHKIGIFGCI RGLCRM WTC+ASYFYAW+YCC+FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RR  RRRDLEEEFESE GK ++ S+SDSS+V E +E RSS+ +SRRWR NH+ SQ RK+L
Sbjct: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           RPK HG+RVRSGR LVYGKHRRKS EV N   EI S G +GSSKFVH+E +Y+RGRQ+
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

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BLAST of MS004526 vs. ExPASy TrEMBL
Match: A0A0A0L1V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.5e-92
Identity = 179/238 (75.21%), Postives = 204/238 (85.71%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANLLK+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLLKMGMV 60

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
            ILS FV+LLLYLLHKIGIF CI RGLCRM WTC+ASYFYAW+YCC FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFRCIGRGLCRMIWTCLASYFYAWEYCCGFMCIKLASVKRTR 120

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RR  RRRD+EEEFE E GK R+ S+SDS++V E +E +SS+R S+RWR NHR SQ RK+L
Sbjct: 121 RRHVRRRDMEEEFEIEEGKCRHESTSDSTNVLEHVESKSSRRVSQRWRRNHRDSQRRKSL 180

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           RPK HG+RVRSGR LVYGKHRRKS EV N L EI S G +GSSK+VH+E +Y+RGR +
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

[Close]

BLAST of MS004526 vs. ExPASy TrEMBL
Match: A0A6J1FIX0 (uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC111445893 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.2e-77
Identity = 166/238 (69.75%), Postives = 185/238 (77.73%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+ASG F A+ K+F SPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLK+GMV
Sbjct: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
           +IL+ FV+LLLYL HKIGIFGCI RGLCRM WTC+ASY +AW+YCCTFMCIKL SVKRT 
Sbjct: 68  VILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRT- 127

Query: 121 RRRRRRRDLEEEFES-EGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKA 180
           RRR RRRDLEEE ES E  K+RYGSSSDSS+  ++IE R S+R SR+ R +HRGSQ  K 
Sbjct: 128 RRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRGSQTSKT 187

Query: 181 LRPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQ 238
           LRP SHGIRVRSGR LVY K                    HGSSK V +E  Y+RGRQ
Sbjct: 188 LRPPSHGIRVRSGRVLVYSK--------------------HGSSKIVQKERNYRRGRQ 224

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BLAST of MS004526 vs. ExPASy TrEMBL
Match: A0A6J1IVE5 (uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.5e-77
Identity = 164/239 (68.62%), Postives = 185/239 (77.41%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNVASS+ASG F A+ K+F SPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLK+GMV
Sbjct: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
           +IL+ FV+LLLYL HKIGIFGCI RG CRM WTC+ASY +AW+YCCTFMC+KL SVKRT 
Sbjct: 68  VILAYFVLLLLYLFHKIGIFGCIGRGFCRMIWTCLASYCHAWEYCCTFMCVKLASVKRT- 127

Query: 121 RRRRRRRDLEEEFES-EGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKA 180
           RR  RRRDLEEE ES E  KHRYGSS DSS+  E+IE R S+R SR+ R +HRGSQ  K 
Sbjct: 128 RRCHRRRDLEEELESEEEAKHRYGSSCDSSNDSEKIESRRSERVSRKRRRSHRGSQTSKT 187

Query: 181 LRPKSHGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 239
           LRP SHGIRVRSGR LVY K                    HGSSKFV ++ +Y+RGRQ+
Sbjct: 188 LRPTSHGIRVRSGRVLVYSK--------------------HGSSKFVQKKRKYRRGRQR 225

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BLAST of MS004526 vs. TAIR 10
Match: AT1G21722.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-35
Identity = 94/230 (40.87%), Postives = 131/230 (56.96%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGNV  S  +GF  ++G  F SPLDFLSGKSCSSVC S WDFICY+ENFCVANL K  ++
Sbjct: 1   MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICYVENFCVANLAKTALI 60

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
           LILS F +  +Y+L+K+G + CI  G  ++ W  ++ +FY   YCC+F C  L   KR R
Sbjct: 61  LILSYFFLFFIYMLYKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKR-R 120

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 180
           RRRR  R +EE+++            D+S   + ++   S    R  R   +  ++RK+L
Sbjct: 121 RRRRHNRYIEEDYD------------DNSDDDDDVDDDGSFTYHRSKRECRKEERLRKSL 180

Query: 181 RPKSHGIRVRSGRTLVYGKHRRKS--SEVVNRLGEIHSLGRHGSSKFVHE 229
           RP++H +RV      V   HR  S  S+  +    IH +     SKF  +
Sbjct: 181 RPRNHRVRVG-----VRKDHRSDSGLSQHADGGSPIHGVRVSRESKFARK 212

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BLAST of MS004526 vs. TAIR 10
Match: AT1G78922.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16
Identity = 66/210 (31.43%), Postives = 107/210 (50.95%), Query Frame = 0


Query: 1   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 60
           MGN     ++     +G +F +PL    G+SC  VC   WD  C+IE+FC+ ++ KL ++
Sbjct: 1   MGNAIGKASNDIGGFIGNIFTAPLKATLGRSCLDVCSGPWDLECFIEHFCLPDIAKLVLM 60

Query: 61  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 120
             L   +++ + LL K+GI  C+ + +C+M+    A+Y++      + +C  L ++ R  
Sbjct: 61  SSLCFIILMFITLLFKLGICQCVVKSICKMSCAACAAYWFDIGEMISCLCHSLTNINRVN 120

Query: 121 RRRRRRRDLEEEFESEGGKHRYGSSSDSSS--VPERIE-LRSSQRASR---RWRMNHRGS 180
           RRR+R  D+      E   + Y S  +SSS   P RI+ +R  QR  R   +   +H GS
Sbjct: 121 RRRKRLDDI------EATTYDYPSDDESSSSDSPSRIDNIRPKQRRRRLGSKHSHHHHGS 180

Query: 181 QM--RKALRPKSHGIRVRSGRTLVYGKHRR 203
               R+ +R  S  + VR G     GK RR
Sbjct: 181 NRNNRRLIRLPSRQLSVRVG-----GKSRR 199

The following BLAST results are available for this feature:

BLAST of MS004526 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154011.1	8.5e-125	99.16	uncharacterized protein LOC111021352 [Momordica charantia]	[more]
XP_038897053.1	1.7e-96	77.73	uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida]	[more]
XP_008444189.1	1.3e-93	76.47	PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED...	[more]
XP_004142706.1	7.3e-92	75.21	protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 protein HAPLESS 2...	[more]
KAG6608041.1	1.7e-80	71.01	Protein HAPLESS 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS004526 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS004526 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMF3	4.1e-125	99.16	uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A1S4DVV8	6.4e-94	76.47	protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1	[more]
A0A0A0L1V0	3.5e-92	75.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1	[more]
A0A6J1FIX0	3.2e-77	69.75	uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC1114458...	[more]
A0A6J1IVE5	5.5e-77	68.62	uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312...	[more]

BLAST of MS004526 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21722.1	1.8e-35	40.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G78922.1	3.1e-16	31.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..155
None	No IPR available	PANTHER	PTHR35278:SF1	F8K7.16	coord: 1..234
None	No IPR available	PANTHER	PTHR35278	TRANSMEMBRANE PROTEIN-RELATED	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004526.1	MS004526.1	mRNA