MS004374 (gene) Bitter gourd (TR) v1

Overview


Name	MS004374
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	U4/U6 small nuclear ribonucleoprotein Prp3
Location	scaffold92: 2410453 .. 2415481 (-)
RNA-Seq Expression	MS004374
Synteny	MS004374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGGGTTTCCGAGAAGGAGAAATCCAGCAAGCGTTCTCGAGATGAACGCGATCGAGACCAGAAGCATCGCAGTCGAGACGCCGACGAAAAGCATTCCTCCAAGGATGAGAAGCACCGTGAATCCGATCACCACCATCGCCGGCGTCACCACCGATCGGACCGCGATTCCAAGCTCGAGCGTTCGCATGAGCCGCGAGACCACAAACATAGGCGTGATAGGTCTCCTGACGAGCACGAGAGCTCGCAGGACCACGATTTTAAGCGGGAAAGGTCTTATGATCTTAGGGATGAGAGAGAAAGGAGTAGGGATAGGGATTCGTCTAAGCGAGAGCGGTCGAATGAGCCGAGAGTGGAGAGAGAGGGCAGCAAAGAGCGGGGCAAGCTGCGCGAGGCGAGGCGCGAGCAATCAGATGATGAGTGTGAACAGGAAGGATCGTTTGAGCCAATTCAGAATACTGTGCGTTCGAACAAGAGGAAGGATAGAGGGGGGAGTGAGGATAGGTTTGATGGTGGTGAGAAGAGGGCTAGGGCCTCGGAAGATGGGAAGGATCTAAGGCGGATTGAGGACGGGAAGGAAGTGAACGGAGCTGAGATGGATGAGAAAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGATGATGAAGCAAACTTGAGTGGTAGGGGAAGGAGGGAGAGGAAGCGGTTTGAGGATCGGGTAAACGAAGAGGATAATGGTGGAAATGTTGATGAGAAGCATGCCAATGTGAATAAACACAAGTCTAAGGGAAACGTGGGGGATGGGAAAATTCAGATTGGAGGCACCACCGATGTAAGTTCACTGGGGAATGTAAGTTCTATTTTGCATATGCTGCATTTTATTGTAATGATTTCTTCCTACAATATTGGAATTTGTTTGTAAAACCATTTAATTGTTTATCATCATCATTTACTAAGAAATCGGGTTCTCTCTCATACATGCTTTGCACTGTGCTATACTTTACGTTTCAGTTGGCTATTTAATAAAGTTCCATTTTGTCTTCAAATCGTCAATGGTGAAAGTGTCTCTTGTTTCTAAAAGAAAATTAAATTAAGCAACAAACGAAGTACATTTGAGGAGGGTTCGAGAGTTCCTCTATCTTTATTAAACATATCAATGTTATGTTTTAAGTGACTCACTTCTGCTGTCTACAGTTGTTTCTTCCCTTAGGCTTAGGTAACTACATGGGCGTGTGTCCATGCTTATATTTCTTCTTACTAATTTCCCCCTCTGAACACGTATAAATTCCCTCTCTATCCTCTTTATTTGATCTTCTCGTGTAAATGTATCTATAGGGAGACCCATCAGATCATAAGAGTAATTGAGTCCTTATCTTCTAGGACTTACAGTAAACTTATATATATATTTTTAATGTGATTGTGTGATCTCTTGGGTTGACATTTCCTTTCTGGGTGGGGGGTTTTTTCTGTTCACAAAAACTCATATCTCTGTGAACAATTGAAGCCTTAGAATTGTCATCGGCAGCATGTTTATTTTAAGCGTTTAGTTTTGGGTAAACTAGGCTTACTATAGTATTATTGTAATGCAATGTGCTGGTTAGATGAGTGTGGGCTCAAGAATTTTATTTGATAAGTTATGCAAATTAAAGCTACACCAGAACAGATTTTCCAAGGTTCAGTGATTATATTTTATTGAAAACAAGAAAAATTAATATTGAAGCAAGGTTTTTTATTAGGTCTTTGGTATATTATGCATTTTTAAAATGTTCTAGCCTTTTAATTTTGAAGTGTGAGTGACTAGTGAGGCTCCGTGTTATTTGATGCTTATTGGATGTAATAGGGGACACATTTTTAAAATTAATTGTTTGGTTTGTAACACTACAGATTCCGTATTGTAATTCTGCGACATTTGTTGTTACCTTGTTCAGATTTATATTGGTATTATGTCTAGATTTATTAATTATACATTATTGATTTTTCTTCCATGATTGTCATGCCTCCTGGCCGTGGCTAGTAGTGGACTTAAGGAACTGACATCATTATATTGCAGGGATCCACGGTGGAACCTATTGATATGTCATCAGCAAGTGTGCCCCAGAGTTTGGTACACCCTAGTCATTCCATTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGCCATCATCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTCTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGGTATGTTTGAAAGCAACGTTCCTTTGACCCATTTTAGCTATTTTCACCACCCTCTGATGTTTGTTTTACATATATATGTATTCACATATGTTTGTGAGTGTGTATTGGGTATTTCTCTGTGTATCAAGTGTGTATTTGATCTTATAGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACCACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATGCACATGGCGGTGGTATTAACGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGACCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTTGAAATGAACTTATACTCCTTTAAATTTTTTTTTATTTTATTAAATTTTAATGGATTAACCGTGTATGTATTTTTAACTTTGCAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTTTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGGTACTTATAGTTTCAATCAAACTTTCTTTTTGTAAAAGAAGGGCTGTCTAATTTATTTTAATTTTCTCATTACAGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGTAGGTTTTATATCTTTTCTATTCTTATACTTCTGAGTACTTGTTTAGTTTGCCACTTTTGGATCGTGAAAGCAATGGTATGATTGAACGATTTGAACATATTGACTTGGTGAATGCAAAACTTATATTAGATTTTTATCTTAGAAACTTTAGGAACTCAATTAAATTTACATCTTCTCGTTAGGAGGAATACAATATCTTACCCCATCATCAAAAGCCCGAATAGCAACTACATTTGATAACATTTACCGACAACAACCTAAATTCTTTTTAGTACACCAAGAGGCCACAGAATATTTGATGATCTCTGCTCTTTCCTCCAACTTAGATGTTTATTCTTAATAATCCTGAGACTTAAGTTAAATCCTATAAAGTTTTTCTTAGTAAAAAAAAATCCTATAAAGTTGCTTTGACCCCATGTTCCATAATATTTTAGCACTTTGTCGTTGATCTTTTTTTAATTGGAGTGGTTTGTGTGTGTGTGGAAATTTGTTTTCAAGTACGAAGTTCGAATGTCTTTTTCTTTTATCATTTATGTGCCCGTTTGGTACTAGGTTTGCATAGTAGTGGCATGTCTGGGGTAGAATGCCTGAAATTAAGATGTTTGGGAACAAAGTATTTCTGTGCTTTGGTATTATGACATAATGAAGTGTTGGATCTGACTGGGATCTCGTCTGAGTTCAATGCTAATATTCTATTATTTTCTTTTTAACTATTTAGGGATGTCTCTCTTTTGCATTCTGGCATGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATA

mRNA sequence

ATGGATAGGGTTTCCGAGAAGGAGAAATCCAGCAAGCGTTCTCGAGATGAACGCGATCGAGACCAGAAGCATCGCAGTCGAGACGCCGACGAAAAGCATTCCTCCAAGGATGAGAAGCACCGTGAATCCGATCACCACCATCGCCGGCGTCACCACCGATCGGACCGCGATTCCAAGCTCGAGCGTTCGCATGAGCCGCGAGACCACAAACATAGGCGTGATAGGTCTCCTGACGAGCACGAGAGCTCGCAGGACCACGATTTTAAGCGGGAAAGGTCTTATGATCTTAGGGATGAGAGAGAAAGGAGTAGGGATAGGGATTCGTCTAAGCGAGAGCGGTCGAATGAGCCGAGAGTGGAGAGAGAGGGCAGCAAAGAGCGGGGCAAGCTGCGCGAGGCGAGGCGCGAGCAATCAGATGATGAGTGTGAACAGGAAGGATCGTTTGAGCCAATTCAGAATACTGTGCGTTCGAACAAGAGGAAGGATAGAGGGGGGAGTGAGGATAGGTTTGATGGTGGTGAGAAGAGGGCTAGGGCCTCGGAAGATGGGAAGGATCTAAGGCGGATTGAGGACGGGAAGGAAGTGAACGGAGCTGAGATGGATGAGAAAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGATGATGAAGCAAACTTGAGTGGTAGGGGAAGGAGGGAGAGGAAGCGGTTTGAGGATCGGGTAAACGAAGAGGATAATGGTGGAAATGTTGATGAGAAGCATGCCAATGTGAATAAACACAAGTCTAAGGGAAACGTGGGGGATGGGAAAATTCAGATTGGAGGCACCACCGATGTAAGTTCACTGGGGAATGGATCCACGGTGGAACCTATTGATATGTCATCAGCAAGTGTGCCCCAGAGTTTGGTACACCCTAGTCATTCCATTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGCCATCATCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTCTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACCACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATGCACATGGCGGTGGTATTAACGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGACCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTTTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGGATGTCTCTCTTTTGCATTCTGGCATGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATA

Coding sequence (CDS)

ATGGATAGGGTTTCCGAGAAGGAGAAATCCAGCAAGCGTTCTCGAGATGAACGCGATCGAGACCAGAAGCATCGCAGTCGAGACGCCGACGAAAAGCATTCCTCCAAGGATGAGAAGCACCGTGAATCCGATCACCACCATCGCCGGCGTCACCACCGATCGGACCGCGATTCCAAGCTCGAGCGTTCGCATGAGCCGCGAGACCACAAACATAGGCGTGATAGGTCTCCTGACGAGCACGAGAGCTCGCAGGACCACGATTTTAAGCGGGAAAGGTCTTATGATCTTAGGGATGAGAGAGAAAGGAGTAGGGATAGGGATTCGTCTAAGCGAGAGCGGTCGAATGAGCCGAGAGTGGAGAGAGAGGGCAGCAAAGAGCGGGGCAAGCTGCGCGAGGCGAGGCGCGAGCAATCAGATGATGAGTGTGAACAGGAAGGATCGTTTGAGCCAATTCAGAATACTGTGCGTTCGAACAAGAGGAAGGATAGAGGGGGGAGTGAGGATAGGTTTGATGGTGGTGAGAAGAGGGCTAGGGCCTCGGAAGATGGGAAGGATCTAAGGCGGATTGAGGACGGGAAGGAAGTGAACGGAGCTGAGATGGATGAGAAAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGATGATGAAGCAAACTTGAGTGGTAGGGGAAGGAGGGAGAGGAAGCGGTTTGAGGATCGGGTAAACGAAGAGGATAATGGTGGAAATGTTGATGAGAAGCATGCCAATGTGAATAAACACAAGTCTAAGGGAAACGTGGGGGATGGGAAAATTCAGATTGGAGGCACCACCGATGTAAGTTCACTGGGGAATGGATCCACGGTGGAACCTATTGATATGTCATCAGCAAGTGTGCCCCAGAGTTTGGTACACCCTAGTCATTCCATTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGCCATCATCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTCTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACCACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATGCACATGGCGGTGGTATTAACGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGACCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTTTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGGATGTCTCTCTTTTGCATTCTGGCATGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATA

Protein sequence

MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKLERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVEREGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARASEDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDNGGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPSHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI

Homology

[Close]

BLAST of MS004374 vs. NCBI nr
Match: XP_022139030.1 (protein RDM16 isoform X1 [Momordica charantia])

HSP 1 Score: 1712.2 bits (4433), Expect = 0.0e+00
Identity = 926/933 (99.25%), Postives = 927/933 (99.36%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEP DHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGSKERGKLREARREQSDDECE+EGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
           EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFED VNEEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS 300
           GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS 300

Query: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360
           HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM
Sbjct: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360

Query: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420
           QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS
Sbjct: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420

Query: 421 SSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480
           SSTLPAATN HGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA
Sbjct: 421 SSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480

Query: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540
           TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE
Sbjct: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540

Query: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600
           LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR
Sbjct: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600

Query: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFV 660
           EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSG YDDVGDGFV
Sbjct: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFV 660

Query: 661 ANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720
           ANDKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 661 ANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720

Query: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE
Sbjct: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780

Query: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840
           RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840

Query: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900
           VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI
Sbjct: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900

Query: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of MS004374 vs. NCBI nr
Match: XP_022139031.1 (protein RDM16 isoform X2 [Momordica charantia])

HSP 1 Score: 1695.2 bits (4389), Expect = 0.0e+00
Identity = 920/933 (98.61%), Postives = 921/933 (98.71%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEP DHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGSKERGKLREARREQSDDECE+EGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
           EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFED VNEEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS 300
           GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD      GSTVEPIDMSSASVPQSLVHPS
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD------GSTVEPIDMSSASVPQSLVHPS 300

Query: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360
           HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM
Sbjct: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360

Query: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420
           QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS
Sbjct: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420

Query: 421 SSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480
           SSTLPAATN HGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA
Sbjct: 421 SSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480

Query: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540
           TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE
Sbjct: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540

Query: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600
           LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR
Sbjct: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600

Query: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFV 660
           EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSG YDDVGDGFV
Sbjct: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFV 660

Query: 661 ANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720
           ANDKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 661 ANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720

Query: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE
Sbjct: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780

Query: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840
           RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840

Query: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900
           VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI
Sbjct: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900

Query: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

[Close]

BLAST of MS004374 vs. NCBI nr
Match: XP_038893249.1 (protein RDM16 isoform X1 [Benincasa hispida])

HSP 1 Score: 1515.0 bits (3921), Expect = 0.0e+00
Identity = 834/934 (89.29%), Postives = 873/934 (93.47%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDR+SEKEKSSKRSR+ERDRD KHRSRD +EKH SKDEKHRESDHHHRRRHHRSDRDSK 
Sbjct: 1   MDRLSEKEKSSKRSREERDRDHKHRSRDTEEKHFSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEPR+HKHRRDRSPDE  SSQD DFKRERS+DLR+ERERSRDRDSSKRERSNEPR  
Sbjct: 61  ERSHEPREHKHRRDRSPDERGSSQDRDFKRERSHDLREERERSRDRDSSKRERSNEPRGL 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           R GS+ERGKLRE RREQS+DE E+EGS EPI N+V SNKRK RGGSEDRFDGGEKRARAS
Sbjct: 121 RAGSEERGKLREVRREQSEDEREREGSLEPIHNSVGSNKRKKRGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
                    E G EVNGAEMDEKKERRRFAD EKD+EANLSGRGRRERKRFEDRV EEDN
Sbjct: 181 ---------EGGNEVNGAEMDEKKERRRFADSEKDEEANLSGRGRRERKRFEDRVKEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD-VSSLGNGSTVEPIDMSSASVPQSLVHP 300
           GGNVDE+HA VN+ KSKG+VGD K+Q GGTTD   SLGNGS VEP DMSS SVPQ+L+HP
Sbjct: 241 GGNVDERHAKVNELKSKGDVGDVKVQFGGTTDEKGSLGNGSMVEPTDMSSTSVPQNLIHP 300

Query: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360
           SHS+PIKVSSISTTNENKGVSITRSHEVHGKSSTDG S+TAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SHSLPIKVSSISTTNENKGVSITRSHEVHGKSSTDGTSATAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420
           MQKELAEKLKKIPLMKK GGSSSASSSV+KLE+K KP  GVLG  PTTN  T++S GVAS
Sbjct: 361 MQKELAEKLKKIPLMKKVGGSSSASSSVMKLEEKPKPPAGVLGQLPTTNDATSLSTGVAS 420

Query: 421 SSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480
           SSSTLP+A NA  GGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 421 SSSTLPSAANALDGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKL+SKFGEAQAKER
Sbjct: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLKSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGF 660
           +EKQAQLAKAKAAPDINPNLIEVSERV +KEKTKEPIPEIEWWDV LLHSG Y+DVGDGF
Sbjct: 601 KEKQAQLAKAKAAPDINPNLIEVSERV-MKEKTKEPIPEIEWWDVPLLHSGTYEDVGDGF 660

Query: 661 VANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA+DK+RKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VADDKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEE +E+DD+PVNKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEE-EENDDRPVNKCSLVWQGSVAKSSFNRFS 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           IQECMTEAAARKIFADAGVGHYWD AVN+SDDQI
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDFAVNYSDDQI 923

[Close]

BLAST of MS004374 vs. NCBI nr
Match: XP_004143591.1 (protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_000308 [Cucumis sativus])

HSP 1 Score: 1503.8 bits (3892), Expect = 0.0e+00
Identity = 825/934 (88.33%), Postives = 871/934 (93.25%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEPR+HKHRRD SPDE ESSQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E E+EGSFEPIQN+VR NKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
                    E G EVNGAEMDEKKERRRFADGEKD+ ANLSGRGRR+RKRFEDR  EEDN
Sbjct: 181 ---------EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVHP 300
           GGNVDEKH  VN++KSKG+VGDGK+Q GGTTD   SLGNGS VEP DM SASVPQ+L+HP
Sbjct: 241 GGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHP 300

Query: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360
           SHS+PIKVSSISTTNEN+GVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420
           MQKELAEKLK+IPLMKK GGSSSA+SSVVKLE+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 420

Query: 421 SSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480
           SSSTLP+A NA  GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 421 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 480

Query: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGF 660
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 601 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 660

Query: 661 VANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA+DK+RKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of MS004374 vs. NCBI nr
Match: XP_008461606.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa])

HSP 1 Score: 1501.5 bits (3886), Expect = 0.0e+00
Identity = 828/934 (88.65%), Postives = 870/934 (93.15%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEPR+HKHRRDRSPDE E SQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E E+EGSFEPIQN+VRSNKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
                    E G EVNGAEMDEKKERRRFADGEKDD ANLSGR RR+RKRFEDRV EEDN
Sbjct: 181 ---------EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVHP 300
           GGNVDEKHA V ++KSKG+VGDGK+Q GGTTD   SLGNGS VEP D+ SASVPQ+L+HP
Sbjct: 241 GGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHP 300

Query: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360
           S S+PIKVSSISTTNENKGVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SPSLPIKVSSISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420
           MQKELAEKLKKIPLMKK GGSSSA+SSVVKLE+K+KP  GVLG   TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 420

Query: 421 SSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480
           SSST P+A NA   GINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 421 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGF 660
           +EKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LLHS  Y+D+GDGF
Sbjct: 601 KEKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGF 660

Query: 661 VANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA++K+RKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKPVNKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EETDDKPVNKCSLVWQGSVAKSSFNRFS 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           IQECMTEAAARKIFADAGVGHYWD AVNFSDDQI
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of MS004374 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 1.9e-215
Identity = 494/895 (55.20%), Postives = 598/895 (66.82%), Query Frame = 0


Query: 44  DHHHRRRHHRSDRDSKLERSHEP-RDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERER 103
           D     R HR DRD      H P R+   RRDR  D      DH ++  R  D  DER+R
Sbjct: 2   DKERYSRSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDH-YRSSRRGDREDERDR 61

Query: 104 SRDRDSSKRERSNEPRVEREGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKD 163
           ++DR    R RS E R EREGS++R K    R  +   E E              +KRKD
Sbjct: 62  TKDR----RGRSVE-RGEREGSRDREKHHHERSHEGSKEKESR------------SKRKD 121

Query: 164 RGGSEDRFDGGEKRARASEDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSG 223
           R                             +E NGA   + K++ RFADG  +       
Sbjct: 122 R-----------------------------EEENGAR--DGKKKSRFADGNGE------- 181

Query: 224 RGRRERKRFEDRVNEEDNGGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTV 283
                R RFED   E      V+ K A V++     N   G + +G +T  SS+      
Sbjct: 182 ----RRSRFEDVAIE------VENKDAQVSEGSGATNPTSG-VTMGAST-YSSI------ 241

Query: 284 EPIDMSSASVPQSLVHPSHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDG-PSSTAG 343
            P + S+A        PS ++  KVSSISTT+ENK  S+ RSHEV GKSSTDG P STAG
Sbjct: 242 -PSEASAA--------PSQTLLTKVSSISTTDENK-ASVVRSHEVPGKSSTDGRPLSTAG 301

Query: 344 K-SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPA 403
           K S NL LD+    AKA+KALQ+QK LA++LK +PL+KK    +S  S   ++       
Sbjct: 302 KSSANLPLDSSALAAKARKALQLQKGLADRLKNLPLLKKATKPTSEGSPHTRVP------ 361

Query: 404 GGVLGPSPTTNIGTTISAGVASSSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELA 463
                PS TT     +S G  S +STLP     H G     AG  SI + EAVKRAQELA
Sbjct: 362 -----PSTTT---PAVSTG-TSFASTLP-----HTG----LAGFGSIANIEAVKRAQELA 421

Query: 464 ARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPS 523
           A MGF QD EFAP+INLFPG   +D+ V Q+P K PVLR+DALGREIDE GNV+++TKPS
Sbjct: 422 ANMGFHQDREFAPVINLFPGQAPSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPS 481

Query: 524 NLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGK 583
           NLSTLKVNINK+KKDAFQILKP+LE D + NP+FD RMGI++ K+LRPKRM+FQFVEEGK
Sbjct: 482 NLSTLKVNINKKKKDAFQILKPQLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGK 541

Query: 584 WSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIP 643
           W+++AE +K +S FGEA+AKE + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP
Sbjct: 542 WTRDAENLKFKSHFGEAKAKELKVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIP 601

Query: 644 EIEWWDVSLLHSGMYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLT 703
           ++EWWD ++L +G Y ++ DG +    ++ +K+T Y+EHPRPIEPPAE APPPPQPLKLT
Sbjct: 602 DVEWWDANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLT 661

Query: 704 KKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIR 763
           KKEQKKLRTQRRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR
Sbjct: 662 KKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIR 721

Query: 764 AAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKV 823
            AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++E  VSVYKI  LSHP+ RFKV
Sbjct: 722 TAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKV 781

Query: 824 DVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEEEEADESDD 883
           ++NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW  A  KE  E +E + 
Sbjct: 782 EMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEV 786

Query: 884 KPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDD 932
              NKC LVWQGS+ K SF++F + EC+TE+ A+K+F DAGV HYWDLAVN+SDD
Sbjct: 842 NGGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of MS004374 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 6.4e-70
Identity = 216/629 (34.34%), Postives = 330/629 (52.46%), Query Frame = 0


Query: 328 HGKSSTDGP-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 387
           H KS++D           G    +S ++    K+ +   +E+ ++ + IP        ++
Sbjct: 78  HSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVEDEPEVIPGPPSESPGML 137

Query: 388 KKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNAHGGG 447
            K        ++  ++E++ K    +  P+P   I +      +S S  LP         
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISS------SSQSERLPIGNTVQPS- 197

Query: 448 INVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVP 507
               A        E  ++A EL AR+        G   +     L NL    IA      
Sbjct: 198 ---QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVEL 257

Query: 508 QKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDP 567
           +   K   L LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D 
Sbjct: 258 KDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDM 317

Query: 568 ESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQ 627
           ESN +FD R+ I  T   R KR  F+F E+GK+ K A+  +LR+K   AQ K+ + + +Q
Sbjct: 318 ESNTYFDLRVSI--TPAQRQKR-TFKFHEKGKFEKIAQ--RLRTK---AQLKKLQAEISQ 377

Query: 628 LAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFVANDKI 687
            A+ K     +  L  ++ +   KE  +  IPEIEWWD  ++ +G+  D+  G  ++ K 
Sbjct: 378 AAR-KTGIHTSTKLALITPK---KELKEGEIPEIEWWDSYIIPNGL--DLKGG-TSSKKD 437

Query: 688 RKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLI 747
               IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+
Sbjct: 438 EYFGITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLM 497

Query: 748 EPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKK 807
            PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK
Sbjct: 498 PPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKK 557

Query: 808 ERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGS 867
            +KL +D  S    ++VY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG 
Sbjct: 558 IKKLKEDV-SQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGP 617

Query: 868 KSIKRYGKLMLRRINWAASV-----KEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 927
           K+ K++ +LML RI W         ++++E+DE   K  NKCSLVW+G+    SF +   
Sbjct: 618 KAQKKFKRLMLHRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKF 677

Query: 928 QECMTEAAARKIFADAGVGHYWDLAVNFS 930
           ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 678 KQCPTENMAREHFKKHGAEHYWDLALSES 678

[Close]

BLAST of MS004374 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 260.0 bits (663), Expect = 1.0e-67
Identity = 212/632 (33.54%), Postives = 322/632 (50.95%), Query Frame = 0


Query: 328 HGKSSTDGP-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 387
           H KSS+D           G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 388 KKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNAHGGG 447
            K        ++  ++E++ K    +  P+P     +      +S    LP      G  
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPS------SSQPERLPI-----GNT 197

Query: 448 INVPAGLTSI-PHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAV 507
           I      T +    E  ++A EL AR+        G   +     L NL    IA     
Sbjct: 198 IQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVE 257

Query: 508 PQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVD 567
            +   K   L LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D
Sbjct: 258 LKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSED 317

Query: 568 PESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQA 627
            ESN  FD R+ I  +   + +R  F+F ++GK+ K A+ ++ +++  + QA      + 
Sbjct: 318 MESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EI 377

Query: 628 QLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFVANDK 687
             A  K     +  L  ++ +   KE  +  IPEIEWWD  ++ +G      D    N K
Sbjct: 378 SQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSYIIPNGF-----DLTEENPK 437

Query: 688 IRKD--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ 747
            R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R 
Sbjct: 438 -REDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRL 497

Query: 748 GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERR 807
           GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+
Sbjct: 498 GLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRK 557

Query: 808 EKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVE 867
            KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVE
Sbjct: 558 VKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVE 617

Query: 868 GGSKSIKRYGKLMLRRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNK 927
           GG K+ K++ +LML RI W          ++EE+DE   K  NKC LVW+G+    SF +
Sbjct: 618 GGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGE 677

Query: 928 FFIQECMTEAAARKIFADAGVGHYWDLAVNFS 930
              ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 678 MKFKQCPTENMAREHFKKHGAEHYWDLALSES 677

[Close]

BLAST of MS004374 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.0e-67
Identity = 212/632 (33.54%), Postives = 322/632 (50.95%), Query Frame = 0


Query: 328 HGKSSTDGP-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 387
           H KSS+D           G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 388 KKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNAHGGG 447
            K        ++  ++E++ K    +  P+P     +      +S    LP      G  
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPS------SSQPERLPI-----GNT 197

Query: 448 INVPAGLTSI-PHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAV 507
           I      T +    E  ++A EL AR+        G   +     L NL    IA     
Sbjct: 198 IQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVE 257

Query: 508 PQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVD 567
            +   K   L LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D
Sbjct: 258 LKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFRQQLKEKPSED 317

Query: 568 PESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQA 627
            ESN  FD R+ I  +   + +R  F+F ++GK+ K A+ ++ +++  + QA      + 
Sbjct: 318 MESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EI 377

Query: 628 QLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFVANDK 687
             A  K     +  L  ++ +   KE  +  IPEIEWWD  ++ +G      D    N K
Sbjct: 378 SQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSYIIPNGF-----DLTEENPK 437

Query: 688 IRKD--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ 747
            R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R 
Sbjct: 438 -REDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRL 497

Query: 748 GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERR 807
           GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+
Sbjct: 498 GLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRK 557

Query: 808 EKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVE 867
            KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVE
Sbjct: 558 VKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVE 617

Query: 868 GGSKSIKRYGKLMLRRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNK 927
           GG K+ K++ +LML RI W          ++EE+DE   K  NKC LVW+G+    SF +
Sbjct: 618 GGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGE 677

Query: 928 FFIQECMTEAAARKIFADAGVGHYWDLAVNFS 930
              ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 678 MKFKQCPTENMAREHFKKHGAEHYWDLALSES 677

[Close]

BLAST of MS004374 vs. ExPASy Swiss-Prot
Match: Q922U1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.3e-67
Identity = 213/632 (33.70%), Postives = 321/632 (50.79%), Query Frame = 0


Query: 328 HGKSSTDGP-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 387
           H KSS+D           G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 388 KKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNAHGGG 447
            K        ++  ++E++ K    +  P+P     +      +S    LP      G  
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQLSFISPPAPQPKTPS------SSQPERLPI-----GNT 197

Query: 448 INVPAGLTSI-PHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAV 507
           I      T +    E  ++A EL AR+        G   +     L NL    IA     
Sbjct: 198 IQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVE 257

Query: 508 PQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVD 567
            +   K   L LD  GR +D  G  V +T    + TLK NI   K++ F Q LK +   D
Sbjct: 258 LKDQTKPTPLILDEQGRTVDATGKEVELT--HRMPTLKANIRAVKREQFKQQLKEKPSED 317

Query: 568 PESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQA 627
            ESN  FD R+ I  +   + +R  F+F ++GK+ K A+ ++ +++  + QA      + 
Sbjct: 318 MESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EI 377

Query: 628 QLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFVANDK 687
             A  K     +  L  ++ +   KE  +  IPEIEWWD  ++ +G      D    N K
Sbjct: 378 SQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSYIIPNGF-----DLTEENPK 437

Query: 688 IRKD--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ 747
            R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R 
Sbjct: 438 -REDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRL 497

Query: 748 GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERR 807
           GL  PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+
Sbjct: 498 GLTPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRK 557

Query: 808 EKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVE 867
            KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVE
Sbjct: 558 VKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVE 617

Query: 868 GGSKSIKRYGKLMLRRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNK 927
           GG K+ K++ +LML RI W          ++EE+DE   K  NKC LVW+G+    SF +
Sbjct: 618 GGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGE 677

Query: 928 FFIQECMTEAAARKIFADAGVGHYWDLAVNFS 930
              ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 678 MKFKQCPTENMAREHFKKHGAEHYWDLALSES 677

[Close]

BLAST of MS004374 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1712.2 bits (4433), Expect = 0.0e+00
Identity = 926/933 (99.25%), Postives = 927/933 (99.36%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEP DHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGSKERGKLREARREQSDDECE+EGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
           EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFED VNEEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS 300
           GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS 300

Query: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360
           HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM
Sbjct: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360

Query: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420
           QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS
Sbjct: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420

Query: 421 SSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480
           SSTLPAATN HGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA
Sbjct: 421 SSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480

Query: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540
           TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE
Sbjct: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540

Query: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600
           LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR
Sbjct: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600

Query: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFV 660
           EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSG YDDVGDGFV
Sbjct: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFV 660

Query: 661 ANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720
           ANDKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 661 ANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720

Query: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE
Sbjct: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780

Query: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840
           RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840

Query: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900
           VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI
Sbjct: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900

Query: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of MS004374 vs. ExPASy TrEMBL
Match: A0A6J1CBF9 (protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1695.2 bits (4389), Expect = 0.0e+00
Identity = 920/933 (98.61%), Postives = 921/933 (98.71%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEP DHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGSKERGKLREARREQSDDECE+EGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
           EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFED VNEEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTVEPIDMSSASVPQSLVHPS 300
           GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD      GSTVEPIDMSSASVPQSLVHPS
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD------GSTVEPIDMSSASVPQSLVHPS 300

Query: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360
           HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM
Sbjct: 301 HSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQM 360

Query: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420
           QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS
Sbjct: 361 QKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASS 420

Query: 421 SSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480
           SSTLPAATN HGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA
Sbjct: 421 SSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA 480

Query: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540
           TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE
Sbjct: 481 TDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPE 540

Query: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600
           LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR
Sbjct: 541 LEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERR 600

Query: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGFV 660
           EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSG YDDVGDGFV
Sbjct: 601 EKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFV 660

Query: 661 ANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720
           ANDKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 661 ANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 720

Query: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE
Sbjct: 721 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 780

Query: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840
           RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 781 RREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 840

Query: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900
           VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI
Sbjct: 841 VEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFI 900

Query: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 901 QECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

[Close]

BLAST of MS004374 vs. ExPASy TrEMBL
Match: A0A0A0KLQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1)

HSP 1 Score: 1503.8 bits (3892), Expect = 0.0e+00
Identity = 825/934 (88.33%), Postives = 871/934 (93.25%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEPR+HKHRRD SPDE ESSQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E E+EGSFEPIQN+VR NKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
                    E G EVNGAEMDEKKERRRFADGEKD+ ANLSGRGRR+RKRFEDR  EEDN
Sbjct: 181 ---------EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVHP 300
           GGNVDEKH  VN++KSKG+VGDGK+Q GGTTD   SLGNGS VEP DM SASVPQ+L+HP
Sbjct: 241 GGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHP 300

Query: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360
           SHS+PIKVSSISTTNEN+GVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420
           MQKELAEKLK+IPLMKK GGSSSA+SSVVKLE+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 420

Query: 421 SSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480
           SSSTLP+A NA  GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 421 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 480

Query: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGF 660
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 601 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 660

Query: 661 VANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA+DK+RKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of MS004374 vs. ExPASy TrEMBL
Match: A0A5A7SXX5 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00020 PE=4 SV=1)

HSP 1 Score: 1501.5 bits (3886), Expect = 0.0e+00
Identity = 828/934 (88.65%), Postives = 870/934 (93.15%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEPR+HKHRRDRSPDE E SQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E E+EGSFEPIQN+VRSNKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
                    E G EVNGAEMDEKKERRRFADGEKDD ANLSGR RR+RKRFEDRV EEDN
Sbjct: 181 ---------EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVHP 300
           GGNVDEKHA V ++KSKG+VGDGK+Q GGTTD   SLGNGS VEP D+ SASVPQ+L+HP
Sbjct: 241 GGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHP 300

Query: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360
           S S+PIKVSSISTTNENKGVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SPSLPIKVSSISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420
           MQKELAEKLKKIPLMKK GGSSSA+SSVVKLE+K+KP  GVLG   TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 420

Query: 421 SSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480
           SSST P+A NA   GINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 421 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGF 660
           +EKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LLHS  Y+D+GDGF
Sbjct: 601 KEKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGF 660

Query: 661 VANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA++K+RKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKPVNKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EETDDKPVNKCSLVWQGSVAKSSFNRFS 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           IQECMTEAAARKIFADAGVGHYWD AVNFSDDQI
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of MS004374 vs. ExPASy TrEMBL
Match: A0A1S3CF39 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC103500170 PE=4 SV=1)

HSP 1 Score: 1501.5 bits (3886), Expect = 0.0e+00
Identity = 828/934 (88.65%), Postives = 870/934 (93.15%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKL 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPRDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120
           ERSHEPR+HKHRRDRSPDE E SQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E E+EGSFEPIQN+VRSNKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDRVNEEDN 240
                    E G EVNGAEMDEKKERRRFADGEKDD ANLSGR RR+RKRFEDRV EEDN
Sbjct: 181 ---------EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDN 240

Query: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVHP 300
           GGNVDEKHA V ++KSKG+VGDGK+Q GGTTD   SLGNGS VEP D+ SASVPQ+L+HP
Sbjct: 241 GGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHP 300

Query: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360
           S S+PIKVSSISTTNENKGVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SPSLPIKVSSISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420
           MQKELAEKLKKIPLMKK GGSSSA+SSVVKLE+K+KP  GVLG   TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 420

Query: 421 SSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480
           SSST P+A NA   GINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 421 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVGDGF 660
           +EKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LLHS  Y+D+GDGF
Sbjct: 601 KEKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGF 660

Query: 661 VANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA++K+RKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKPVNKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EETDDKPVNKCSLVWQGSVAKSSFNRFS 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 934
           IQECMTEAAARKIFADAGVGHYWD AVNFSDDQI
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of MS004374 vs. TAIR 10
Match: AT1G28060.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 750.7 bits (1937), Expect = 1.4e-216
Identity = 494/895 (55.20%), Postives = 598/895 (66.82%), Query Frame = 0


Query: 44  DHHHRRRHHRSDRDSKLERSHEP-RDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERER 103
           D     R HR DRD      H P R+   RRDR  D      DH ++  R  D  DER+R
Sbjct: 2   DKERYSRSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDH-YRSSRRGDREDERDR 61

Query: 104 SRDRDSSKRERSNEPRVEREGSKERGKLREARREQSDDECEQEGSFEPIQNTVRSNKRKD 163
           ++DR    R RS E R EREGS++R K    R  +   E E              +KRKD
Sbjct: 62  TKDR----RGRSVE-RGEREGSRDREKHHHERSHEGSKEKESR------------SKRKD 121

Query: 164 RGGSEDRFDGGEKRARASEDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSG 223
           R                             +E NGA   + K++ RFADG  +       
Sbjct: 122 R-----------------------------EEENGAR--DGKKKSRFADGNGE------- 181

Query: 224 RGRRERKRFEDRVNEEDNGGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVSSLGNGSTV 283
                R RFED   E      V+ K A V++     N   G + +G +T  SS+      
Sbjct: 182 ----RRSRFEDVAIE------VENKDAQVSEGSGATNPTSG-VTMGAST-YSSI------ 241

Query: 284 EPIDMSSASVPQSLVHPSHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDG-PSSTAG 343
            P + S+A        PS ++  KVSSISTT+ENK  S+ RSHEV GKSSTDG P STAG
Sbjct: 242 -PSEASAA--------PSQTLLTKVSSISTTDENK-ASVVRSHEVPGKSSTDGRPLSTAG 301

Query: 344 K-SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPA 403
           K S NL LD+    AKA+KALQ+QK LA++LK +PL+KK    +S  S   ++       
Sbjct: 302 KSSANLPLDSSALAAKARKALQLQKGLADRLKNLPLLKKATKPTSEGSPHTRVP------ 361

Query: 404 GGVLGPSPTTNIGTTISAGVASSSSTLPAATNAHGGGINVPAGLTSIPHFEAVKRAQELA 463
                PS TT     +S G  S +STLP     H G     AG  SI + EAVKRAQELA
Sbjct: 362 -----PSTTT---PAVSTG-TSFASTLP-----HTG----LAGFGSIANIEAVKRAQELA 421

Query: 464 ARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPS 523
           A MGF QD EFAP+INLFPG   +D+ V Q+P K PVLR+DALGREIDE GNV+++TKPS
Sbjct: 422 ANMGFHQDREFAPVINLFPGQAPSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPS 481

Query: 524 NLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGK 583
           NLSTLKVNINK+KKDAFQILKP+LE D + NP+FD RMGI++ K+LRPKRM+FQFVEEGK
Sbjct: 482 NLSTLKVNINKKKKDAFQILKPQLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGK 541

Query: 584 WSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIP 643
           W+++AE +K +S FGEA+AKE + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP
Sbjct: 542 WTRDAENLKFKSHFGEAKAKELKVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIP 601

Query: 644 EIEWWDVSLLHSGMYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLT 703
           ++EWWD ++L +G Y ++ DG +    ++ +K+T Y+EHPRPIEPPAE APPPPQPLKLT
Sbjct: 602 DVEWWDANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLT 661

Query: 704 KKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIR 763
           KKEQKKLRTQRRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR
Sbjct: 662 KKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIR 721

Query: 764 AAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKV 823
            AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++E  VSVYKI  LSHP+ RFKV
Sbjct: 722 TAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKV 781

Query: 824 DVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEEEEADESDD 883
           ++NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW  A  KE  E +E + 
Sbjct: 782 EMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEV 786

Query: 884 KPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDD 932
              NKC LVWQGS+ K SF++F + EC+TE+ A+K+F DAGV HYWDLAVN+SDD
Sbjct: 842 NGGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of MS004374 vs. TAIR 10
Match: AT3G55930.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-90
Identity = 206/450 (45.78%), Postives = 264/450 (58.67%), Query Frame = 0


Query: 488 KPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPES 547
           K  K  VLR+DALGREIDE GNV+++TKP N STL VNI                   ++
Sbjct: 91  KQTKGFVLRVDALGREIDEHGNVISVTKPINHSTLMVNIR------------------DN 150

Query: 548 NPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLA 607
            PH                                                      +L+
Sbjct: 151 VPH-----------------------------------------------------RKLS 210

Query: 608 KAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGMYDDVG--DGFVANDKI 667
           K  +                            EWWD  +L     +++      +  D I
Sbjct: 211 KILS----------------------------EWWDAKILTDDTINELSCDPNILIMDTI 270

Query: 668 RKDKITI-----YVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 727
            ++ + +     ++EHP PIEPPAE A PPPQPLK+TK+E+KKLRT RR+AKE +++EMI
Sbjct: 271 TENHLNMKVFNCHIEHPFPIEPPAEAASPPPQPLKMTKEERKKLRTLRRVAKEMEKREMI 330

Query: 728 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 787
            QG +EP K KVKMSNLMKV  SEATQ+PTKLEKEIR  AAEREQAH+DRN+ARKLTPAE
Sbjct: 331 SQGRVEPQKSKVKMSNLMKVRASEATQNPTKLEKEIRTEAAEREQAHMDRNVARKLTPAE 390

Query: 788 RREKKERKLFDDANS-LENFVSVYKI-YDLSHPQARFKVDVNARENRLTGCAVICDGISV 847
           +REKKERKLF D  + +E  VSVYKI   LS P+ RFKV +NA++N LTG +V+ DG+SV
Sbjct: 391 KREKKERKLFGDPTTVVETIVSVYKINKKLSDPKTRFKVRMNAKQNILTGFSVMMDGMSV 437

Query: 848 LVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKF 907
           +VVEG  K+I RY KLML+RINW  + K+E+E +       NKC LVWQGSV K SF++F
Sbjct: 451 VVVEGKRKAINRYEKLMLKRINWEEAEKKEDEEENGG----NKCCLVWQGSVEKPSFHRF 437

Query: 908 FIQECMTEAAARKIFADAGVGHYWDLAVNF 929
            +QEC+T++ A+K+F DAGV HYWDLA+N+
Sbjct: 511 HVQECLTKSDAKKVFNDAGVAHYWDLALNY 437

[Close]

BLAST of MS004374 vs. TAIR 10
Match: AT3G56790.1 (RNA splicing factor-related )

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-14
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 690 PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD 749
           PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Sbjct: 144 PPQPFKLTKKEEKKLQTLRRVAKEKEKQKMIRQALFEPQKSKVKLSNLMKVLASELATQD 203

HSP 2 Score: 61.6 bits (148), Expect = 3.8e-09
Identity = 46/105 (43.81%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 436 NVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVL 495
           ++ +  TS    EAVKR QEL                       A D AV  K  K   L
Sbjct: 69  SIASDTTSSQILEAVKRFQEL-----------------------AIDTAVAHKQTKGFFL 128

Query: 496 RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQ-ILKP 540
           R+D LGREIDE G+V+      NLSTL VN NK KKD FQ ILKP
Sbjct: 129 RVDVLGREIDEYGHVI------NLSTLMVNNNKHKKDVFQNILKP 144

The following BLAST results are available for this feature:

BLAST of MS004374 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139030.1	0.0e+00	99.25	protein RDM16 isoform X1 [Momordica charantia]	[more]
XP_022139031.1	0.0e+00	98.61	protein RDM16 isoform X2 [Momordica charantia]	[more]
XP_038893249.1	0.0e+00	89.29	protein RDM16 isoform X1 [Benincasa hispida]	[more]
XP_004143591.1	0.0e+00	88.33	protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_...	[more]
XP_008461606.1	0.0e+00	88.65	PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019...	[more]

BLAST of MS004374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	1.9e-215	55.20	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	6.4e-70	34.34	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
O43395	1.0e-67	33.54	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	1.0e-67	33.54	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q922U1	1.3e-67	33.70	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=...	[more]

BLAST of MS004374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CB57	0.0e+00	99.25	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBF9	0.0e+00	98.61	protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A0A0KLQ4	0.0e+00	88.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1	[more]
A0A5A7SXX5	0.0e+00	88.65	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CF39	0.0e+00	88.65	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC1035001...	[more]

BLAST of MS004374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28060.1	1.4e-216	55.20	Pre-mRNA-splicing factor 3	[more]
AT3G55930.1	1.5e-90	45.78	Pre-mRNA-splicing factor 3	[more]
AT3G56790.1	2.3e-14	75.00	RNA splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 694..716
None	No IPR available	COILS	Coil	Coil	coord: 348..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 696..716
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 374..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 678..716
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 679..695
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 71..932
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 802..925 e-value: 1.5E-40 score: 138.7
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 548..777 e-value: 4.0E-62 score: 209.8
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 71..932

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004374.1	MS004374.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex