MS004323 (gene) Bitter gourd (TR) v1

Overview


Name	MS004323
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box/LRR-repeat protein At4g29420
Location	scaffold92: 1833906 .. 1836221 (-)
RNA-Seq Expression	MS004323
Synteny	MS004323

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGATCTTCCGCCATCGATAGTTCTCGAAATCCTGAATCGATTGGCCGATTCCGCCGATTTGGCTCGGTGCCGAGTCGCATCCAAAGCTCTCAATGTTCTCTCCCGCGAGGTTAGGTCACTGAACCTCTTCTGCTCATTGGATCGCTATCTCAAGTCTAGGGCTGTGGAGACGAAGCCATTGGTGACGCCTTTCAAGGTCATATTGAAGACTCTGATGAACAATTTTCCGGCTCTCGATTCTGTGTCGATCGGTGTGGAGAGGTCACTCGGACGGATTTCTTATGAGCACGACGATGTTGAAGATTGGTCCGATGATTTGTACCTGACGGATGCTGGCTTCGCTAGGGATTGGCTGCCGGCGATCGGTGGAGATTTAACGTCCTTGTCGATCGTCGATTTTTGGGTTCAATCTTGCTGGAGACAGTCCAAGATTTTGGCGCTGATTACTTCGTGCTGTGAGTTTCTGTTTTGCCATTGAATTGCACAAAACCATAAATTTCTTCATGGAACTGTTTTTATTCATCTGAAATTCTATATGTTTCCCTGTCTGAAAGAATGAAACGTAAATGATTTTTTTTTTCCCAATTGTTGAAAACATTGAACTTGTGTGGCAGTTAATTCTGATTGATAAGAATATTCGACGGAGAAAAAGGAAAATATAAGGGATGGTGGTGAGAACGCAGAGAGGAATCTCCAAGTCTGCATGGATAAAAATTTAAATTCATCGTAGTCCATCCGAAGCTTTAAACTTCTGGTTCTACTTAAGCTTTAAACTTCATTTTTATTTTTTCATCTTGATATCGGACCAAGTAGTATCTATGTTTGAACTCATTATTGTTTCTCCAATTAATATTCTTAATCACTTTTCTTTTCTTCCGTGAGTACAATAAGATGTCGGGTATGATTCGAACCCTACAAATACTAGAATGTTAGGTTCTTCTCTTCCTTTTGTTGTAGAGTGGGCCATGGAGGTACCCGCTCACACTTTTTCTTACCGAAAATACGTTATTGTTAGCCTAAGGCAGGTTTAGCTATCCTCCCGAAGCTTTCATTTTTCAATGGTTTGATTTTTGTCTAACTCACGACCTTGAATACAAAGGAGCTTGCAGGAGGTTATCAGTGTCAAATTGAACTATGTTCGGGTTGGCATCATGATCTTGAAATCTAGTGAAATGATGTAGTTGTAATAATTTGGATGAGACTAAGAAAGAGGAGCTAGCTAATTTTCTCCAACCGGTAAAAGTGCATTGGTTTATGCTTGTAAGTTTTTTCGGACTTAAGTTCACATGGATCAGAGAAAGCACTGGTTTATGCTCGTTTGAAGTGATTTTCATTATAATCTCTGTGGCTTTTTCAATTCAAAATAGGTCCATGATCTTAAATTTTCTTGTTAATGTCCATTATTGACCTTGACTTGTTTCTCCATGTAGGTCATAATCTTCTGGAACTTGAACTGAAGAATGCTTGGTTGTCAGTGGATGGCTTGAACAAAATGAGTTCCCTCAAACGTTTGACCCTTGAATTTATAAGGTTAGATGATGAAGATCTGAGCAAGCTTAACCATAACTTCCCTCATCTTGAAGTCCTAAATTTGATAGGGGTTGGAGGCCTAAACGAACCGATAATTCATCTGTTGCACCTCGAAACCTGTCGATGGACTGTGTCAAATGCTCCGGTTTCTCTGAGCATTTGCGCACCGAGACTTTCGAGACTTGAACTCAAATGTGTCAAACCAAAATCTCTGATCATTGAAACTCCAATGCTATCTGATTTCCATCTTTCTCTGGAAGATGCAAGTGGGTTGCAAGTCAATGAATTCCCTTGCTTGAGAAAGCTTGAGCTTCATTCTCCTAGCCTCTGCAGTCTCATCACAACATTTTCACCTGCAAGAACTATCAAGGATCTCACACTAGGTACACTCCAACGCGCTGAAACCGTTGAATCCGTTAAGTTTTGCCTCGATACACTGTTTGAAACGTTTCCAAATCTTAGATTTCTTAAACTTGGCCCCGGAGTTCTGTCAGAAGTCGAAACTTATTATCGAGCTGGAGGTTCGGATGGACGGATGGGGATGAGAGATTTGAAAATGTTTCATAGTAGCCTTAAAACCTACAAGATTGAGTTGAAATTCCCTTTCATCATTTCCATTTTGGACAAATGTACCGATTCCTTCGATATGGCATTGCTGATCTATCACAATGCTGATTCTGGCTCTGGTAGTGGAATCATGTCAAAACGTTCTACTAATCATCCAAGACCAAGATGGAGATGGGAACTTTGGAAAGAAGGATCAAGAGAAGCGTGGGGTAAT

mRNA sequence

ATGGACGATCTTCCGCCATCGATAGTTCTCGAAATCCTGAATCGATTGGCCGATTCCGCCGATTTGGCTCGGTGCCGAGTCGCATCCAAAGCTCTCAATGTTCTCTCCCGCGAGGTTAGGTCACTGAACCTCTTCTGCTCATTGGATCGCTATCTCAAGTCTAGGGCTGTGGAGACGAAGCCATTGGTGACGCCTTTCAAGGTCATATTGAAGACTCTGATGAACAATTTTCCGGCTCTCGATTCTGTGTCGATCGGTGTGGAGAGGTCACTCGGACGGATTTCTTATGAGCACGACGATGTTGAAGATTGGTCCGATGATTTGTACCTGACGGATGCTGGCTTCGCTAGGGATTGGCTGCCGGCGATCGGTGGAGATTTAACGTCCTTGTCGATCGTCGATTTTTGGGTTCAATCTTGCTGGAGACAGTCCAAGATTTTGGCGCTGATTACTTCGTGCTGTCATAATCTTCTGGAACTTGAACTGAAGAATGCTTGGTTGTCAGTGGATGGCTTGAACAAAATGAGTTCCCTCAAACGTTTGACCCTTGAATTTATAAGGTTAGATGATGAAGATCTGAGCAAGCTTAACCATAACTTCCCTCATCTTGAAGTCCTAAATTTGATAGGGGTTGGAGGCCTAAACGAACCGATAATTCATCTGTTGCACCTCGAAACCTGTCGATGGACTGTGTCAAATGCTCCGGTTTCTCTGAGCATTTGCGCACCGAGACTTTCGAGACTTGAACTCAAATGTGTCAAACCAAAATCTCTGATCATTGAAACTCCAATGCTATCTGATTTCCATCTTTCTCTGGAAGATGCAAGTGGGTTGCAAGTCAATGAATTCCCTTGCTTGAGAAAGCTTGAGCTTCATTCTCCTAGCCTCTGCAGTCTCATCACAACATTTTCACCTGCAAGAACTATCAAGGATCTCACACTAGGTACACTCCAACGCGCTGAAACCGTTGAATCCGTTAAGTTTTGCCTCGATACACTGTTTGAAACGTTTCCAAATCTTAGATTTCTTAAACTTGGCCCCGGAGTTCTGTCAGAAGTCGAAACTTATTATCGAGCTGGAGGTTCGGATGGACGGATGGGGATGAGAGATTTGAAAATGTTTCATAGTAGCCTTAAAACCTACAAGATTGAGTTGAAATTCCCTTTCATCATTTCCATTTTGGACAAATGTACCGATTCCTTCGATATGGCATTGCTGATCTATCACAATGCTGATTCTGGCTCTGGTAGTGGAATCATGTCAAAACGTTCTACTAATCATCCAAGACCAAGATGGAGATGGGAACTTTGGAAAGAAGGATCAAGAGAAGCGTGGGGTAAT

Coding sequence (CDS)

ATGGACGATCTTCCGCCATCGATAGTTCTCGAAATCCTGAATCGATTGGCCGATTCCGCCGATTTGGCTCGGTGCCGAGTCGCATCCAAAGCTCTCAATGTTCTCTCCCGCGAGGTTAGGTCACTGAACCTCTTCTGCTCATTGGATCGCTATCTCAAGTCTAGGGCTGTGGAGACGAAGCCATTGGTGACGCCTTTCAAGGTCATATTGAAGACTCTGATGAACAATTTTCCGGCTCTCGATTCTGTGTCGATCGGTGTGGAGAGGTCACTCGGACGGATTTCTTATGAGCACGACGATGTTGAAGATTGGTCCGATGATTTGTACCTGACGGATGCTGGCTTCGCTAGGGATTGGCTGCCGGCGATCGGTGGAGATTTAACGTCCTTGTCGATCGTCGATTTTTGGGTTCAATCTTGCTGGAGACAGTCCAAGATTTTGGCGCTGATTACTTCGTGCTGTCATAATCTTCTGGAACTTGAACTGAAGAATGCTTGGTTGTCAGTGGATGGCTTGAACAAAATGAGTTCCCTCAAACGTTTGACCCTTGAATTTATAAGGTTAGATGATGAAGATCTGAGCAAGCTTAACCATAACTTCCCTCATCTTGAAGTCCTAAATTTGATAGGGGTTGGAGGCCTAAACGAACCGATAATTCATCTGTTGCACCTCGAAACCTGTCGATGGACTGTGTCAAATGCTCCGGTTTCTCTGAGCATTTGCGCACCGAGACTTTCGAGACTTGAACTCAAATGTGTCAAACCAAAATCTCTGATCATTGAAACTCCAATGCTATCTGATTTCCATCTTTCTCTGGAAGATGCAAGTGGGTTGCAAGTCAATGAATTCCCTTGCTTGAGAAAGCTTGAGCTTCATTCTCCTAGCCTCTGCAGTCTCATCACAACATTTTCACCTGCAAGAACTATCAAGGATCTCACACTAGGTACACTCCAACGCGCTGAAACCGTTGAATCCGTTAAGTTTTGCCTCGATACACTGTTTGAAACGTTTCCAAATCTTAGATTTCTTAAACTTGGCCCCGGAGTTCTGTCAGAAGTCGAAACTTATTATCGAGCTGGAGGTTCGGATGGACGGATGGGGATGAGAGATTTGAAAATGTTTCATAGTAGCCTTAAAACCTACAAGATTGAGTTGAAATTCCCTTTCATCATTTCCATTTTGGACAAATGTACCGATTCCTTCGATATGGCATTGCTGATCTATCACAATGCTGATTCTGGCTCTGGTAGTGGAATCATGTCAAAACGTTCTACTAATCATCCAAGACCAAGATGGAGATGGGAACTTTGGAAAGAAGGATCAAGAGAAGCGTGGGGTAAT

Protein sequence

MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLITTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAWGN

Homology

[Close]

BLAST of MS004323 vs. NCBI nr
Match: XP_022139279.1 (F-box/LRR-repeat protein At4g29420 [Momordica charantia])

HSP 1 Score: 899.0 bits (2322), Expect = 1.6e-257
Identity = 446/447 (99.78%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK
Sbjct: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
           PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL
Sbjct: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIGGDLTSLSIVDFWVQSCWRQS+ILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR
Sbjct: 121 PAIGGDLTSLSIVDFWVQSCWRQSEILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
           CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
Sbjct: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG
Sbjct: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM
Sbjct: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAWGN 448
           SKRSTNHPRPRWRWELWKEGSREAWGN
Sbjct: 421 SKRSTNHPRPRWRWELWKEGSREAWGN 447

[Close]

BLAST of MS004323 vs. NCBI nr
Match: XP_038893164.1 (F-box/LRR-repeat protein At4g29420 [Benincasa hispida])

HSP 1 Score: 757.7 bits (1955), Expect = 5.7e-215
Identity = 376/445 (84.49%), Postives = 406/445 (91.24%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPP +VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPPLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRATETK 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LVTPFKVILKTLMN+F ALDSVSIGVE+SLGRISYEHDDVEDWSDDL+LTD G+A++WL
Sbjct: 61  LLVTPFKVILKTLMNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG +LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL++M SLK 
Sbjct: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS++N NFPHLEVLNL+GVGGLNEP IHLLHL+TC+W VSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNCNFPHLEVLNLMGVGGLNEPKIHLLHLKTCKWKVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
            AP LS+LELKCVKPKSLIIETPMLSDFH  LEDASGLQVN FPCLRKL LHSP L SLI
Sbjct: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNGFPCLRKLHLHSPCLDSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE++ESVKFCLDT+FE FPNL FLKLGPGVLSE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLDTMQRAESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G +GRMGMRDLK  HSSLKTYKIE+K PFIISIL+KCTD FDMALL+YHNADS    GI+
Sbjct: 361 GLEGRMGMRDLKKIHSSLKTYKIEVKLPFIISILEKCTDPFDMALLVYHNADSDITGGII 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
            KR+TNHPRPRWRWELWKEGS EAW
Sbjct: 421 PKRATNHPRPRWRWELWKEGSMEAW 445

[Close]

BLAST of MS004323 vs. NCBI nr
Match: XP_022945179.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita moschata])

HSP 1 Score: 752.3 bits (1941), Expect = 2.4e-213
Identity = 372/445 (83.60%), Postives = 404/445 (90.79%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDDVEDWSDDL+LTD GFAR+WL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK 
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS++N+NFPHLE+LNLIGVGGLNEP IHL HL+TCRWTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
           CAP LS+LELKCVKPKSLII+TPMLSDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGVLSE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS DM LLIY NADS    GIM
Sbjct: 361 GLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDSLDMELLIYRNADSHLAGGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
           SKR+ NHPRP+WRWELWKEG +E W
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPW 445

[Close]

BLAST of MS004323 vs. NCBI nr
Match: XP_023542813.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 747.3 bits (1928), Expect = 7.8e-212
Identity = 369/445 (82.92%), Postives = 402/445 (90.34%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISY HDDVEDWSDDL+LTD GFAR+WL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYWHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK 
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS++N+NFPHLE+LNLIGVGGLNEP IHL HL+TCRWTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
           CAP LS+LELKCVKPKSLII+TPMLSDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGV SE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G D R+GMRDLK  H+SL+TYK+ELK PFII IL+KCTDS DM LLIYHNADS    GIM
Sbjct: 361 GLDERIGMRDLKKIHASLETYKVELKLPFIIPILEKCTDSLDMELLIYHNADSHLAGGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
           SKR+ NHPRP+WRWELWKEG +E W
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPW 445

[Close]

BLAST of MS004323 vs. NCBI nr
Match: XP_022966761.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita maxima] >XP_022966762.1 F-box/LRR-repeat protein At4g29420 [Cucurbita maxima])

HSP 1 Score: 745.7 bits (1924), Expect = 2.3e-211
Identity = 368/445 (82.70%), Postives = 402/445 (90.34%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPS+VLEILNRL+DSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+
Sbjct: 1   MDDLPPSLVLEILNRLSDSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDDVEDWSDDL+LTD GFAR+WL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK 
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS++N+NFPHLE+LNLIGVGGLNEP IHL  L+TCRWTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSQLKTCRWTVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
           CAP LS+LELKCVKPKSLII+TPM+SDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMVSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGV SE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS  M LLIYHNADS    GIM
Sbjct: 361 GLDGRIGMRDLKKIHASLETYKIELKLPFIIPILEKCTDSLGMELLIYHNADSHLAGGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
           SKR+ NHPRP+WRWELWKEG +E W
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPW 445

[Close]

BLAST of MS004323 vs. ExPASy Swiss-Prot
Match: Q9M0E1 (F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana OX=3702 GN=At4g29420 PE=2 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 7.8e-114
Identity = 218/449 (48.55%), Postives = 302/449 (67.26%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MD+LPP + ++IL+R+ DS  LARCRVASK LN LSREVR++NL C+  RYLKSR++   
Sbjct: 1   MDELPPELWIKILSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSI--- 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            +VTPFK I ++L+ N   + S+S+GV+++L  +S++  + ED S DLYLTD  F ++WL
Sbjct: 61  VVVTPFKTIFRSLIENSSKIRSISVGVDKALKGMSFDDFNEED-SKDLYLTDVEFVKEWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           P +  DL +LSI DFW+QSCWR+S ILALI+S C  L++LE+KNAWLSV GL +M +L+ 
Sbjct: 121 PRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRY 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDE+L K+N  FP L+ LNLIGVGGL EP IH LHL++C WTVSNAP+SL+I
Sbjct: 181 LTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKEPRIHFLHLKSCHWTVSNAPLSLAI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
            AP L  L+LKC KPKSL++ETP L   HLS+EDA G+   EF  L+ LEL SP +  LI
Sbjct: 241 VAPNLLELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           +  S    IK L + +++  E  E ++  L T+ + FP +  L L P   S++ET++++ 
Sbjct: 301 SNISFGNKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDIETHFQSQ 360

Query: 361 GSDGRM-GMRDLKMFHSSLKT---YKIELKFPFIISILDKCTDSFDMALLIYHNADSGSG 420
           G  G M G   LK   + ++      +     FI SI++K     DM L+I+ + D    
Sbjct: 361 GGLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVR 420

Query: 421 SGIMSKRSTNHPRPRWRWELWKEGSREAW 446
           S ++S    ++PR RW+W +W EG  + W
Sbjct: 421 SNLISTCMMSNPRVRWKWGMWAEGGEDMW 445

[Close]

BLAST of MS004323 vs. ExPASy TrEMBL
Match: A0A6J1CCH4 (F-box/LRR-repeat protein At4g29420 OS=Momordica charantia OX=3673 GN=LOC111010234 PE=4 SV=1)

HSP 1 Score: 899.0 bits (2322), Expect = 7.7e-258
Identity = 446/447 (99.78%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK
Sbjct: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
           PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL
Sbjct: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIGGDLTSLSIVDFWVQSCWRQS+ILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR
Sbjct: 121 PAIGGDLTSLSIVDFWVQSCWRQSEILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
           CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
Sbjct: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG
Sbjct: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM
Sbjct: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAWGN 448
           SKRSTNHPRPRWRWELWKEGSREAWGN
Sbjct: 421 SKRSTNHPRPRWRWELWKEGSREAWGN 447

[Close]

BLAST of MS004323 vs. ExPASy TrEMBL
Match: A0A6J1G095 (F-box/LRR-repeat protein At4g29420 OS=Cucurbita moschata OX=3662 GN=LOC111449498 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.2e-213
Identity = 372/445 (83.60%), Postives = 404/445 (90.79%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDDVEDWSDDL+LTD GFAR+WL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK 
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS++N+NFPHLE+LNLIGVGGLNEP IHL HL+TCRWTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
           CAP LS+LELKCVKPKSLII+TPMLSDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGVLSE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS DM LLIY NADS    GIM
Sbjct: 361 GLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDSLDMELLIYRNADSHLAGGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
           SKR+ NHPRP+WRWELWKEG +E W
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPW 445

[Close]

BLAST of MS004323 vs. ExPASy TrEMBL
Match: A0A6J1HNV0 (F-box/LRR-repeat protein At4g29420 OS=Cucurbita maxima OX=3661 GN=LOC111466376 PE=4 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 1.1e-211
Identity = 368/445 (82.70%), Postives = 402/445 (90.34%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPS+VLEILNRL+DSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+
Sbjct: 1   MDDLPPSLVLEILNRLSDSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDDVEDWSDDL+LTD GFAR+WL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK 
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS++N+NFPHLE+LNLIGVGGLNEP IHL  L+TCRWTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSQLKTCRWTVSNAPVSLSI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
           CAP LS+LELKCVKPKSLII+TPM+SDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMVSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGV SE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS  M LLIYHNADS    GIM
Sbjct: 361 GLDGRIGMRDLKKIHASLETYKIELKLPFIIPILEKCTDSLGMELLIYHNADSHLAGGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
           SKR+ NHPRP+WRWELWKEG +E W
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPW 445

[Close]

BLAST of MS004323 vs. ExPASy TrEMBL
Match: A0A5D3CX32 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003230 PE=4 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 1.2e-210
Identity = 373/445 (83.82%), Postives = 404/445 (90.79%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSR+VRS+NLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LVTPFKVILKTL+N+F ALDSVSIGVE+SLGRISYEHDDVEDWSDDL+LTD G+A++WL
Sbjct: 61  LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG +LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL++M+SLK 
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS+LN+NFPHLEVLNLIGVGGLNEP I LLHL+TC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
            AP LS+LELKCVKPK LIIETPMLSDFH  LEDASGLQV+EFPCLRKL LH P L SLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE+VESVKFCLDT+FE FPNL FLKLGPGVLSE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G +GRMGMRDLK  HSSLKT KIELK PFII IL+KCTDSFDMALL+Y NADS    GIM
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
           SKR+ N  RPRWRWELWK+GSREAW
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAW 445

[Close]

BLAST of MS004323 vs. ExPASy TrEMBL
Match: A0A1S4DWD1 (F-box/LRR-repeat protein At4g29420 OS=Cucumis melo OX=3656 GN=LOC103488800 PE=4 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 1.2e-210
Identity = 373/445 (83.82%), Postives = 404/445 (90.79%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSR+VRS+NLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            LVTPFKVILKTL+N+F ALDSVSIGVE+SLGRISYEHDDVEDWSDDL+LTD G+A++WL
Sbjct: 61  LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           PAIG +LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL++M+SLK 
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDEDLS+LN+NFPHLEVLNLIGVGGLNEP I LLHL+TC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
            AP LS+LELKCVKPK LIIETPMLSDFH  LEDASGLQV+EFPCLRKL LH P L SLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           TTFS ARTIK+LTL T+QRAE+VESVKFCLDT+FE FPNL FLKLGPGVLSE ET Y+A 
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360

Query: 361 GSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIM 420
           G +GRMGMRDLK  HSSLKT KIELK PFII IL+KCTDSFDMALL+Y NADS    GIM
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420

Query: 421 SKRSTNHPRPRWRWELWKEGSREAW 446
           SKR+ N  RPRWRWELWK+GSREAW
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAW 445

[Close]

BLAST of MS004323 vs. TAIR 10
Match: AT4G29420.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 412.1 bits (1058), Expect = 5.5e-115
Identity = 218/449 (48.55%), Postives = 302/449 (67.26%), Query Frame = 0


Query: 1   MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK 60
           MD+LPP + ++IL+R+ DS  LARCRVASK LN LSREVR++NL C+  RYLKSR++   
Sbjct: 1   MDELPPELWIKILSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSI--- 60

Query: 61  PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYLTDAGFARDWL 120
            +VTPFK I ++L+ N   + S+S+GV+++L  +S++  + ED S DLYLTD  F ++WL
Sbjct: 61  VVVTPFKTIFRSLIENSSKIRSISVGVDKALKGMSFDDFNEED-SKDLYLTDVEFVKEWL 120

Query: 121 PAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKR 180
           P +  DL +LSI DFW+QSCWR+S ILALI+S C  L++LE+KNAWLSV GL +M +L+ 
Sbjct: 121 PRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRY 180

Query: 181 LTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSI 240
           LTLEFIRLDDE+L K+N  FP L+ LNLIGVGGL EP IH LHL++C WTVSNAP+SL+I
Sbjct: 181 LTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKEPRIHFLHLKSCHWTVSNAPLSLAI 240

Query: 241 CAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI 300
            AP L  L+LKC KPKSL++ETP L   HLS+EDA G+   EF  L+ LEL SP +  LI
Sbjct: 241 VAPNLLELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLI 300

Query: 301 TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAG 360
           +  S    IK L + +++  E  E ++  L T+ + FP +  L L P   S++ET++++ 
Sbjct: 301 SNISFGNKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDIETHFQSQ 360

Query: 361 GSDGRM-GMRDLKMFHSSLKT---YKIELKFPFIISILDKCTDSFDMALLIYHNADSGSG 420
           G  G M G   LK   + ++      +     FI SI++K     DM L+I+ + D    
Sbjct: 361 GGLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVR 420

Query: 421 SGIMSKRSTNHPRPRWRWELWKEGSREAW 446
           S ++S    ++PR RW+W +W EG  + W
Sbjct: 421 SNLISTCMMSNPRVRWKWGMWAEGGEDMW 445

[Close]

BLAST of MS004323 vs. TAIR 10
Match: AT1G78100.1 (F-box family protein )

HSP 1 Score: 45.8 bits (107), Expect = 1.0e-04
Identity = 42/149 (28.19%), Postives = 67/149 (44.97%), Query Frame = 0


Query: 2   DDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK- 61
           D +P  +V++ILNR+ D   L RCR  SK  N L+ +  SL L   LD+ L +   +++ 
Sbjct: 5   DAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLL--QLDQILGATESDSEI 64

Query: 62  --PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRI------------SYEHDDVEDWSD 121
             P+ + F+ + K++    P + S     +  L R                + +VE +  
Sbjct: 65  DSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVELYGG 124

Query: 122 DLYLTDAGFARDWLPAIGGDLTSLSIVDF 136
           D+ L + G A  W    G  L S  IV F
Sbjct: 125 DVKL-EKGAAVKWKAEFGKTLKSCVIVAF 150

The following BLAST results are available for this feature:

BLAST of MS004323 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139279.1	1.6e-257	99.78	F-box/LRR-repeat protein At4g29420 [Momordica charantia]	[more]
XP_038893164.1	5.7e-215	84.49	F-box/LRR-repeat protein At4g29420 [Benincasa hispida]	[more]
XP_022945179.1	2.4e-213	83.60	F-box/LRR-repeat protein At4g29420 [Cucurbita moschata]	[more]
XP_023542813.1	7.8e-212	82.92	F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo]	[more]
XP_022966761.1	2.3e-211	82.70	F-box/LRR-repeat protein At4g29420 [Cucurbita maxima] >XP_022966762.1 F-box/LRR-...	[more]

BLAST of MS004323 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0E1	7.8e-114	48.55	F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana OX=3702 GN=At4g29420 ...	[more]

BLAST of MS004323 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCH4	7.7e-258	99.78	F-box/LRR-repeat protein At4g29420 OS=Momordica charantia OX=3673 GN=LOC11101023...	[more]
A0A6J1G095	1.2e-213	83.60	F-box/LRR-repeat protein At4g29420 OS=Cucurbita moschata OX=3662 GN=LOC111449498...	[more]
A0A6J1HNV0	1.1e-211	82.70	F-box/LRR-repeat protein At4g29420 OS=Cucurbita maxima OX=3661 GN=LOC111466376 P...	[more]
A0A5D3CX32	1.2e-210	83.82	F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4DWD1	1.2e-210	83.82	F-box/LRR-repeat protein At4g29420 OS=Cucumis melo OX=3656 GN=LOC103488800 PE=4 ...	[more]

BLAST of MS004323 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29420.1	5.5e-115	48.55	F-box/RNI-like superfamily protein	[more]
AT1G78100.1	1.0e-04	28.19	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 63..363 e-value: 2.2E-10 score: 41.5
IPR044809	F-box protein AUF1-like	PANTHER	PTHR31215	OS05G0510400 PROTEIN-RELATED	coord: 2..445
None	No IPR available	PANTHER	PTHR31215:SF23	OS01G0193500 PROTEIN	coord: 2..445
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 107..346
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004323.1	MS004323.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding