MS004308 (gene) Bitter gourd (TR) v1

Overview


Name	MS004308
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	dr1-associated corepressor
Location	scaffold92: 1720559 .. 1722027 (-)
RNA-Seq Expression	MS004308
Synteny	MS004308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCAGATGAAGATGTTGGAAAGATAGCATTGGCAGTGCCCGTTTTAGTTTGTAAGTAAATGTGACAGATATTTAGTAGTCTGCAATGACATGGATGTTCCATATAAGAAATTTATGATTGTCTAATGTTTCTTGAACATGAATACCAGCTAAAGCATTGGAACTATTCCTGCAAGACCTCTGTGATCGTACATATGAGATTACTCTACAAAGGGGAGCAAAGACAATGAATTCATTGCACCTGTAAGAGAACATTTTCACCGACTTATTTTATGAAGTTTTGTGAAAGCCTTGCATTTGAACTCGGGAAATTTACAGTTTATCTTATGTTTTAGATTTTTGCTTCGAATTTACTTTTAGCATCTAACTTATTAATTCCTTGGGTGACCCTACAATATTATTGGTGGTAACTGGTATCATATACATACTCTGTTCCCCCTTCCTCATTTCTTTCCAAAAATCTGATAGTGGTATAGTAATTGGTACCATATACGTACCTTGTTCCCCCTTCCTCATTTCTTTCCCAAAATCTGGTTGTTGTGTTTTTGGATATTGATTTCTCTTAACATTATTTCTGAACCTTTATTACAGAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATCGTTAGTCGGGTTCCGGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGTATAATACATTAAAATTTTCCTACTTCTATTTTGTTACAATTGATATATAACTAAACGTGCTTAATATCTATCCGATCAGGAAACCTCTTGGTGATGAGGGCAATGATTTTGATGAGTTGAAGAAGAGCAAGATGGTAATTATTTTTTCCTCTATTATGTATGGTGACTAAATAGCCTGCCAGAGACTGCATTTTCTTTGACAGAGAATCCAAGGCTTCAGAATTAGTAGTTGCATGTCACTTAAGAGTGCTTCCGGATAGATATAATGATTTCTTTTCCCTTTTTTTCTCCAGCATGACATGAGCCACAGCAGCGGCGGTAGAGGAAGAGGAAGAGGACGAGGACGGGGTCGTGGACGGCCTGCTCGGTCAGCCGAAAGAGACAACTTCCAACCTAACCCTGACGCCGACCCTTGCTCGTCTATAGAGAACAGGAACAAGAACCACCCCAACCCAGATGTGCACATGGATCATCACGTCGAGCCTAGCGAAACATCAAAAGAAGTTGGCGAAGCCAACCAACCTGTCCAAAGTTTTGATCTCAATGCCGACGTCATCGCCAACGAAGACTCCAAGACTGTTGTTGCAGCAGCAGCAGTATCAGACACGCCCGTCGAATCAGCCGGGCCTACTATCACCGAGTCTGAGGCTAAAGCCGCGGACGAGTTCGTGGACAAAATGGCAATCGACCCTCTCCAATATGCACATCTGAGCAGCACAAGGGTAGAGGAAGAAGAGGAAGATTATGATGAAGAGGAG

mRNA sequence

ATGCAAGCAGATGAAGATGTTGGAAAGATAGCATTGGCAGTGCCCGTTTTAGTTTCTAAAGCATTGGAACTATTCCTGCAAGACCTCTGTGATCGTACATATGAGATTACTCTACAAAGGGGAGCAAAGACAATGAATTCATTGCACCTAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATCGTTAGTCGGGTTCCGGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAACCTCTTGGTGATGAGGGCAATGATTTTGATGAGTTGAAGAAGAGCAAGATGCATGACATGAGCCACAGCAGCGGCGGTAGAGGAAGAGGAAGAGGACGAGGACGGGGTCGTGGACGGCCTGCTCGGTCAGCCGAAAGAGACAACTTCCAACCTAACCCTGACGCCGACCCTTGCTCGTCTATAGAGAACAGGAACAAGAACCACCCCAACCCAGATGTGCACATGGATCATCACGTCGAGCCTAGCGAAACATCAAAAGAAGTTGGCGAAGCCAACCAACCTGTCCAAAGTTTTGATCTCAATGCCGACGTCATCGCCAACGAAGACTCCAAGACTGTTGTTGCAGCAGCAGCAGTATCAGACACGCCCGTCGAATCAGCCGGGCCTACTATCACCGAGTCTGAGGCTAAAGCCGCGGACGAGTTCGTGGACAAAATGGCAATCGACCCTCTCCAATATGCACATCTGAGCAGCACAAGGGTAGAGGAAGAAGAGGAAGATTATGATGAAGAGGAG

Coding sequence (CDS)

ATGCAAGCAGATGAAGATGTTGGAAAGATAGCATTGGCAGTGCCCGTTTTAGTTTCTAAAGCATTGGAACTATTCCTGCAAGACCTCTGTGATCGTACATATGAGATTACTCTACAAAGGGGAGCAAAGACAATGAATTCATTGCACCTAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATCGTTAGTCGGGTTCCGGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAACCTCTTGGTGATGAGGGCAATGATTTTGATGAGTTGAAGAAGAGCAAGATGCATGACATGAGCCACAGCAGCGGCGGTAGAGGAAGAGGAAGAGGACGAGGACGGGGTCGTGGACGGCCTGCTCGGTCAGCCGAAAGAGACAACTTCCAACCTAACCCTGACGCCGACCCTTGCTCGTCTATAGAGAACAGGAACAAGAACCACCCCAACCCAGATGTGCACATGGATCATCACGTCGAGCCTAGCGAAACATCAAAAGAAGTTGGCGAAGCCAACCAACCTGTCCAAAGTTTTGATCTCAATGCCGACGTCATCGCCAACGAAGACTCCAAGACTGTTGTTGCAGCAGCAGCAGTATCAGACACGCCCGTCGAATCAGCCGGGCCTACTATCACCGAGTCTGAGGCTAAAGCCGCGGACGAGTTCGTGGACAAAATGGCAATCGACCCTCTCCAATATGCACATCTGAGCAGCACAAGGGTAGAGGAAGAAGAGGAAGATTATGATGAAGAGGAG

Protein sequence

MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGRGRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEANQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEFVDKMAIDPLQYAHLSSTRVEEEEEDYDEEE

Homology

[Close]

BLAST of MS004308 vs. NCBI nr
Match: XP_022139253.1 (dr1-associated corepressor isoform X2 [Momordica charantia])

HSP 1 Score: 495.0 bits (1273), Expect = 4.1e-136
Identity = 258/261 (98.85%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR
Sbjct: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDNFQ NPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA
Sbjct: 121 GRGRGRGRPARSAERDNFQTNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEFVDKMAIDPL 240
           NQPVQSFDLNADVIAN DSKTVVAAAAVSDTPVESAGPTITESE KAADEFVDKMAIDPL
Sbjct: 181 NQPVQSFDLNADVIANGDSKTVVAAAAVSDTPVESAGPTITESETKAADEFVDKMAIDPL 240

Query: 241 QYAHLSSTRVEEEEEDYDEEE 262
           QYAHLSSTRVEEEEEDYDEEE
Sbjct: 241 QYAHLSSTRVEEEEEDYDEEE 261

[Close]

BLAST of MS004308 vs. NCBI nr
Match: XP_022139252.1 (dr1-associated corepressor isoform X1 [Momordica charantia])

HSP 1 Score: 495.0 bits (1273), Expect = 4.1e-136
Identity = 258/261 (98.85%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 18  MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 77

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR
Sbjct: 78  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 137

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDNFQ NPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA
Sbjct: 138 GRGRGRGRPARSAERDNFQTNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 197

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEFVDKMAIDPL 240
           NQPVQSFDLNADVIAN DSKTVVAAAAVSDTPVESAGPTITESE KAADEFVDKMAIDPL
Sbjct: 198 NQPVQSFDLNADVIANGDSKTVVAAAAVSDTPVESAGPTITESETKAADEFVDKMAIDPL 257

Query: 241 QYAHLSSTRVEEEEEDYDEEE 262
           QYAHLSSTRVEEEEEDYDEEE
Sbjct: 258 QYAHLSSTRVEEEEEDYDEEE 278

[Close]

BLAST of MS004308 vs. NCBI nr
Match: XP_038891962.1 (uncharacterized protein LOC120081293 [Benincasa hispida])

HSP 1 Score: 434.9 bits (1117), Expect = 5.0e-118
Identity = 234/268 (87.31%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 76  MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 135

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSH S GRGRGR
Sbjct: 136 DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHGSTGRGRGR 195

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPAR+AERDNFQPN D DPC+SIENRNKN  NPDVHM+HHVEP+ET KE+GEA
Sbjct: 196 GRGRGRGRPARTAERDNFQPNLDVDPCTSIENRNKN-SNPDVHMEHHVEPNETPKEIGEA 255

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEF-------VD 240
           NQ +Q+FDLNADV A+EDSKTV AAAAVS+ PVE A P  TESE KAADEF       VD
Sbjct: 256 NQAIQNFDLNADVNASEDSKTVAAAAAVSEAPVEPAVPATTESETKAADEFPAWPLSDVD 315

Query: 241 KMAIDPLQYAHLSSTRVEEEEEDYDEEE 262
           KMAIDPLQYAHLSS RV+EEEEDYDEEE
Sbjct: 316 KMAIDPLQYAHLSS-RVDEEEEDYDEEE 341

[Close]

BLAST of MS004308 vs. NCBI nr
Match: XP_008445943.1 (PREDICTED: dr1-associated corepressor [Cucumis melo] >KAA0034126.1 dr1-associated corepressor [Cucumis melo var. makuwa])

HSP 1 Score: 432.2 bits (1110), Expect = 3.2e-117
Identity = 232/268 (86.57%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 18  MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 77

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSH S GRGRGR
Sbjct: 78  DFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHGSTGRGRGR 137

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDN+QPNPD DPC+SIENRNKN PNPDVHM+HHVEP +T KEV EA
Sbjct: 138 GRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKN-PNPDVHMEHHVEPGDTPKEVSEA 197

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEF-------VD 240
           NQ +Q+FDLNADV  NEDSKT V AAAVSD P+E A PT TESE KA DEF       VD
Sbjct: 198 NQAIQNFDLNADVSTNEDSKT-VPAAAVSDAPIEPAAPTTTESETKAVDEFHAWPLSDVD 257

Query: 241 KMAIDPLQYAHLSSTRVEEEEEDYDEEE 262
           KMAIDPLQY HLSS RV+EEEEDYDEEE
Sbjct: 258 KMAIDPLQYTHLSS-RVDEEEEDYDEEE 282

[Close]

BLAST of MS004308 vs. NCBI nr
Match: TYK15793.1 (dr1-associated corepressor [Cucumis melo var. makuwa])

HSP 1 Score: 432.2 bits (1110), Expect = 3.2e-117
Identity = 232/268 (86.57%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSH S GRGRGR
Sbjct: 61  DFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHGSTGRGRGR 120

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDN+QPNPD DPC+SIENRNKN PNPDVHM+HHVEP +T KEV EA
Sbjct: 121 GRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKN-PNPDVHMEHHVEPGDTPKEVSEA 180

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEF-------VD 240
           NQ +Q+FDLNADV  NEDSKT V AAAVSD P+E A PT TESE KA DEF       VD
Sbjct: 181 NQAIQNFDLNADVSTNEDSKT-VPAAAVSDAPIEPAAPTTTESETKAVDEFHAWPLSDVD 240

Query: 241 KMAIDPLQYAHLSSTRVEEEEEDYDEEE 262
           KMAIDPLQY HLSS RV+EEEEDYDEEE
Sbjct: 241 KMAIDPLQYTHLSS-RVDEEEEDYDEEE 265

[Close]

BLAST of MS004308 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 61/177 (34.46%), Postives = 85/177 (48.02%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKTM + HLK C++    F
Sbjct: 21  MQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQF 80

Query: 61  DFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGR 120
           DFL+D+V+ VPD  G G   H DG    R+ RK                       SG  
Sbjct: 81  DFLKDLVASVPDMQGDGEDNHMDGDKGPRRGRK-----------------------SGSS 140

Query: 121 GRGRGRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSET 174
           GR  G    +G+  + +  D+ Q +   D  S  E      P    H   H +   T
Sbjct: 141 GRKNGGMGSKGKDKKLSGTDSEQEDESEDTDSDGEEETPQVPPQASHPPAHFQSPPT 174

[Close]

BLAST of MS004308 vs. ExPASy Swiss-Prot
Match: Q9D6N5 (Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=3)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 60/177 (33.90%), Postives = 85/177 (48.02%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKTM + HLK C++    F
Sbjct: 21  MQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQF 80

Query: 61  DFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGR 120
           DFL+D+V+ VPD  G G   H DG    R+ RKP                       G  
Sbjct: 81  DFLKDLVASVPDMQGDGEDNHVDGDKGPRRGRKP-----------------------GSS 140

Query: 121 GRGRGRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSET 174
           GR  G    +G+  + +  D+ Q +   D  +  E      P    H   H +   T
Sbjct: 141 GRKNGGTGSKGKDKKLSGTDSEQEDESEDTDTDGEEETPQLPPQASHPPAHFQSPPT 174

[Close]

BLAST of MS004308 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14
Identity = 62/177 (35.03%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKTM + HLK C++    F
Sbjct: 21  MQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQF 80

Query: 61  DFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGR 120
           DFL+D+V+ VPD  G G   H DG    R+ RKP                      SGGR
Sbjct: 81  DFLKDLVASVPDMQGDGEDNHMDGDKGARRGRKP---------------------GSGGR 140

Query: 121 GRGRGRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSET 174
             G G G  + +  + +  D+ Q +   D  +  E      P    H   H +   T
Sbjct: 141 KNG-GMGT-KSKDKKLSGTDSEQEDESEDTDTDGEEETSQPPPQASHPSAHFQSPPT 174

[Close]

BLAST of MS004308 vs. ExPASy Swiss-Prot
Match: A0JPP1 (Dr1-associated corepressor OS=Rattus norvegicus OX=10116 GN=Drap1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14
Identity = 59/177 (33.33%), Postives = 85/177 (48.02%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKTM + HLK C++    F
Sbjct: 21  MQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQF 80

Query: 61  DFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGR 120
           DFL+D+V+ VPD  G G   H+DG    R+ RKP                       G  
Sbjct: 81  DFLKDLVASVPDMQGDGEDNHTDGDKGPRRGRKP-----------------------GSS 140

Query: 121 GRGRGRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSET 174
           GR  G    + +  + +  D+ Q +   D  +  E      P    H   H +   T
Sbjct: 141 GRKNGGTGSKSKDKKLSGTDSEQEDESEDTDTDGEEETPQAPPQASHPPAHFQSPPT 174

[Close]

BLAST of MS004308 vs. ExPASy Swiss-Prot
Match: Q10315 (Transcription regulator complex subunit bur6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bur6 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-14
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQAD+DVGK+A   PV++SKALELF+Q +   + + T    AK +   HLKH VQS   F
Sbjct: 33  MQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQAKRVTVSHLKHAVQSVEQF 92

Query: 61  DFLRDIVSRVPD 73
           DFL+DIV +VPD
Sbjct: 93  DFLQDIVEKVPD 104

[Close]

BLAST of MS004308 vs. ExPASy TrEMBL
Match: A0A6J1CDG1 (dr1-associated corepressor isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010209 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.0e-136
Identity = 258/261 (98.85%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 18  MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 77

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR
Sbjct: 78  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 137

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDNFQ NPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA
Sbjct: 138 GRGRGRGRPARSAERDNFQTNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 197

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEFVDKMAIDPL 240
           NQPVQSFDLNADVIAN DSKTVVAAAAVSDTPVESAGPTITESE KAADEFVDKMAIDPL
Sbjct: 198 NQPVQSFDLNADVIANGDSKTVVAAAAVSDTPVESAGPTITESETKAADEFVDKMAIDPL 257

Query: 241 QYAHLSSTRVEEEEEDYDEEE 262
           QYAHLSSTRVEEEEEDYDEEE
Sbjct: 258 QYAHLSSTRVEEEEEDYDEEE 278

[Close]

BLAST of MS004308 vs. ExPASy TrEMBL
Match: A0A6J1CF91 (dr1-associated corepressor isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010209 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.0e-136
Identity = 258/261 (98.85%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR
Sbjct: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDNFQ NPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA
Sbjct: 121 GRGRGRGRPARSAERDNFQTNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEFVDKMAIDPL 240
           NQPVQSFDLNADVIAN DSKTVVAAAAVSDTPVESAGPTITESE KAADEFVDKMAIDPL
Sbjct: 181 NQPVQSFDLNADVIANGDSKTVVAAAAVSDTPVESAGPTITESETKAADEFVDKMAIDPL 240

Query: 241 QYAHLSSTRVEEEEEDYDEEE 262
           QYAHLSSTRVEEEEEDYDEEE
Sbjct: 241 QYAHLSSTRVEEEEEDYDEEE 261

[Close]

BLAST of MS004308 vs. ExPASy TrEMBL
Match: A0A5D3CVA8 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002970 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117
Identity = 232/268 (86.57%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSH S GRGRGR
Sbjct: 61  DFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHGSTGRGRGR 120

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDN+QPNPD DPC+SIENRNKN PNPDVHM+HHVEP +T KEV EA
Sbjct: 121 GRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKN-PNPDVHMEHHVEPGDTPKEVSEA 180

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEF-------VD 240
           NQ +Q+FDLNADV  NEDSKT V AAAVSD P+E A PT TESE KA DEF       VD
Sbjct: 181 NQAIQNFDLNADVSTNEDSKT-VPAAAVSDAPIEPAAPTTTESETKAVDEFHAWPLSDVD 240

Query: 241 KMAIDPLQYAHLSSTRVEEEEEDYDEEE 262
           KMAIDPLQY HLSS RV+EEEEDYDEEE
Sbjct: 241 KMAIDPLQYTHLSS-RVDEEEEDYDEEE 265

[Close]

BLAST of MS004308 vs. ExPASy TrEMBL
Match: A0A5A7SW18 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001170 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117
Identity = 232/268 (86.57%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 18  MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 77

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSH S GRGRGR
Sbjct: 78  DFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHGSTGRGRGR 137

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDN+QPNPD DPC+SIENRNKN PNPDVHM+HHVEP +T KEV EA
Sbjct: 138 GRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKN-PNPDVHMEHHVEPGDTPKEVSEA 197

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEF-------VD 240
           NQ +Q+FDLNADV  NEDSKT V AAAVSD P+E A PT TESE KA DEF       VD
Sbjct: 198 NQAIQNFDLNADVSTNEDSKT-VPAAAVSDAPIEPAAPTTTESETKAVDEFHAWPLSDVD 257

Query: 241 KMAIDPLQYAHLSSTRVEEEEEDYDEEE 262
           KMAIDPLQY HLSS RV+EEEEDYDEEE
Sbjct: 258 KMAIDPLQYTHLSS-RVDEEEEDYDEEE 282

[Close]

BLAST of MS004308 vs. ExPASy TrEMBL
Match: A0A1S3BDV9 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488818 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117
Identity = 232/268 (86.57%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF
Sbjct: 18  MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 77

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGR 120
           DFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSH S GRGRGR
Sbjct: 78  DFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHGSTGRGRGR 137

Query: 121 GRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEA 180
           GRGRGRGRPARSAERDN+QPNPD DPC+SIENRNKN PNPDVHM+HHVEP +T KEV EA
Sbjct: 138 GRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKN-PNPDVHMEHHVEPGDTPKEVSEA 197

Query: 181 NQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADEF-------VD 240
           NQ +Q+FDLNADV  NEDSKT V AAAVSD P+E A PT TESE KA DEF       VD
Sbjct: 198 NQAIQNFDLNADVSTNEDSKT-VPAAAVSDAPIEPAAPTTTESETKAVDEFHAWPLSDVD 257

Query: 241 KMAIDPLQYAHLSSTRVEEEEEDYDEEE 262
           KMAIDPLQY HLSS RV+EEEEDYDEEE
Sbjct: 258 KMAIDPLQYTHLSS-RVDEEEEDYDEEE 282

[Close]

BLAST of MS004308 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 )

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-52
Identity = 140/289 (48.44%), Postives = 177/289 (61.25%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQADEDVGKIALAVPVLVSK+LELFLQDLCDRTYEITL+RGAKT++SLHLKHCV+ Y+VF
Sbjct: 18  MQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLKHCVERYNVF 77

Query: 61  DFLRDIVSRVPDYGH----GHSDGAVDDR---KRRKPLGDEGNDFD-ELKKSKMHDMSHS 120
           DFLR++VS+VPDYGH    GH D  +DDR   KRRKP+ DE ND D E KKSK  ++  +
Sbjct: 78  DFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVNDSDEEYKKSKTQEIGSA 137

Query: 121 S----GGRGRGRGRGRGRGRPARSAERDNFQPNPDADPCSSIENRNKNHPNPDVHMDHHV 180
                GGRGRGRGRGRG GR A++AER+      +      +E  N   P P+ ++  H 
Sbjct: 138 KTSGRGGRGRGRGRGRG-GRAAKAAEREGLNREME------VEAANSGQPPPEDNVKMHA 197

Query: 181 EPSE-----------TSKEVGEANQPVQS------FDLNADVIANEDSKTVVAAAAVSDT 240
             S            T+    +  Q +QS      FDLNA+ +   ++K   A    + T
Sbjct: 198 SESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGIDFDLNAESLDLNETKLAPATGTTTTT 257

Query: 241 PVESAGPTITESEAKAADEFVDKMAIDPLQYAHLSSTRVEEEEEDYDEE 261
                    T+SE  +    +D   +DP Q A L   R++E+EEDYDEE
Sbjct: 258 ------TAATDSEEYSGWPMMDISKMDPAQLASLGK-RIDEDEEDYDEE 292

[Close]

BLAST of MS004308 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 7.1e-38
Identity = 111/270 (41.11%), Postives = 156/270 (57.78%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           MQ DE+VGKIA+AVP+LVSKALELFLQDLC+ TY++TL RGAKT+N+ HLK CVQ+ +VF
Sbjct: 18  MQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNAFHLKQCVQATNVF 77

Query: 61  DFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRG-RG 120
           DFLRD V++VPD G   ++     ++R+   G   ND D +K ++MH++ H+S GRG RG
Sbjct: 78  DFLRDTVAKVPDLGGSDTEDQSATKRRKVVDGSSCNDEDMIKTTQMHEVKHTSCGRGRRG 137

Query: 121 RGRGRGRGRPARSA----ERDNFQPNPDADPCSSIENRNKNHPNPD-----VHMDHHVEP 180
           RGRGR  GR         E D    +P++    S EN + +H +        H +HH   
Sbjct: 138 RGRGRSSGRTGSGLSLKFEEDLEDGSPESSRTPSPENGSLSHDDTSWKKVASHNNHHSSN 197

Query: 181 SETSKEVGEANQPVQSFDLNADVIANEDSKTVVAAAAVSDTPVESAGPTITESEAKAADE 240
           SE           V++FDLN ++  N D+ T +      +T +E +     E        
Sbjct: 198 SEVK---------VRNFDLNVELDENGDNATWL------ETQLERSPDYPLE-------- 257

Query: 241 FVDKMAIDPLQYAHLSSTRVEEEEEDYDEE 261
            +++M IDP      S++    +EEDYDEE
Sbjct: 258 -INEMKIDPDDQQQASAS----DEEDYDEE 259

[Close]

BLAST of MS004308 vs. TAIR 10
Match: AT1G56170.1 (nuclear factor Y, subunit C2 )

HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06
Identity = 28/84 (33.33%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           M+ADEDV  I+   PV+ +KA E+F+ +L  R +  T +   +T+    +   +    VF
Sbjct: 86  MKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVF 145

Query: 61  DFLRDIVSR--VPDYGHGHSDGAV 83
           DFL DI+ R  + + G G + G +
Sbjct: 146 DFLVDIIPRDELKEEGLGVTKGTI 169

[Close]

BLAST of MS004308 vs. TAIR 10
Match: AT1G56170.2 (nuclear factor Y, subunit C2 )

HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06
Identity = 28/84 (33.33%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           M+ADEDV  I+   PV+ +KA E+F+ +L  R +  T +   +T+    +   +    VF
Sbjct: 86  MKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVF 145

Query: 61  DFLRDIVSR--VPDYGHGHSDGAV 83
           DFL DI+ R  + + G G + G +
Sbjct: 146 DFLVDIIPRDELKEEGLGVTKGTI 169

[Close]

BLAST of MS004308 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 48.9 bits (115), Expect = 7.2e-06
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 1   MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVF 60
           M+ADEDV  I+   PV+ ++A E+F+ +L  R++  T +   +T+    +   V    +F
Sbjct: 90  MKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIF 149

Query: 61  DFLRDIVSR 70
           DFL DIV R
Sbjct: 150 DFLVDIVPR 158

The following BLAST results are available for this feature:

BLAST of MS004308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139253.1	4.1e-136	98.85	dr1-associated corepressor isoform X2 [Momordica charantia]	[more]
XP_022139252.1	4.1e-136	98.85	dr1-associated corepressor isoform X1 [Momordica charantia]	[more]
XP_038891962.1	5.0e-118	87.31	uncharacterized protein LOC120081293 [Benincasa hispida]	[more]
XP_008445943.1	3.2e-117	86.57	PREDICTED: dr1-associated corepressor [Cucumis melo] >KAA0034126.1 dr1-associate...	[more]
TYK15793.1	3.2e-117	86.57	dr1-associated corepressor [Cucumis melo var. makuwa]	[more]

BLAST of MS004308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2YDP3	1.1e-14	34.46	Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1	[more]
Q9D6N5	1.1e-14	33.90	Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=3	[more]
Q14919	1.8e-14	35.03	Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3	[more]
A0JPP1	1.8e-14	33.33	Dr1-associated corepressor OS=Rattus norvegicus OX=10116 GN=Drap1 PE=2 SV=1	[more]
Q10315	3.1e-14	54.17	Transcription regulator complex subunit bur6 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of MS004308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDG1	2.0e-136	98.85	dr1-associated corepressor isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1CF91	2.0e-136	98.85	dr1-associated corepressor isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5D3CVA8	1.6e-117	86.57	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7SW18	1.6e-117	86.57	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BDV9	1.6e-117	86.57	dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488818 PE=4 SV=1	[more]

BLAST of MS004308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12480.1	3.0e-52	48.44	nuclear factor Y, subunit C11	[more]
AT5G19490.1	7.1e-38	41.11	Histone superfamily protein	[more]
AT1G56170.1	4.2e-06	33.33	nuclear factor Y, subunit C2	[more]
AT1G56170.2	4.2e-06	33.33	nuclear factor Y, subunit C2	[more]
AT1G08970.4	7.2e-06	36.23	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..69 e-value: 2.1E-21 score: 78.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 1..70
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 1..54 e-value: 2.1E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..115
None	No IPR available	PANTHER	PTHR10252:SF98	HISTONE SUPERFAMILY PROTEIN	coord: 1..260
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 1..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004308.1	MS004308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046982	protein heterodimerization activity