MS004293 (gene) Bitter gourd (TR) v1

Overview


Name	MS004293
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	THO complex subunit 1
Location	scaffold92: 1575234 .. 1585448 (+)
RNA-Seq Expression	MS004293
Synteny	MS004293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTTTATTCAGGAAGAGTTCCGGAAGGCCATATTGCAAACGGGGCCACCAGAAAATTTTGCTCTGCAGACAGTTCAAGAAGTTATCAGACCTCAGGTAGCTACTAGCTACACTGTAATCATCGGACTACTTGTATGGCATATGCAAATAACATATCACAAGTTCATAGAGTATTGAATATTTTAGAGTCAGATATAAAGTGCAAATTTGACCAATAAATTTAGAGTTAGAAGTTTTTAGGTTCTGTGAGTGTTGGGGGCTCTGTTCTGGTTTGTTTTTTCTCTTTGGATTATTTTGTTTTGGTTGATCATTTGTTTGTGTTTGTGTGTGTGTGTGTGTGTTATTTTTTTGTTCTCTCTTTTTCAATAAGAGACACAAAGATTTCATTACTCAAAGAGTACACAAAAAAAGACAGGGGACATGGCATCTCCTCCAGCTTCCCAAGCACTCAAGAATTGGGGATCAATAAAGGGTCCAATTCAACAATAAGTACAGTCAAGCATGCTGGCTCCCTTCCCTCCTTGTCGTTTTCCTACAATCTTATTTTTCTCCCAGTAAAATTTTCCCATTTCCTTGGGAACCTTAAAGATGGTTAGAAATTAAGTAGAGATGTTTGATAAACCGCTTAGGTTTAGAGTTAATTGTGCCCTTTGGAGCATGAGGATTCCTTCCACTTGAATGATTATACGAGTGAACTAATGACCATGAACACCATTTTTTGATTGATTAGTTTTCCTATAAGTGGAAACGTCAGAATTTTCAAGATTGATATCATATTTCCTAAGGGGCTGGGGTAAATTGAGAGAGAATGGGTTCAAACTTATGATGGCCACCTACCTTAGAATAAATTTCTATGTGTTTTCCGGCACCAAATGTTGTAGGGTCAAGCGGCTGCTCCATGAGATTAGTCCAGGGGCGCGTAAGTTGGCCCGGACACTCACAGATATAAAGAAAAGTCATATTTCCTAAGTATGGAGACCGAGGTATTTGAATCGAGAGGATAAGAGATTTTTTACCCGTCATGAGCGTCCTTGGAGCATGTTTAGTCTTTGACTAGGTTCAATACCCTTTTTGGGGTGTCCAATTCTAAGGAGCTTTGTAACTATCCTTTGTCACTTATTCTTGTCGAGTGGAGCTCTTTTTTTTAAACTCCAGTTTTAAGTTTTTTTTTTTAATTTTTTTTTTATTTTTTTGTATAGGTTTCTTTTGTTTTTTAGGTCCATTTGTACACTTTCAGTTATCTTAATAAATGCTTTGTTTATTTAAAAAAAGAAAAACAAAATTTCAATTCTTATATATATATATATATAAAACAACTAAAAGTGTTTATTTTGTTGTCAGTTCTTATTATCAGATTCTTTTTAATTTTCACTTGACAGAAGCACACGAAATTGGCACAAGATGAAAATCAGTTGCTGGAAAATATTCTACGTCGATTACTTCAAGAATTGGTGGTAAGTTACACTATGAAGCTTCATTAATTGAGATTTAGGTTTCATTAATCATGCATATGACAATTTGGATATCATTCTTCAGCCTCACATTTGGATTTTCTATTACTTCTTGCAAATAAGTTTATTTTCAATTGGATATTGGTGCAGTCATCTGCAGTTCAATCAGCGGAGCCAACAATGCAGTATGGGATGTCTATTGATGACAAGGAAACTTCACAGGGTCACATTCCTCGTCTTCTTGGTATTACATATTCTTAGAGTCAAACTTTTTGTTGTAGCCTAGTGATCTGATTTTTAATTTTTTATGGTATGATTTATGAATTGGTGTAGGTTTTTTTTTTTGTTTTGTGCATTTAAAATAAGTAGTAAATTTGAATTATTAATTTATGACCATTCCAAATAAATCGATACCTTAGAAGCAGAAAAAAAATTCAGAACGAGATGACATGAAGATAAATGGAAGTACAAGAAAGCTGTAAGAAAATGTACTAGCATGAAATGAAGTCACCATATTCTTCTACATTATGAAGTTATAATCATAGGAAAAATGCCAAAGCCATTCAGCATCCTTCAATTTCTTTTGGAAGCATGAATGAGTGATCTTCTGTAGATAAAGTGGGAACCTACGATTTATTGTCATGTTAACTTGACAATTAAACCCACTTGCATCATGAGTTTCACGGACTCCATCTTTAATAAAAACTTGTATGCTTTTTCTTGCAACTGAGCACCTATACCCCATCTTTGATTGAAACATTGGATTCTTTTTCTTCAAATCTTTCTTTAATATTCAAGTTTGATGGCTGGGTTGTAATGCAAATTTTTGAACATTCATTGATGCATCTTCTTTTGGCAATAGCCAATAATTATCTAGTTTTGGCCTCGTATTTTAGTTTGTCTGAAGATTTTACTGCATTGGAGCTGCATTAGTGATGAAAATGTTTATATCTAGTCTTGGGCACTTTTTAATCATTTTAATGCGTTCATTCTTGCCTTAGACATTGTCCTATATCTTTGTGAGAAAGAGCATGTTGAAGGAGGCATGATATTCCAGCTGTTAGAGGATCTGACTGAAATGTCAACGTTGAGGAACTGCAAAGATATTTTTGGTTACATTGAGAGTAAACAAGATATATTGGGAAAGGTTTCCTCTTGTTACCTGCACAAAACTTTTCATTTTTCTTTTAAATAAAATTTGAACCCCTATATTCTCTCTAACTTCATTTGCTTTGAAATGGCATGGCTTTTTTGTAACCAGCAAGAGCTTTTTGCACGTGGAAAACTTGTGATGTTGAGAACGTGCAATCAGTTGCTCCGTCGTCTATCAAAGGTACTATAATGAATTGCAAGAACCTGAGGAGGTTTTTTTTTCTTTTTTTTTCCTCTCCTAATAAAAGAAAACAAGAACAAACCTTTCATTGATATCTAAGAACTTCCCTTTCTCCCTCCCAACCAACCCAATTTGTGTTAATAACAAACAAATTATAAATACAAAACTTGAAGGCCCAACAAGAGGCATGAAACTTTTCTAATTCGAGTACCTCTCACCAATCTTTTTCCTCTTTGTTAAAAATATTTGCTATTCCTTTCCAGCCAATTCTCCACAAGTAGATTTGACAGCATTGAGCCATAGCTTTAGCACCTTGTTAGTTAATAATCAAATGGTTGTAAGCCCCCAAGGGGCAGGCGAGTTGGCAATAGCTTGGGGTCTCTTGGTCATACTGACTTAGAGGTCTCAAGTTCGAACCTTCTGGTGAACTTAATACCAAAAATCCTTGATGTTTCCTGGGTTCGAGTCTTGAGACGGGCGCGGGTGCCCCTGGGTATAGGGAAGCAAAGCTCCGAGTCCTAGTTATAAAAAAAAAAAATCAAATGGTTGTGTGATGAAATCTGAAAACACGACTGGTTGTCACCAGAACAAGCAAACAGGATACTGATTTGACAAAAAAAAAAGGAACATAAACACATACATAATTAATTTCTGTCTATAGATTGTTAAGCTTATCCTTAAGGCCAACTTATATTTATTTGCTCATAAAAAGAATATATGCAGGAAAATTTGTGTTCACTTTGATTCATGATCAACAGTTCTTATTAGAAAATAATTTTGCCAATCAGCAGATGGTTGAGCCATAGCTCTTTCTCTCTCTCTCTCTCTTGTAAAAGAATTAATTATGGTACAAATTTCTTGATTTGAATTTATAGGCAAGTGATGTGGTGTTTTGTGGACGCATTCTGATGTTTCTGGCACATTTTTTCCCTTTATCTGAACGTTCTGGTATGTGTTTCAGACACTCATCTCCATATTGTAATGTTATTTTTAATTTTTTTTTTCATATATATTGTTCTCTTGATCTATTGTTGCAGCTGTAAATATAAAAGGAGTGTTTAACACCTCCAATGAAACAAAATACGAGAAAGAACCCCCTGATGGTATGCTATTGCAGTGTTTAATCTTTGCTTTGATGCCAATGTTCTTTTCATTCTAGAAGATCAAAGTACTGGAGTATCTTTTGCTCCTTTCATGCTTTTATTTATTTTTAAATATAGAGCAAGACTCAAGCTTGTGATATTCCATTTCTTTGTTTTCAGGATTTTCTATTGATTTCAACTTTTACAAGACATTTTGGAGTTTACAGGTAATGTTGGAACATAAAGTGGTGGTCTGTGGGTGTTTTGGGTTTCTGGTTTGAGAAAATTGCCTCTCATCTTTGAAGCCGATTCTGGAAGTCTTGTCCATATAGAATTTCTCTAACCTTTTCATATACAGCCAGGATTGATCTTTTAAAATTCACTTGGAATTATCAATATTGTAGCAAAAAAAAGATTTCAGACCATGCTCGTTCTAAGTATTACAATGTTTTTAGTGATGTCAGTAGATGATATCTGAACATTTTTTTTTCTTCTTTCTATTCATATCAGCATTGTAAATAGAGGTTATTACGTAAGTACTAGTGTTCTTAGCCATGATAGGCAGAAATTATTGGTCAGTTTGAATTTTGACCGAATGAACATGCTCTTCTTTTAATTATATAGTTATGAATTTTTAGAAGTACATGCATAATACACAGTCTACTAATTAATTTCATTAAATAGTATAACTATCTCATGGACACACCTTATAATATTTCTGGTGCTAATGAAATTTTTTTTGTGAAATTTAAATGTATCAATTCTTGGGTAATCATACTGAAAATTTCAATGTATATTCTTGTCCAGGAATACTTCTGCAATCCTGCCTCCCTTTCTCTTGCTTCCACAAAGTGGCAAAAGTTTACGTCAAGTTTAATGGTATGATATAGCTTTTTGTTCTTGTCTATTATTATTACTATATAGAATTAGCTCGTGTGATTTTTTTTGTCCTTTAACTTATATATTGTGATATGTTTTACTTCCCAAATATATATATATCCAATGAAGTGAATTTCTTTTGGATTTTGCAACATAGATCGTGTTGAATACCTTTGATGCACAACCTTTGTCTGATGAAGAGGGAGATGCTAACATCTTAGAGGAAGAGGCTGCATCCTTCAGCATAAAATATCTTACTAGTAGTAAACTGATGAGTTTAGAGGTAAGTTCAATCTGAATTGTGTGATTATTACTATTGCATTGTATAGCTAGTCTGGGGTTTGGGTGTCCCTTTTGTTGGCCTTTTTGTTGGTATGCCCTTTAGTGTTTTTTTCATTTATTCTCAATGGAAGCAGGTTTTCTAATAAAAAATTTTTGTATGAATATTACTTATGTTGCATTTGTTATCTTTCTTCCGGGCAGTTGAAGGATCCAAGTTTTCGACGTCACGTTCTTGTGCAGTGCCTTATATTGTTTGATTATCTGAAGGTAATTTGTACGATGTATGTTTTATTTTTTATTTTTTAAATTCTTATGCAAACTTGTTTTTCTATAAGTTTGAAGTATTACTAATTAGTTCTTTTGTTGCTATACCATAGGCCCCGGGAAAGAATGAGAAAGACGTTCCTTCTGAAACCATTGTTAGTACCATATTGCTTTTTTAAGCCGTTGTAGATGTTCCGCACTCCCACTATCTTACTTGAATCCGAAATTACAAAATTCCTTGTTGATTTTAGCCATGAAATTAATTTCTAGAAATTATTCCTTTTTTTTTTTCCCAAAAAGATGAATATTCTATGTTATATTTTGTTGATTTGTTTAATTGGTATTGCTTATCAATAATATTAGATTTATAGCCTATCATTGTGGTAGACCCCTTTGTTTTTCTTTCGGATGATAAATGACCTACTTAAAAGTAAAAACCATTCCTGGTTAAATGCTACTTTGCTGCATTTTTCACCCCTGTTTCACAGCCAACAAAAACTCCTGTGGAGGTGTGTATTTTTCCTATGAGAACTTTCCAACATCAGCGTTGATGTGTCGGGGAGTGTCAATTTTATTTTATTAACTATAACGTGATAGCTAGATGCTGATACTGTATTGGTTCAAGTAAAATAAACTTTTCATTTTATCTTTTTCCTTCCGATTCATTTTAACTAACATAAAATGGTTGGATACTTTTAGCCCTCAAGGGGTAGCTTGGTTGGCAAGGCTTGAGGTCTCTTGGTCATACTGGTTTAGAGATCCCAAGTTTGAACCTTCATAATGAGCTTAATACTAAAAAAGCTTGATGTCTCCCACGTCCGGGCCTTGGGGCGGGCACGGGTACCCTTGGGTGTAGGGGAGCAAAGCTCCATCTCCCAGTTATCAAAAAAAAAAAAAAAAAGGTTGTATATTTTTCTTGGGGCGGGCACGGGTACCCTTGGGTGTAGGGGAGCAAAGCTCCGACTCCCAATTATAAAGAAAAAGGTTGTATATTTTTCTTTACCATTGTTGTGAGATGTCCTTCAGTCCAATTTCTGTCAACTTTTTTTTTTTTCTAATTCTAAATGAAAATAATAATATATATATTTTCTAAAAAATTATTTAAAATTCAGAGAGAAGAAATTAAATCTTGTGAGGAGCGTGTGAAGAAGTTGCTGGAGGTGACACCGCCTAAAGGGAAAGAATTCCTTCAGAAAATTGAGCATATATTAGAACGTGAAAATAACTGGGTGAGGATTGTTTTCACTCTCCTGCTTGTGACATTCTTGTTTTAAGCAATGACAATTTATAGCTTAAATGTTCTCCCAAATGTACTTGTAGGTATGGTGGAAGCGTGATGGTTGCCCTCCTTTTGAAAAGCAACCAACTGAGAAGAAAACCAGCAATGATGGAACTAAAAAACGGTATGGATTCTAATTAATGGACATAATGCACTCTCAAATTTTTTGGCGTGGTGGAACCAGGTTTCAGTTTTGTGTGGGCTAAATGTGTTTATAAATATTAAGGTTTTGAAACTAGTTTAGACAGAAGTTATCAGTATCTTTAAGTTGAAATTATGGAACACTTCTGTTTCCTATTAAAAAAAAAAGAAAAAGAAATTATGGAACACTTGAGGAGACGAAACATTGAAAGCTATTTTTTCAAAATAAGTTATTTATTCTCCATCTTTCTACAAAAATTATCTGAATAGTCTTCTCGGAAAGAAATAATTTTGTGAAAGAAGGGTAGAAAGATGATCAAGCCGTAGGTGACATCATTTTATATAACACAATTCATGAAGGAAAAAGGAAACAATTTGTTGCAGATGTACATCAACAGGAATAATGACAATTTAATTTAGGAAAATACTGATTATTTTCTCTTATTGAAAATAAATAGAGAAAAAAATTGCTTTTCTTCAAATAAAATTAGGTCTAATTTTATTCTTTGGATAAGAGCAAGCCTTTTTTTCTTAAACAGTCGAGAAGTTCAGATTACCTATTTGCATATTTTCAGTTTCATTACATCCCTTGTTTCTTATAAAAAAAAAGGTCTAAAATGTTTGATGTTGAGAAACTTATAGGATATTACTATTTTATGAAGGTGACCATTAAAGTTTTATTACCATGATTTTGAATGGATTTATATTTGCGACTCCCCGGTTTATTTAAAGGGATCTATAGTTAGACGTTCGATTGTCTGATGAAGTGTTTCCATGACATTCCATATTTCTCAATTTACATGATTGCATGTGCAGTTGGAATAACTATTGATGTATTCAAGTGAGGAGTCTTTTATCAATTCATTGAAAAATGATACAAAGCAGCCCAAAAGAGGGAAGGCTGGATAGGGAGACGTAACAGCCACGGTAACAATCTAACAGCCATTTTAACAAGTTACCTGCTGTAAATAGACTAACAATAGGTTACCGGCTGTAAAATAAAACCTGAAACCTATTAAACTTACAAGAACTTACCATAAAGTAATATAAGATCAAGATTACAACCAAGATCTAAAGAACTGACAAGAACTATTCAAGAGGGATGTTCCACGTCAACTATGGTCTTCCCCTTTTGATTTTAGGATGTCTAGTCATACTGTTTGCTGTGAAGACTTTTATACATGCATATATACAATATCATGTTTGAATGAATAGGTTGGTTCTTGTTGATTTTTTTCAAATGCTGAAAAATGATAAATATTAAGAATTGAGGTTGGTTCTTGGGGTTATCTTATTTTATTTTTTCAAATTCAATTTTTTTTTTGTAATTATCTTATTTTTTTATTATCGAAAGTTGAGGTTCCTTTTCGTAAGTTTTTTGTTCTCCCCACCTTTTGGCTTTGCCTTCTTTTAGGTGGGCCCTTTTTGTAGTCTTTTATTCATCTTAATGAAGGTCGGTTTTCTATTGAAAAAGTGATTTCCATGCCTGCCACTGTTATTCATCGGTTCGCCTTAAACTTTCTCCAGTAGGCCAAGGTGGAGACTGGGGAATAAAGAACTCTCTCAATTGTGGAAGTGGGCAGATCAAAATCCGGTGTGCAGTTGTCCCTTACCACTGGTTATTCTTGCTAGGAATTAATATTTATCTTATCTATATTCTATAGACTATAAATACTGGCAACATTTTTTATTACCTCAGAATGCCTTGACTGATCCTCAACGTGTCCGTACTCCTGCAATTTCAGAGTATTGGAAACCCTTGGCAGAAGATGTAAGCATATTAAGCACCTTGTTTTACACTTTGAGTTGAATAATCATACTGTTACCCATTTGTTCATTTAATTTTCAAATAAAAAGTAAATTACTATTAGGGTCAGTTGATCTTTTCCTTTGCAAAAAAACTACATATATATTGCACCTATTAGGATGAACTTCATTCCTTTTGTGTTTCAGATGGATGAGTCTGCTGGGATTGAAGCTGAATATCATCATAGAAATAATCGAGTAAGTTTTGGTTCATAGTATTGAATTCATTATCATGTCTTGCAGCTGTTAAATTGCTTAGGGTAGGTGGGTGTTTAGGAGAAGATAAGATATCAGATAGTATAAAAACTGTTTTAACCACATTTATAGCCATATGATCTTAGCTTTCTTCTTGGCGGGATGGTCTGGACCACATCTACTTTGTTGATACATTTCAAAAAGTTCAACAAGTGCCAAGATTTATTTATTCTATTGCAAATGACGAATGAACGACCACTCAACCTAAAAGCTTAAGTTGATAGGCTGAATAAGTTTAATTCATTTATGGATATCTAACACTTCCCTTCACTTGTGGGGTTAGATAATTACATAAAGGCCCAACAAGAGGAAACCATTATAAATGGGGAGGAAACAACAATATAGGAGTTCGAACACAAGACCTCCCGCTCTGATTGGATGCTAAGGATGAATAAACCACCACTCAACGCAAAAGCTTAAGCTGATGGGTTGGGTAAATTTAATTCATTTATGGATATCTAACATCTATTAATCGAAGAACATACTTCGATAAAAGTCGTATCATTAATTGTAAATCTCTTAACTCCGTATTGTTTGATATAGACTAATGAGATAACAACTCGACAATTACATTACTAATCATTTGGTATGTTTCTTCCTGATTCAGGTTTATTGCTGGAAAGGTCTTCGGTTCTCAGCTCGACAAGACTTGGAGGGATTCTCTCGAGTATGGTTTTAAATTGAATAAAAATTTTTAGGATTCGGTCTAATGAAGAAAATATAATCCTGATGAGTCAATGTGCAATTACAGTTCACCGACCATGGCATCGAAGGAGTCGTCCCTTTGGAACTCCTGCCACCTGATGTACGAGCCAAATACCAAGCTAAACCAAATGAGAGATCTAAACGTGCTAAGAAGGAAGAAACAAAAGGGTCTGTTCGTCAAGTCGAAGAAAATCAGGTAAAGTTCAGTTTACATGCATTTTAGTCGTACAAATCAAGAAAAAGCCCTTCCGAGGTAATGTCAGAATGTTTTTACTGGGTAAGCTGTGATCTCTATGGAGATTGTGTATATGAAATAACGTCAAAATATTGTTGTACTGTAAAACTATGGTCGTGGGGTCTTATGCACTTAAGTTTTCATTTTAATTTTTAGTATTGATATTCACTGCAGAAGTTATTATTTTCTAGGTTGTTTGTAACATTTTCTATAATTATCTTACCTATGGATTTTGGCAAAAGATGGCAACACCAGCAAGTGAGAATGATGGTGAAGGAACCAGAAGCGACCTTGATGGGCCATCAGCAGCCATGGATGTCGATACAACTGTAGCCGCTGGCAATGTATCTCAAGGTGGTACTCCAACTCCAGATGAAAATAAACAAAGCTCTGACACAGATATTGGTCAAGAGGCAGGCCAGTTGGAAGCTGACGCCGAGGTAGAGCCGGGCATGATTGATGGCGAGACGGATGCAGAGGTTGATTTGGATACTGCAGGT

mRNA sequence

CTTTTTTTTATTCAGGAAGAGTTCCGGAAGGCCATATTGCAAACGGGGCCACCAGAAAATTTTGCTCTGCAGACAGTTCAAGAAGTTATCAGACCTCAGAAGCACACGAAATTGGCACAAGATGAAAATCAGTTGCTGGAAAATATTCTACGTCGATTACTTCAAGAATTGGTGTCATCTGCAGTTCAATCAGCGGAGCCAACAATGCAGTATGGGATGTCTATTGATGACAAGGAAACTTCACAGGGTCACATTCCTCGTCTTCTTGACATTGTCCTATATCTTTGTGAGAAAGAGCATGTTGAAGGAGGCATGATATTCCAGCTGTTAGAGGATCTGACTGAAATGTCAACGTTGAGGAACTGCAAAGATATTTTTGGTTACATTGAGAGTAAACAAGATATATTGGGAAAGCAAGAGCTTTTTGCACGTGGAAAACTTGTGATGTTGAGAACGTGCAATCAGTTGCTCCGTCGTCTATCAAAGGCAAGTGATGTGGTGTTTTGTGGACGCATTCTGATGTTTCTGGCACATTTTTTCCCTTTATCTGAACGTTCTGCTGTAAATATAAAAGGAGTGTTTAACACCTCCAATGAAACAAAATACGAGAAAGAACCCCCTGATGGATTTTCTATTGATTTCAACTTTTACAAGACATTTTGGAGTTTACAGGAATACTTCTGCAATCCTGCCTCCCTTTCTCTTGCTTCCACAAAGTGGCAAAAGTTTACGTCAAGTTTAATGATCGTGTTGAATACCTTTGATGCACAACCTTTGTCTGATGAAGAGGGAGATGCTAACATCTTAGAGGAAGAGGCTGCATCCTTCAGCATAAAATATCTTACTAGTAGTAAACTGATGAGTTTAGAGTTGAAGGATCCAAGTTTTCGACGTCACGTTCTTGTGCAGTGCCTTATATTGTTTGATTATCTGAAGGCCCCGGGAAAGAATGAGAAAGACGTTCCTTCTGAAACCATTAGAGAAGAAATTAAATCTTGTGAGGAGCGTGTGAAGAAGTTGCTGGAGGTGACACCGCCTAAAGGGAAAGAATTCCTTCAGAAAATTGAGCATATATTAGAACGTGAAAATAACTGGGTATGGTGGAAGCGTGATGGTTGCCCTCCTTTTGAAAAGCAACCAACTGAGAAGAAAACCAGCAATGATGGAACTAAAAAACGTAGGCCAAGGTGGAGACTGGGGAATAAAGAACTCTCTCAATTGTGGAAGTGGGCAGATCAAAATCCGAATGCCTTGACTGATCCTCAACGTGTCCGTACTCCTGCAATTTCAGAGTATTGGAAACCCTTGGCAGAAGATATGGATGAGTCTGCTGGGATTGAAGCTGAATATCATCATAGAAATAATCGAGTTTATTGCTGGAAAGGTCTTCGGTTCTCAGCTCGACAAGACTTGGAGGGATTCTCTCGATTCACCGACCATGGCATCGAAGGAGTCGTCCCTTTGGAACTCCTGCCACCTGATGTACGAGCCAAATACCAAGCTAAACCAAATGAGAGATCTAAACGTGCTAAGAAGGAAGAAACAAAAGGGTCTGTTCGTCAAGTCGAAGAAAATCAGATGGCAACACCAGCAAGTGAGAATGATGGTGAAGGAACCAGAAGCGACCTTGATGGGCCATCAGCAGCCATGGATGTCGATACAACTGTAGCCGCTGGCAATGTATCTCAAGGTGGTACTCCAACTCCAGATGAAAATAAACAAAGCTCTGACACAGATATTGGTCAAGAGGCAGGCCAGTTGGAAGCTGACGCCGAGGTAGAGCCGGGCATGATTGATGGCGAGACGGATGCAGAGGTTGATTTGGATACTGCAGGT

Coding sequence (CDS)

CTTTTTTTTATTCAGGAAGAGTTCCGGAAGGCCATATTGCAAACGGGGCCACCAGAAAATTTTGCTCTGCAGACAGTTCAAGAAGTTATCAGACCTCAGAAGCACACGAAATTGGCACAAGATGAAAATCAGTTGCTGGAAAATATTCTACGTCGATTACTTCAAGAATTGGTGTCATCTGCAGTTCAATCAGCGGAGCCAACAATGCAGTATGGGATGTCTATTGATGACAAGGAAACTTCACAGGGTCACATTCCTCGTCTTCTTGACATTGTCCTATATCTTTGTGAGAAAGAGCATGTTGAAGGAGGCATGATATTCCAGCTGTTAGAGGATCTGACTGAAATGTCAACGTTGAGGAACTGCAAAGATATTTTTGGTTACATTGAGAGTAAACAAGATATATTGGGAAAGCAAGAGCTTTTTGCACGTGGAAAACTTGTGATGTTGAGAACGTGCAATCAGTTGCTCCGTCGTCTATCAAAGGCAAGTGATGTGGTGTTTTGTGGACGCATTCTGATGTTTCTGGCACATTTTTTCCCTTTATCTGAACGTTCTGCTGTAAATATAAAAGGAGTGTTTAACACCTCCAATGAAACAAAATACGAGAAAGAACCCCCTGATGGATTTTCTATTGATTTCAACTTTTACAAGACATTTTGGAGTTTACAGGAATACTTCTGCAATCCTGCCTCCCTTTCTCTTGCTTCCACAAAGTGGCAAAAGTTTACGTCAAGTTTAATGATCGTGTTGAATACCTTTGATGCACAACCTTTGTCTGATGAAGAGGGAGATGCTAACATCTTAGAGGAAGAGGCTGCATCCTTCAGCATAAAATATCTTACTAGTAGTAAACTGATGAGTTTAGAGTTGAAGGATCCAAGTTTTCGACGTCACGTTCTTGTGCAGTGCCTTATATTGTTTGATTATCTGAAGGCCCCGGGAAAGAATGAGAAAGACGTTCCTTCTGAAACCATTAGAGAAGAAATTAAATCTTGTGAGGAGCGTGTGAAGAAGTTGCTGGAGGTGACACCGCCTAAAGGGAAAGAATTCCTTCAGAAAATTGAGCATATATTAGAACGTGAAAATAACTGGGTATGGTGGAAGCGTGATGGTTGCCCTCCTTTTGAAAAGCAACCAACTGAGAAGAAAACCAGCAATGATGGAACTAAAAAACGTAGGCCAAGGTGGAGACTGGGGAATAAAGAACTCTCTCAATTGTGGAAGTGGGCAGATCAAAATCCGAATGCCTTGACTGATCCTCAACGTGTCCGTACTCCTGCAATTTCAGAGTATTGGAAACCCTTGGCAGAAGATATGGATGAGTCTGCTGGGATTGAAGCTGAATATCATCATAGAAATAATCGAGTTTATTGCTGGAAAGGTCTTCGGTTCTCAGCTCGACAAGACTTGGAGGGATTCTCTCGATTCACCGACCATGGCATCGAAGGAGTCGTCCCTTTGGAACTCCTGCCACCTGATGTACGAGCCAAATACCAAGCTAAACCAAATGAGAGATCTAAACGTGCTAAGAAGGAAGAAACAAAAGGGTCTGTTCGTCAAGTCGAAGAAAATCAGATGGCAACACCAGCAAGTGAGAATGATGGTGAAGGAACCAGAAGCGACCTTGATGGGCCATCAGCAGCCATGGATGTCGATACAACTGTAGCCGCTGGCAATGTATCTCAAGGTGGTACTCCAACTCCAGATGAAAATAAACAAAGCTCTGACACAGATATTGGTCAAGAGGCAGGCCAGTTGGAAGCTGACGCCGAGGTAGAGCCGGGCATGATTGATGGCGAGACGGATGCAGAGGTTGATTTGGATACTGCAGGT

Protein sequence

LFFIQEEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSAEPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDIFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTSSLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCLILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNWVWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVRTPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDGPSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAEVDLDTAG

Homology

[Close]

BLAST of MS004293 vs. NCBI nr
Match: XP_022139144.1 (THO complex subunit 1 [Momordica charantia])

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 604/607 (99.51%), Postives = 605/607 (99.67%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQT PPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA
Sbjct: 2   EEFRKAILQTVPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG
Sbjct: 482 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQE+GQLEADAEVEPGMIDGETDAE
Sbjct: 542 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQESGQLEADAEVEPGMIDGETDAE 601

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 602 VDLDTAG 608

[Close]

BLAST of MS004293 vs. NCBI nr
Match: XP_022945746.1 (THO complex subunit 1 [Cucurbita moschata] >XP_022945747.1 THO complex subunit 1 [Cucurbita moschata])

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 578/607 (95.22%), Postives = 595/607 (98.02%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQTGPPENFALQTVQ+VI+PQK TKLAQDENQLLENILRRLLQELVSSA QSA
Sbjct: 2   EEFRKAILQTGPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSIDD ETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPIMQYGMSIDDNETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASL+LASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SL +VLNTFDAQPLSDEEGDAN+LEEE+A+FSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLTVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSET+REEIKSCEERVKKLLEVTPP+GKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETLREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQP EKKT++D TKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHH++NRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVR+KYQAKPNERSKRAKKEETKG+VRQ EENQMATPASENDGEGTRSD DG
Sbjct: 482 VPLELLPPDVRSKYQAKPNERSKRAKKEETKGAVRQAEENQMATPASENDGEGTRSDPDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PS AMD DTTVAAG+VSQGGTPTP+ENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE
Sbjct: 542 PSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 601

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 602 VDLDTAG 608

[Close]

BLAST of MS004293 vs. NCBI nr
Match: XP_023542342.1 (THO complex subunit 1 [Cucurbita pepo subsp. pepo] >XP_023542343.1 THO complex subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 577/607 (95.06%), Postives = 595/607 (98.02%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQTGPPENFALQTVQ+VI+PQK TKLAQDENQLLENILRRLLQELVSSA QSA
Sbjct: 2   EEFRKAILQTGPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSIDD ETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPIMQYGMSIDDNETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASL+LASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SL +VLNTFDAQPLSDEEGDAN+LEEE+A+FSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLTVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSET+REEIKSCEERVKKLLEVTPP+GKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETLREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQP EKKT++D TKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHH++NRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVR+KYQAKPNERSKRAKKEETKG++RQ EENQMATPASENDGEGTRSD DG
Sbjct: 482 VPLELLPPDVRSKYQAKPNERSKRAKKEETKGAMRQAEENQMATPASENDGEGTRSDPDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PS AMD DTTVAAG+VSQGGTPTP+ENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE
Sbjct: 542 PSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 601

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 602 VDLDTAG 608

[Close]

BLAST of MS004293 vs. NCBI nr
Match: KAG6573787.1 (THO complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012863.1 THO complex subunit 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 577/606 (95.21%), Postives = 594/606 (98.02%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQTGPPENFALQTVQ+VI+PQK TKLAQDENQLLENILRRLLQELVSSA QSA
Sbjct: 2   EEFRKAILQTGPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSIDD ETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPIMQYGMSIDDNETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASL+LASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SL +VLNTFDAQPLSDEEGDAN+LEEE+A+FSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLTVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSET+REEIKSCEERVKKLLEVTPP+GKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETLREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQP EKKT++D TKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHH++NRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVR+KYQAKPNERSKRAKKEETKG+VRQ EENQMATPASENDGEGTRSD DG
Sbjct: 482 VPLELLPPDVRSKYQAKPNERSKRAKKEETKGAVRQAEENQMATPASENDGEGTRSDPDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PS AMD DTTVAAG+VSQGGTPTP+ENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE
Sbjct: 542 PSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 601

Query: 606 VDLDTA 612
           VDLDTA
Sbjct: 602 VDLDTA 607

[Close]

BLAST of MS004293 vs. NCBI nr
Match: XP_022966961.1 (THO complex subunit 1 [Cucurbita maxima] >XP_022966962.1 THO complex subunit 1 [Cucurbita maxima])

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 575/607 (94.73%), Postives = 593/607 (97.69%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQT PPENFALQTVQ+VI+PQK TKLAQDENQLLENILRRLLQELVSSA QSA
Sbjct: 2   EEFRKAILQTAPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSIDD ET+QGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPIMQYGMSIDDNETAQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASL+LASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SL +VLNTFDAQPLSDEEGDAN+LEEE+A+FSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLAVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSET+REEIKSCEERVKKLLEVTPP+GKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETMREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQP EKKT++D TKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHH++NRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVR+KYQAKPNERSKRAKKEETKG+VRQ EENQMATPASENDGEGTRSD DG
Sbjct: 482 VPLELLPPDVRSKYQAKPNERSKRAKKEETKGAVRQAEENQMATPASENDGEGTRSDPDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PS AMD DTTVAAG+VSQGGTPTP+ENKQSSDTDIGQEAGQLEADAEVEPGMIDGE DAE
Sbjct: 542 PSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGEIDAE 601

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 602 VDLDTAG 608

[Close]

BLAST of MS004293 vs. ExPASy Swiss-Prot
Match: Q93VM9 (THO complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=THO1 PE=1 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 8.1e-263
Identity = 453/603 (75.12%), Postives = 514/603 (85.24%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           + FR AILQ  P E FAL+TVQ  I+PQK TKLAQDENQ+LEN+LR LLQELV++A QS 
Sbjct: 2   DAFRDAILQRAPIETFALKTVQHFIQPQKQTKLAQDENQMLENMLRTLLQELVAAAAQSG 61

Query: 66  EPTMQYGMSIDDKETS---QGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNC 125
           E  MQYG  IDD +      G IP LLD+VLYLCEKEHVEGGMIFQLLEDLTEMST++NC
Sbjct: 62  EQIMQYGQLIDDDDDDDDIHGQIPHLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNC 121

Query: 126 KDIFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPL 185
           KD+FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKA+DVVFCGRILMFLAHFFPL
Sbjct: 122 KDVFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPL 181

Query: 186 SERSAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQK 245
           SERSAVNIKGVFNTSNETKYEK+PP G S+DFNFYKTFWSLQEYFCNPASL+ ASTKWQK
Sbjct: 182 SERSAVNIKGVFNTSNETKYEKDPPKGISVDFNFYKTFWSLQEYFCNPASLTSASTKWQK 241

Query: 246 FTSSLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLV 305
           F+SSL +VLNTFDAQPLS+EEG+AN LEEEAA+F+IKYLTSSKLM LELKD SFRRH+L+
Sbjct: 242 FSSSLAVVLNTFDAQPLSEEEGEANSLEEEAATFNIKYLTSSKLMGLELKDSSFRRHILL 301

Query: 306 QCLILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERE 365
           QCLI+FDYL+APGKN+KD+PSET++EE+KSCE+RVKKLLE+TPPKGKEFL+ +EHILERE
Sbjct: 302 QCLIMFDYLRAPGKNDKDLPSETMKEELKSCEDRVKKLLEITPPKGKEFLRAVEHILERE 361

Query: 366 NNWVWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQ 425
            NWVWWKRDGCPPFEKQP +KK+ N G KKRR RWRLGNKELSQLW+WADQNPNALTD Q
Sbjct: 362 KNWVWWKRDGCPPFEKQPIDKKSPNAGQKKRRQRWRLGNKELSQLWRWADQNPNALTDSQ 421

Query: 426 RVRTPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGI 485
           RVRTP I++YWKPLAEDMD SAGIE EYHH+NNRVYCWKGLRF+ARQDLEGFSRFT+ GI
Sbjct: 422 RVRTPDIADYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGLRFTARQDLEGFSRFTEMGI 481

Query: 486 EGVVPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSD 545
           EGVVP+ELLPP+VR+KYQAKPNE++KRAKKEETKG   + E NQ+    SE + EG R D
Sbjct: 482 EGVVPVELLPPEVRSKYQAKPNEKAKRAKKEETKGGSHETEGNQIGVSNSEAEAEGGRGD 541

Query: 546 LDGPSAAMDVDTTVAAGNVSQGGTPTPDENKQ--SSDTDIGQEAGQLEADAEVEPGMIDG 604
            +     M+ D            TPTP+E ++   SDT+ GQEAGQ+E     E G++D 
Sbjct: 542 AE----TMESDAI--------ADTPTPEEQQRLGGSDTENGQEAGQIEDGETEEAGLMDT 592

[Close]

BLAST of MS004293 vs. ExPASy Swiss-Prot
Match: Q96FV9 (THO complex subunit 1 OS=Homo sapiens OX=9606 GN=THOC1 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-55
Identity = 153/468 (32.69%), Postives = 220/468 (47.01%), Query Frame = 0


Query: 107 FQLLEDLTEMSTLRNCKDIFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDV 166
           F LL D+ +   L  C  IF ++E           ++ GK  +LR CN LLRRLSK+ + 
Sbjct: 94  FVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNT 153

Query: 167 VFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKY------------------------ 226
           VFCGRI +FLA  FPLSE+S +N++  FN  N T +                        
Sbjct: 154 VFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVE 213

Query: 227 -----EKEPPDGFS--IDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTSSLMIVLNTFD 286
                ++E P   S  ID+N Y+ FWSLQ+YF NP         W+ F      VL  F 
Sbjct: 214 EGEMGDEEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQ-CYEKISWKTFLKYSEEVLAVFK 273

Query: 287 AQPLSDEEGDANILEEEAAS----FSIKYLTSSKLMSLELKDPSFRRHVLVQCLILFDYL 346
           +  L D +     +EE        +  K+LTS KLM L+L D +FRRH+L+Q LILF YL
Sbjct: 274 SYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYL 333

Query: 347 K--APGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNWVWWK 406
           K     K+   V ++     I+   + V +LL   PP G+ F + +EHIL  E NW  WK
Sbjct: 334 KGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWK 393

Query: 407 RDGCPPFEKQPT---------EKKTSNDGTKKRRPRWR--LGNKELSQLWKWADQNPNAL 466
            +GCP F K+ T          K+T+ +    + P  +  +GN+EL++LW     N  A 
Sbjct: 394 NEGCPSFVKERTSDTKPTRIIRKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEAC 453

Query: 467 TDPQRVRTPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFT 526
               R   P + E+++   E  D    +E EY   NN  Y W+ LR  AR+    F    
Sbjct: 454 KSETREHMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTN 513

[Close]

BLAST of MS004293 vs. ExPASy Swiss-Prot
Match: Q8R3N6 (THO complex subunit 1 OS=Mus musculus OX=10090 GN=Thoc1 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.0e-55
Identity = 150/468 (32.05%), Postives = 216/468 (46.15%), Query Frame = 0


Query: 107 FQLLEDLTEMSTLRNCKDIFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDV 166
           F LL D+ +   L  C  IF ++E           ++ GK  +LR CN LLRRLSK+ + 
Sbjct: 94  FVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNT 153

Query: 167 VFCGRILMFLAHFFPLSERSAVNIKGVFNTSNET-------------KYEKEPPDGFS-- 226
           VFCGRI +FLA  FPLSE+S +N++  FN  N T             K+ ++  +G    
Sbjct: 154 VFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVE 213

Query: 227 ----------------IDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTSSLMIVLNTFD 286
                           ID+N Y+ FWSLQ+YF NP         W+ F      VL  F 
Sbjct: 214 EGEMGDDEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQ-CYEKISWKTFLKYSEEVLAVFK 273

Query: 287 AQPLSDEEGDANILEEEAAS----FSIKYLTSSKLMSLELKDPSFRRHVLVQCLILFDYL 346
           +  L D +     +EE        +  K+LTS KLM L+L D +FRRH+L+Q LILF YL
Sbjct: 274 SYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYL 333

Query: 347 K--APGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNWVWWK 406
           K     K+   V ++     I+   + V +LL   PP G+ F + +EHIL  E NW  WK
Sbjct: 334 KGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWK 393

Query: 407 RDGCPPFEKQPTEKKTSNDGTKKR-----------RPRWRLGNKELSQLWKWADQNPNAL 466
            +GCP F K+           +KR             +  +GN+EL++LW     N  A 
Sbjct: 394 NEGCPSFVKERASDTKPTRVVRKRAAPEDFLGKGPNKKILIGNEELTRLWNLCPDNMEAC 453

Query: 467 TDPQRVRTPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFT 526
               R   P + E+++   E  D    +E+EY   NN  Y W+ LR  AR+    F    
Sbjct: 454 KSETREYMPTLEEFFEEAIEQADPENMVESEYKAVNNSNYGWRALRLLARRSPHFFQPTN 513

[Close]

BLAST of MS004293 vs. ExPASy Swiss-Prot
Match: Q9URT2 (Uncharacterized protein P25A2.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCP25A2.03 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.2e-28
Identity = 135/494 (27.33%), Postives = 217/494 (43.93%), Query Frame = 0


Query: 107 FQLLEDLTEMSTLRNCKDIFGYIESKQDILGKQELFARGK-LVMLRTCNQLLRRLSKASD 166
           F +LE+L ++ T+  C  ++ Y E++  ++ K  +  RG+  V+LR  N+LLRRLS+  +
Sbjct: 103 FLILEELMDIHTVNECAKLYEYFETRPSLM-KGIVSNRGRGPVLLRISNELLRRLSRQEN 162

Query: 167 VVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNE-TKYEKEPPD---GFSIDFNFYK--- 226
             FCGRI + L+  FP  ERS  N++G +NT +   K E  PP        D +++K   
Sbjct: 163 SSFCGRIDILLSKAFPPEERSGANLRGDYNTVHSFGKVELSPPSTPISDRTDLSYHKKLN 222

Query: 227 ----TFWSLQEYFCNPASLSLASTKWQKFTSSL--------MIVLNTF---DAQPLSDEE 286
                +W LQ    NP  L LAS    KF  +          I+ NTF    + P  D  
Sbjct: 223 TLFTAYWDLQCMCSNPPKL-LASDTLPKFIDAAGSAIQAFESILQNTFFNGKSNPTIDPN 282

Query: 287 GDANILEEEAA---SFSIKYLTSSKLMSLELKDPSFRRHVLVQCLILFDYLKAPGKN--- 346
             + + E+       F  KY+ S  L   +L D  FR   ++Q +I+FD+L    K    
Sbjct: 283 SSSLLSEKYITLDKGFPSKYIYSRSLFEYQLSDEDFRLQAILQLIIIFDFLLDHSKERIE 342

Query: 347 ----EKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFL---------QKIEHILERENN 406
               EK      I   I S +E   KL E++  +   FL         + I+ I+  E N
Sbjct: 343 RRTLEKWTNKAVIPIVILS-DEDTSKLNELS-KEAYSFLHTARCGSVQRTIKEIIHIEGN 402

Query: 407 WVWWKRDGCPPFEKQPTEKKTSN---DGTKKR-----RPRWRLGNKELSQLWKWADQNP- 466
           W  WK  GCP  EK   +K   +   +G KK      + R+ +GN  LS+LW+ A +N  
Sbjct: 403 WKLWKGLGCPSLEKPLVDKAAIDEAVEGLKKLTNTPVKLRFAMGNAALSRLWEQAGENTL 462

Query: 467 NALTDPQRVRTPAISEYWKPLAEDMDESAGI----EAEYHHRNNRVYCWKGLRFSARQDL 526
           + L   +R R P+   +   +  D  E        +  +H ++     W+  R +    L
Sbjct: 463 DDLKKEERYRIPSPESFLSGVKADKFEIEEAVRDDDKHFHEQSLATKTWRAFRSAINSHL 522

Query: 527 EGFS-------RFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEE 539
           + FS           + IEG      + P +   +     E  +  ++ + + +V+   +
Sbjct: 523 QNFSDTGLGDVELLCNSIEGKPTTSKITPSIPPAFDIHIIEGEELLEEMKKRENVKHNSQ 582

[Close]

BLAST of MS004293 vs. ExPASy TrEMBL
Match: A0A6J1CC37 (THO complex subunit 1 OS=Momordica charantia OX=3673 GN=LOC111010121 PE=4 SV=1)

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 604/607 (99.51%), Postives = 605/607 (99.67%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQT PPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA
Sbjct: 2   EEFRKAILQTVPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG
Sbjct: 482 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQE+GQLEADAEVEPGMIDGETDAE
Sbjct: 542 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQESGQLEADAEVEPGMIDGETDAE 601

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 602 VDLDTAG 608

[Close]

BLAST of MS004293 vs. ExPASy TrEMBL
Match: A0A6J1G1S6 (THO complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111449893 PE=4 SV=1)

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 578/607 (95.22%), Postives = 595/607 (98.02%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQTGPPENFALQTVQ+VI+PQK TKLAQDENQLLENILRRLLQELVSSA QSA
Sbjct: 2   EEFRKAILQTGPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSIDD ETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPIMQYGMSIDDNETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASL+LASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SL +VLNTFDAQPLSDEEGDAN+LEEE+A+FSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLTVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSET+REEIKSCEERVKKLLEVTPP+GKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETLREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQP EKKT++D TKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHH++NRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVR+KYQAKPNERSKRAKKEETKG+VRQ EENQMATPASENDGEGTRSD DG
Sbjct: 482 VPLELLPPDVRSKYQAKPNERSKRAKKEETKGAVRQAEENQMATPASENDGEGTRSDPDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PS AMD DTTVAAG+VSQGGTPTP+ENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE
Sbjct: 542 PSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 601

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 602 VDLDTAG 608

[Close]

BLAST of MS004293 vs. ExPASy TrEMBL
Match: A0A6J1HPE8 (THO complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111466514 PE=4 SV=1)

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 575/607 (94.73%), Postives = 593/607 (97.69%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQT PPENFALQTVQ+VI+PQK TKLAQDENQLLENILRRLLQELVSSA QSA
Sbjct: 2   EEFRKAILQTAPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQSA 61

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSIDD ET+QGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 62  EPIMQYGMSIDDNETAQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 121

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 181

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASL+LASTKWQKFTS
Sbjct: 182 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFTS 241

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SL +VLNTFDAQPLSDEEGDAN+LEEE+A+FSIKYLTSSKLM LELKDPSFRRHVLVQCL
Sbjct: 242 SLAVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQCL 301

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKDVPSET+REEIKSCEERVKKLLEVTPP+GKEFLQKIEHILERENNW
Sbjct: 302 ILFDYLKAPGKNEKDVPSETMREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENNW 361

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGCPPFEKQP EKKT++D TKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 362 VWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 421

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           TPAISEYWKPLAEDMDESAGIEAEYHH++NRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 422 TPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 481

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVR+KYQAKPNERSKRAKKEETKG+VRQ EENQMATPASENDGEGTRSD DG
Sbjct: 482 VPLELLPPDVRSKYQAKPNERSKRAKKEETKGAVRQAEENQMATPASENDGEGTRSDPDG 541

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PS AMD DTTVAAG+VSQGGTPTP+ENKQSSDTDIGQEAGQLEADAEVEPGMIDGE DAE
Sbjct: 542 PSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGEIDAE 601

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 602 VDLDTAG 608

[Close]

BLAST of MS004293 vs. ExPASy TrEMBL
Match: A0A0A0KTL0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G407100 PE=4 SV=1)

HSP 1 Score: 1142.5 bits (2954), Expect = 0.0e+00
Identity = 568/607 (93.57%), Postives = 590/607 (97.20%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQ GPPENFALQ VQ+VIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQS 
Sbjct: 8   EEFRKAILQMGPPENFALQIVQDVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQST 67

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSID+KETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI
Sbjct: 68  EPVMQYGMSIDEKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 127

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 128 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 187

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEK+PPDGFSIDFNFYKTFWSLQE+FCNPASL+LASTKWQKFTS
Sbjct: 188 SAVNIKGVFNTSNETKYEKQPPDGFSIDFNFYKTFWSLQEFFCNPASLALASTKWQKFTS 247

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SLM+VLNTFDAQPLSDEEGDANILEEE+A+FSIKYLTSSKLM LELKDPSFRRHVL+QCL
Sbjct: 248 SLMVVLNTFDAQPLSDEEGDANILEEESATFSIKYLTSSKLMGLELKDPSFRRHVLMQCL 307

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKD+PSET+REEIKSCEERVKKLLEVTPP+GK+FLQKIEHIL+RENNW
Sbjct: 308 ILFDYLKAPGKNEKDIPSETMREEIKSCEERVKKLLEVTPPRGKDFLQKIEHILQRENNW 367

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGC PFEKQP EKKT ND TKKRRPRWRLGNKELSQLWKW+DQNPNALTDPQRVR
Sbjct: 368 VWWKRDGCAPFEKQPIEKKTINDVTKKRRPRWRLGNKELSQLWKWSDQNPNALTDPQRVR 427

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           +PAIS+YWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 428 SPAISDYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 487

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVRAKYQAKPNERSKRAKKEE KG+V+QV+ENQMATPASENDGEGTRSD DG
Sbjct: 488 VPLELLPPDVRAKYQAKPNERSKRAKKEEAKGAVQQVDENQMATPASENDGEGTRSDPDG 547

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PSA MDVDT +A GNVSQGG  TP+ENK SSDTDIGQEAGQLEADAEVEPGMIDGETDAE
Sbjct: 548 PSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 607

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 608 VDLDTAG 614

[Close]

BLAST of MS004293 vs. ExPASy TrEMBL
Match: A0A1S3CC63 (THO complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103499294 PE=4 SV=1)

HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 566/607 (93.25%), Postives = 588/607 (96.87%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           EEFRKAILQ GPPENFALQTVQ+VIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQS 
Sbjct: 8   EEFRKAILQVGPPENFALQTVQDVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQST 67

Query: 66  EPTMQYGMSIDDKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKDI 125
           EP MQYGMSID+KETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTL+NCKDI
Sbjct: 68  EPVMQYGMSIDEKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLKNCKDI 127

Query: 126 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 185
           FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER
Sbjct: 128 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSER 187

Query: 186 SAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQKFTS 245
           SAVNIKGVFNTSNETKYEK+ PDGFSIDFNFYKTFWSLQE+FCNPASL+LASTKWQKF  
Sbjct: 188 SAVNIKGVFNTSNETKYEKQLPDGFSIDFNFYKTFWSLQEFFCNPASLALASTKWQKFAC 247

Query: 246 SLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLVQCL 305
           SLM+VLNTFDAQPLSDEEGDANILEEE+A+FSIKYLTSSKLM LELKDPSFRRHVL+QCL
Sbjct: 248 SLMVVLNTFDAQPLSDEEGDANILEEESATFSIKYLTSSKLMGLELKDPSFRRHVLMQCL 307

Query: 306 ILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERENNW 365
           ILFDYLKAPGKNEKD+PSET+REEIKSCEERVKKLLEVTPP+GK+FLQKIEHIL+RENNW
Sbjct: 308 ILFDYLKAPGKNEKDIPSETMREEIKSCEERVKKLLEVTPPRGKDFLQKIEHILQRENNW 367

Query: 366 VWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 425
           VWWKRDGC PFEKQP EKKT ND TKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
Sbjct: 368 VWWKRDGCAPFEKQPIEKKTINDVTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR 427

Query: 426 TPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 485
           +PAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV
Sbjct: 428 SPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGV 487

Query: 486 VPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSDLDG 545
           VPLELLPPDVRAKYQAKPNERSKRAK+EE KG+V+QV+ENQMATPASENDGEGTRSD DG
Sbjct: 488 VPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQMATPASENDGEGTRSDPDG 547

Query: 546 PSAAMDVDTTVAAGNVSQGGTPTPDENKQSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 605
           PSA MDVDT +A GNVSQGG  TP+ENK SSDTDIGQEAGQLEADAEVEPGMIDGETDAE
Sbjct: 548 PSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQLEADAEVEPGMIDGETDAE 607

Query: 606 VDLDTAG 613
           VDLDTAG
Sbjct: 608 VDLDTAG 614

[Close]

BLAST of MS004293 vs. TAIR 10
Match: AT5G09860.1 (nuclear matrix protein-related )

HSP 1 Score: 907.5 bits (2344), Expect = 5.7e-264
Identity = 453/603 (75.12%), Postives = 514/603 (85.24%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           + FR AILQ  P E FAL+TVQ  I+PQK TKLAQDENQ+LEN+LR LLQELV++A QS 
Sbjct: 2   DAFRDAILQRAPIETFALKTVQHFIQPQKQTKLAQDENQMLENMLRTLLQELVAAAAQSG 61

Query: 66  EPTMQYGMSIDDKETS---QGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNC 125
           E  MQYG  IDD +      G IP LLD+VLYLCEKEHVEGGMIFQLLEDLTEMST++NC
Sbjct: 62  EQIMQYGQLIDDDDDDDDIHGQIPHLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNC 121

Query: 126 KDIFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPL 185
           KD+FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKA+DVVFCGRILMFLAHFFPL
Sbjct: 122 KDVFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPL 181

Query: 186 SERSAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQK 245
           SERSAVNIKGVFNTSNETKYEK+PP G S+DFNFYKTFWSLQEYFCNPASL+ ASTKWQK
Sbjct: 182 SERSAVNIKGVFNTSNETKYEKDPPKGISVDFNFYKTFWSLQEYFCNPASLTSASTKWQK 241

Query: 246 FTSSLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLV 305
           F+SSL +VLNTFDAQPLS+EEG+AN LEEEAA+F+IKYLTSSKLM LELKD SFRRH+L+
Sbjct: 242 FSSSLAVVLNTFDAQPLSEEEGEANSLEEEAATFNIKYLTSSKLMGLELKDSSFRRHILL 301

Query: 306 QCLILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERE 365
           QCLI+FDYL+APGKN+KD+PSET++EE+KSCE+RVKKLLE+TPPKGKEFL+ +EHILERE
Sbjct: 302 QCLIMFDYLRAPGKNDKDLPSETMKEELKSCEDRVKKLLEITPPKGKEFLRAVEHILERE 361

Query: 366 NNWVWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQ 425
            NWVWWKRDGCPPFEKQP +KK+ N G KKRR RWRLGNKELSQLW+WADQNPNALTD Q
Sbjct: 362 KNWVWWKRDGCPPFEKQPIDKKSPNAGQKKRRQRWRLGNKELSQLWRWADQNPNALTDSQ 421

Query: 426 RVRTPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGI 485
           RVRTP I++YWKPLAEDMD SAGIE EYHH+NNRVYCWKGLRF+ARQDLEGFSRFT+ GI
Sbjct: 422 RVRTPDIADYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGLRFTARQDLEGFSRFTEMGI 481

Query: 486 EGVVPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSD 545
           EGVVP+ELLPP+VR+KYQAKPNE++KRAKKEETKG   + E NQ+    SE + EG R D
Sbjct: 482 EGVVPVELLPPEVRSKYQAKPNEKAKRAKKEETKGGSHETEGNQIGVSNSEAEAEGGRGD 541

Query: 546 LDGPSAAMDVDTTVAAGNVSQGGTPTPDENKQ--SSDTDIGQEAGQLEADAEVEPGMIDG 604
            +     M+ D            TPTP+E ++   SDT+ GQEAGQ+E     E G++D 
Sbjct: 542 AE----TMESDAI--------ADTPTPEEQQRLGGSDTENGQEAGQIEDGETEEAGLMDT 592

[Close]

BLAST of MS004293 vs. TAIR 10
Match: AT5G09860.2 (nuclear matrix protein-related )

HSP 1 Score: 902.5 bits (2331), Expect = 1.8e-262
Identity = 453/603 (75.12%), Postives = 513/603 (85.07%), Query Frame = 0


Query: 6   EEFRKAILQTGPPENFALQTVQEVIRPQKHTKLAQDENQLLENILRRLLQELVSSAVQSA 65
           + FR AILQ  P E FAL+TVQ  I+PQK TKLAQDENQ+LEN+LR LLQELV++A QS 
Sbjct: 2   DAFRDAILQRAPIETFALKTVQHFIQPQKQTKLAQDENQMLENMLRTLLQELVAAAAQSG 61

Query: 66  EPTMQYGMSIDDKETS---QGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNC 125
           E  MQYG  IDD +      G IP LLD+VLYLCEKEHVEGGMIFQLLEDLTEMST++NC
Sbjct: 62  EQIMQYGQLIDDDDDDDDIHGQIPHLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNC 121

Query: 126 KDIFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPL 185
           KD+FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKA+DVVFCGRILMFLAHFFPL
Sbjct: 122 KDVFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPL 181

Query: 186 SERSAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLSLASTKWQK 245
           SERSAVNIKGVFNTSNETKYEK+PP G S+DFNFYKTFWSLQEYFCNPASL+ ASTKWQK
Sbjct: 182 SERSAVNIKGVFNTSNETKYEKDPPKGISVDFNFYKTFWSLQEYFCNPASLTSASTKWQK 241

Query: 246 FTSSLMIVLNTFDAQPLSDEEGDANILEEEAASFSIKYLTSSKLMSLELKDPSFRRHVLV 305
           F+SSL +VLNTFDAQPLS+EEG+AN LEEEAA+F+IKYLTSSKLM LELKD SFRRH+L+
Sbjct: 242 FSSSLAVVLNTFDAQPLSEEEGEANSLEEEAATFNIKYLTSSKLMGLELKDSSFRRHILL 301

Query: 306 QCLILFDYLKAPGKNEKDVPSETIREEIKSCEERVKKLLEVTPPKGKEFLQKIEHILERE 365
           QCLI+FDYL+APGKN+KD+PSET+ EE+KSCE+RVKKLLE+TPPKGKEFL+ +EHILERE
Sbjct: 302 QCLIMFDYLRAPGKNDKDLPSETM-EELKSCEDRVKKLLEITPPKGKEFLRAVEHILERE 361

Query: 366 NNWVWWKRDGCPPFEKQPTEKKTSNDGTKKRRPRWRLGNKELSQLWKWADQNPNALTDPQ 425
            NWVWWKRDGCPPFEKQP +KK+ N G KKRR RWRLGNKELSQLW+WADQNPNALTD Q
Sbjct: 362 KNWVWWKRDGCPPFEKQPIDKKSPNAGQKKRRQRWRLGNKELSQLWRWADQNPNALTDSQ 421

Query: 426 RVRTPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFTDHGI 485
           RVRTP I++YWKPLAEDMD SAGIE EYHH+NNRVYCWKGLRF+ARQDLEGFSRFT+ GI
Sbjct: 422 RVRTPDIADYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGLRFTARQDLEGFSRFTEMGI 481

Query: 486 EGVVPLELLPPDVRAKYQAKPNERSKRAKKEETKGSVRQVEENQMATPASENDGEGTRSD 545
           EGVVP+ELLPP+VR+KYQAKPNE++KRAKKEETKG   + E NQ+    SE + EG R D
Sbjct: 482 EGVVPVELLPPEVRSKYQAKPNEKAKRAKKEETKGGSHETEGNQIGVSNSEAEAEGGRGD 541

Query: 546 LDGPSAAMDVDTTVAAGNVSQGGTPTPDENKQ--SSDTDIGQEAGQLEADAEVEPGMIDG 604
            +     M+ D            TPTP+E ++   SDT+ GQEAGQ+E     E G++D 
Sbjct: 542 AE----TMESDAI--------ADTPTPEEQQRLGGSDTENGQEAGQIEDGETEEAGLMDT 591

The following BLAST results are available for this feature:

BLAST of MS004293 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139144.1	0.0e+00	99.51	THO complex subunit 1 [Momordica charantia]	[more]
XP_022945746.1	0.0e+00	95.22	THO complex subunit 1 [Cucurbita moschata] >XP_022945747.1 THO complex subunit 1...	[more]
XP_023542342.1	0.0e+00	95.06	THO complex subunit 1 [Cucurbita pepo subsp. pepo] >XP_023542343.1 THO complex s...	[more]
KAG6573787.1	0.0e+00	95.21	THO complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG70128...	[more]
XP_022966961.1	0.0e+00	94.73	THO complex subunit 1 [Cucurbita maxima] >XP_022966962.1 THO complex subunit 1 [...	[more]

BLAST of MS004293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VM9	8.1e-263	75.12	THO complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=THO1 PE=1 SV=1	[more]
Q96FV9	1.3e-55	32.69	THO complex subunit 1 OS=Homo sapiens OX=9606 GN=THOC1 PE=1 SV=1	[more]
Q8R3N6	5.0e-55	32.05	THO complex subunit 1 OS=Mus musculus OX=10090 GN=Thoc1 PE=1 SV=1	[more]
Q9URT2	5.2e-28	27.33	Uncharacterized protein P25A2.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]

BLAST of MS004293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC37	0.0e+00	99.51	THO complex subunit 1 OS=Momordica charantia OX=3673 GN=LOC111010121 PE=4 SV=1	[more]
A0A6J1G1S6	0.0e+00	95.22	THO complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111449893 PE=4 SV=1	[more]
A0A6J1HPE8	0.0e+00	94.73	THO complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111466514 PE=4 SV=1	[more]
A0A0A0KTL0	0.0e+00	93.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G407100 PE=4 SV=1	[more]
A0A1S3CC63	0.0e+00	93.25	THO complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103499294 PE=4 SV=1	[more]

BLAST of MS004293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09860.1	5.7e-264	75.12	nuclear matrix protein-related	[more]
AT5G09860.2	1.8e-262	75.12	nuclear matrix protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..56
None	No IPR available	COILS	Coil	Coil	coord: 323..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 521..536
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 556..582
None	No IPR available	PANTHER	PTHR13265:SF0	HPR1	coord: 6..590
IPR021861	THO complex, subunit THOC1	PFAM	PF11957	efThoc1	coord: 87..508 e-value: 3.3E-97 score: 326.2
IPR021861	THO complex, subunit THOC1	PANTHER	PTHR13265	THO COMPLEX SUBUNIT 1	coord: 6..590

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004293.1	MS004293.1	mRNA