MS004282 (gene) Bitter gourd (TR) v1

Overview


Name	MS004282
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor IIIA-like
Location	scaffold92: 1485626 .. 1487669 (-)
RNA-Seq Expression	MS004282
Synteny	MS004282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGCGACACGCAGGAGGATGTTGGAGAAGGCAAAACAAAAGATGGAAAATCCAATATATGCCCGGAATGTGGCGCTGCTTTCAAAAAGCCTGCTTACTTGAGGCAGCATATGCTAAGCCATTCGCTCGAGGTATTATAAGATATTTCCACTTATGGGGATGTTAATGCAGAAAATCTGTTTAACTTGTTGCTTGCCGGTGGACTTACTTGGTATATTTATGTTCATCATCCAAGGCCTTTAATAAGGTTGATATTACTTCTAGCAGTGTCTGATGACGAGATAAATTGTTATGTATAATCTACACACATGATTAAAGTTGGATGATTATTAGTTATCTAGGTGCTTGCTTTTGGTTCCATGTCCTTTTATTTTCTCATAAGTTGGTTTGAATTGTGTTCTGTTTTGTTTACTTGATTGTCTCAGTACCTCATCTGGTCGCCTTCTCCTTAGAAGGAAAATTTCTTTTTGTTTTAGCAGTCAATTGTCAGTGTTTGCCCTTTATATGTTGTGTCAGTTTGCATTTATTATGAATTGTTTAACGGTTCTTTGCTTTCTGAATACCTTCCTGTCAATTCACCATATTTTTTCATGCATTGAAGTTGACTAGTTTTGCAGGAACGAATTCTTAAATATATTAAAATAATGTGAAAGATCCTGGATATCTCAGCGTGAAGCATTGGATCCCACAATAAGAACTCCAAAATGCACGAGGCTGCATTTTCTTGCTTGAATGGATCAGTATCAGGTTGGGAGACCTCCTGAGAAGCTCCATCAAGTGGGCCTCGGTCACGCTACAGTATTTTGAGGTTTGAAGTCTAGTAATTGAGAATGTTGGGAAGAGACTTCTTATTTGAAAATTTCAGTTGACCAATTTTATTGCATTATTTTTCTGCAGAGGCCATACATCTGCTCAATAGATGGTTGTCAAGCCAGTTATAGAAGAAAGGATCATTTGACTCGCCACTTACTCCAACATCAAGGAAATGTATTCAAGTGTCCAATTGAGAGCTGCAGCAATGAATTTGCAAGTCAAGACAGTTTGAAAAGACACTTGAAAAATTTCCATGAAGATGATGCTCGTCCTGAAGCTAAATGTGAGAAGCAGTTTGTTTGTCCAGAAGATGGATGTGGAAAGGTGTTCAGATATGGATCTCAATTGCAAAAACATGAGGATTCCCATGGCAAGTTCCCATCTTTTTATTCTCTACTAAATTTTAACTGCTTGATTTAAGATATCAATGTATTTATTCAAATTTTACTTAACTGTAGTTAAGCTGGATTCAATAGAGGCATATTGTGCTGAACCGGGTTGCATGCGACCTTTCACCAACAAGCAATGTCTTAAGGCTCATATACAATCCTGTCACCAATATATTAAATGTGAGATATGTGGATCTGAAAAATTGAGGAAGAACATCAAACGACATCTACGTAAGCATGAAAGTGAAGGTCCACAAAAGACAATTCAATGCTCGCATGAGGGCTGTAGTAAAGTGTTTTCAACTGTAAGTAGCCCAGACTCTGTAAATTCCTTTATTGGTTTAACTACTTTTAGCTGGGCTATAAGGACTCCCAACGAATGCCATTATTGTTATTTAGACTGGATGGGATCTGATCTTTGATATGTTTCCTTGTTAATGATTCAGGATTCAAATCTCCGCCAACATATGAAGGTTGTGCACCTGGAACAAAAACCTTTTTCGTGTAGCTTTTCTGGTTGTGGCATGAGATTTGGGTACAGGCATGTTAGAGACAATCACGAGAGAAGTGGCCACCATGTTTACATTAATGTAAGTCTTGCATTGATAGAATTTCTATCTTTTCTTATAAAAGAAAACAGTTTGTATTCGTCTACTCCTGACGTCCAGAGAGATTATTTTAAAGAGCTGTGTTACTCTGAAATCAGGGGGATTTTGAAGTAGCTGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGGAAGTGTCCAACCGTTGAAATGCTCATACGAAAGAGGGTTACCCCCCCAAGTGAGTTGGACTTCATGTTGAAT

mRNA sequence

ATGGGGAGCGACACGCAGGAGGATGTTGGAGAAGGCAAAACAAAAGATGGAAAATCCAATATATGCCCGGAATGTGGCGCTGCTTTCAAAAAGCCTGCTTACTTGAGGCAGCATATGCTAAGCCATTCGCTCGAGAGGCCATACATCTGCTCAATAGATGGTTGTCAAGCCAGTTATAGAAGAAAGGATCATTTGACTCGCCACTTACTCCAACATCAAGGAAATGTATTCAAGTGTCCAATTGAGAGCTGCAGCAATGAATTTGCAAGTCAAGACAGTTTGAAAAGACACTTGAAAAATTTCCATGAAGATGATGCTCGTCCTGAAGCTAAATGTGAGAAGCAGTTTGTTTGTCCAGAAGATGGATGTGGAAAGGTGTTCAGATATGGATCTCAATTGCAAAAACATGAGGATTCCCATAAGATATCAATGTATTTATTCAAATTTTACTTAACTGTAGTTAAGCTGGATTCAATAGAGGCATATTGTGCTGAACCGGGTTGCATGCGACCTTTCACCAACAAGCAATGTCTTAAGGCTCATATACAATCCTGTCACCAATATATTAAATGTGAGATATGTGGATCTGAAAAATTGAGGAAGAACATCAAACGACATCTACGTAAGCATGAAAGTGAAGGTCCACAAAAGACAATTCAATGCTCGCATGAGGGCTGTAGTAAAGTGTTTTCAACTGATTCAAATCTCCGCCAACATATGAAGGTTGTGCACCTGGAACAAAAACCTTTTTCGTGTAGCTTTTCTGGTTGTGGCATGAGATTTGGGTACAGGCATGTTAGAGACAATCACGAGAGAAGTGGCCACCATGTTTACATTAATGGGGATTTTGAAGTAGCTGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGGAAGTGTCCAACCGTTGAAATGCTCATACGAAAGAGGGTTACCCCCCCAAGTGAGTTGGACTTCATGTTGAAT

Coding sequence (CDS)

ATGGGGAGCGACACGCAGGAGGATGTTGGAGAAGGCAAAACAAAAGATGGAAAATCCAATATATGCCCGGAATGTGGCGCTGCTTTCAAAAAGCCTGCTTACTTGAGGCAGCATATGCTAAGCCATTCGCTCGAGAGGCCATACATCTGCTCAATAGATGGTTGTCAAGCCAGTTATAGAAGAAAGGATCATTTGACTCGCCACTTACTCCAACATCAAGGAAATGTATTCAAGTGTCCAATTGAGAGCTGCAGCAATGAATTTGCAAGTCAAGACAGTTTGAAAAGACACTTGAAAAATTTCCATGAAGATGATGCTCGTCCTGAAGCTAAATGTGAGAAGCAGTTTGTTTGTCCAGAAGATGGATGTGGAAAGGTGTTCAGATATGGATCTCAATTGCAAAAACATGAGGATTCCCATAAGATATCAATGTATTTATTCAAATTTTACTTAACTGTAGTTAAGCTGGATTCAATAGAGGCATATTGTGCTGAACCGGGTTGCATGCGACCTTTCACCAACAAGCAATGTCTTAAGGCTCATATACAATCCTGTCACCAATATATTAAATGTGAGATATGTGGATCTGAAAAATTGAGGAAGAACATCAAACGACATCTACGTAAGCATGAAAGTGAAGGTCCACAAAAGACAATTCAATGCTCGCATGAGGGCTGTAGTAAAGTGTTTTCAACTGATTCAAATCTCCGCCAACATATGAAGGTTGTGCACCTGGAACAAAAACCTTTTTCGTGTAGCTTTTCTGGTTGTGGCATGAGATTTGGGTACAGGCATGTTAGAGACAATCACGAGAGAAGTGGCCACCATGTTTACATTAATGGGGATTTTGAAGTAGCTGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGGAAGTGTCCAACCGTTGAAATGCTCATACGAAAGAGGGTTACCCCCCCAAGTGAGTTGGACTTCATGTTGAAT

Protein sequence

MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKAHIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHMKVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKRKCPTVEMLIRKRVTPPSELDFMLN

Homology

[Close]

BLAST of MS004282 vs. NCBI nr
Match: XP_022139243.1 (transcription factor IIIA isoform X1 [Momordica charantia])

HSP 1 Score: 644.4 bits (1661), Expect = 5.1e-181
Identity = 304/324 (93.83%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           MGSDTQ+DV EGKTKDGKSNICPECGAAFKKPAYL+QHMLSHSLERPYICSIDGCQASYR
Sbjct: 43  MGSDTQQDVREGKTKDGKSNICPECGAAFKKPAYLKQHMLSHSLERPYICSIDGCQASYR 102

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRH KNFHEDDARPEAKCEKQFVCPE
Sbjct: 103 RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHWKNFHEDDARPEAKCEKQFVCPE 162

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           DGCGKVFRYGSQLQKHEDSH             VKLDSIEAYCAEPGCMRPFTNKQCLKA
Sbjct: 163 DGCGKVFRYGSQLQKHEDSH-------------VKLDSIEAYCAEPGCMRPFTNKQCLKA 222

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHM 240
           HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQK IQC HEGCSKVFSTDSNLRQHM
Sbjct: 223 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKIIQCPHEGCSKVFSTDSNLRQHM 282

Query: 241 KVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 300
           KVVHLEQKPF CSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR
Sbjct: 283 KVVHLEQKPFECSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 342

Query: 301 KCPTVEMLIRKRVTPPSELDFMLN 325
           KCPTVEMLIRKRVTPPSELDFMLN
Sbjct: 343 KCPTVEMLIRKRVTPPSELDFMLN 353

[Close]

BLAST of MS004282 vs. NCBI nr
Match: XP_022139244.1 (transcription factor IIIA isoform X2 [Momordica charantia])

HSP 1 Score: 631.3 bits (1627), Expect = 4.5e-177
Identity = 298/324 (91.98%), Postives = 300/324 (92.59%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           MGSDTQ+DV EGKTKDGKSNICPECGAAFKKPAYL+QHMLSHSLERPYICSIDGCQASYR
Sbjct: 43  MGSDTQQDVREGKTKDGKSNICPECGAAFKKPAYLKQHMLSHSLERPYICSIDGCQASYR 102

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRH KNFHEDDARPEAKCEKQFVCPE
Sbjct: 103 RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHWKNFHEDDARPEAKCEKQFVCPE 162

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           DGCGKVFRYGSQLQKHEDSH                   EAYCAEPGCMRPFTNKQCLKA
Sbjct: 163 DGCGKVFRYGSQLQKHEDSH-------------------EAYCAEPGCMRPFTNKQCLKA 222

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHM 240
           HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQK IQC HEGCSKVFSTDSNLRQHM
Sbjct: 223 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKIIQCPHEGCSKVFSTDSNLRQHM 282

Query: 241 KVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 300
           KVVHLEQKPF CSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR
Sbjct: 283 KVVHLEQKPFECSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 342

Query: 301 KCPTVEMLIRKRVTPPSELDFMLN 325
           KCPTVEMLIRKRVTPPSELDFMLN
Sbjct: 343 KCPTVEMLIRKRVTPPSELDFMLN 347

[Close]

BLAST of MS004282 vs. NCBI nr
Match: XP_038891321.1 (transcription factor IIIA-like [Benincasa hispida])

HSP 1 Score: 517.7 bits (1332), Expect = 7.3e-143
Identity = 241/320 (75.31%), Postives = 270/320 (84.38%), Query Frame = 0


Query: 6   QEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKDHL 65
           + D G+ KTK+GKSNIC ECGA F+KPAYL+QHM SHSLERPY+CS+DGC+ASYRRKDHL
Sbjct: 5   KHDDGDDKTKNGKSNICQECGAEFRKPAYLKQHMQSHSLERPYVCSVDGCEASYRRKDHL 64

Query: 66  TRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPEDGCGK 125
           TRHLL HQG +FKCPIESC  EF+    + RHLK  HED+A  E +C+KQFVCPEDGCGK
Sbjct: 65  TRHLLHHQGIIFKCPIESCCREFSYISCVNRHLKECHEDEASSE-ECQKQFVCPEDGCGK 124

Query: 126 VFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKAHIQSC 185
           VFRY SQLQKHEDSH             VKLDSIEAYC EPGCM+ FTNKQCL+AH+QSC
Sbjct: 125 VFRYASQLQKHEDSH-------------VKLDSIEAYCTEPGCMKTFTNKQCLRAHMQSC 184

Query: 186 HQYIKCEICGSEKLRKNIKRHLR-KHESEGPQKTIQCSHEGCSKVFSTDSNLRQHMKVVH 245
           HQY+KCEICG +KLRKN+K+HLR KHESEGP + I C+ EGCSKVFST SNL+QHMKVVH
Sbjct: 185 HQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTFEGCSKVFSTASNLQQHMKVVH 244

Query: 246 LEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKRKCPT 305
           L QKPF+C F GCGMRFGY+HVRDNHE+SG HVY NGDFE ADEQFRSKPRGGRKR CPT
Sbjct: 245 LGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTNGDFEEADEQFRSKPRGGRKRICPT 304

Query: 306 VEMLIRKRVTPPSELDFMLN 325
           VEMLIRKRVTPPSELDFM++
Sbjct: 305 VEMLIRKRVTPPSELDFMMD 310

[Close]

BLAST of MS004282 vs. NCBI nr
Match: XP_038905330.1 (transcription factor IIIA-like [Benincasa hispida])

HSP 1 Score: 512.3 bits (1318), Expect = 3.0e-141
Identity = 241/325 (74.15%), Postives = 269/325 (82.77%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           M S   +D  + K K  KSNIC +CG  FKKPAYL+QHM SHS ERPYICS+DGCQASYR
Sbjct: 1   MESGKPKDDADAKAKGRKSNICQDCGVDFKKPAYLKQHMQSHSFERPYICSVDGCQASYR 60

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLLQHQG +F+CPI+SCS EFA   S+ RHLK  HED+A PE +C+KQFVCPE
Sbjct: 61  RKDHLTRHLLQHQGILFECPIDSCSREFAYLSSVNRHLKELHEDNAPPEVECQKQFVCPE 120

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           DGCGKVFRY S+LQKHEDSH             +KLDSIEAYCAEPGCM+ FTNKQCL A
Sbjct: 121 DGCGKVFRYASRLQKHEDSH-------------MKLDSIEAYCAEPGCMKTFTNKQCLAA 180

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLRK-HESEGPQKTIQCSHEGCSKVFSTDSNLRQH 240
           H QSCH+YI CEICG  KLRKNIKRHLR+ HESEGPQKTIQC+HE CSKVFS+ SNLRQH
Sbjct: 181 HRQSCHKYINCEICGKRKLRKNIKRHLRQAHESEGPQKTIQCTHESCSKVFSSISNLRQH 240

Query: 241 MKVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRK 300
           MKV HL+QKPF+C FSGC MRFGY+HVRDNHE+SG+HVY NGDFEVADEQFRSKPRGGRK
Sbjct: 241 MKVKHLDQKPFACGFSGCSMRFGYKHVRDNHEKSGYHVYTNGDFEVADEQFRSKPRGGRK 300

Query: 301 RKCPTVEMLIRKRVTPPSELDFMLN 325
           RKCPT+EMLIRKRVT  +  DFM++
Sbjct: 301 RKCPTIEMLIRKRVTLQA-CDFMMD 311

[Close]

BLAST of MS004282 vs. NCBI nr
Match: XP_022945877.1 (transcription factor IIIA-like [Cucurbita moschata])

HSP 1 Score: 512.3 bits (1318), Expect = 3.0e-141
Identity = 241/325 (74.15%), Postives = 271/325 (83.38%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           M S   +D G+ K KD KSNIC ECGAAFKKPAYL+QHM SHSLERPYIC++DGC ASYR
Sbjct: 1   MESGKYKDDGDDKAKDRKSNICLECGAAFKKPAYLKQHMQSHSLERPYICTVDGCDASYR 60

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLLQHQG +FKCPIE+CS EFA    L RHLK FHE D  PE +C+K+FVCPE
Sbjct: 61  RKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHEGDT-PEVECQKRFVCPE 120

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           D CGK FRY SQLQKHEDSH              KLDS+EA C+E GCM+ FTNKQCLKA
Sbjct: 121 DECGKEFRYASQLQKHEDSH-------------AKLDSVEACCSELGCMKTFTNKQCLKA 180

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLR-KHESEGPQKTIQCSHEGCSKVFSTDSNLRQH 240
           H+QSCHQYI+CEICG +KLRKNIK+HLR KHES+GPQ TI+C+HEGCS VFST SNLRQH
Sbjct: 181 HMQSCHQYIECEICGEKKLRKNIKQHLRQKHESDGPQTTIRCTHEGCSNVFSTSSNLRQH 240

Query: 241 MKVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRK 300
           +KVVHL QKPF+C F GCGMRFGY+HVRDNHE+SG HVY +GDFEVADE+FRSKPRGGRK
Sbjct: 241 VKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRGGRK 300

Query: 301 RKCPTVEMLIRKRVTPPSELDFMLN 325
           R CPTVEMLIRKRVTPP+EL+FM++
Sbjct: 301 RVCPTVEMLIRKRVTPPTELNFMMD 311

[Close]

BLAST of MS004282 vs. ExPASy Swiss-Prot
Match: Q84MZ4 (Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 6.0e-100
Identity = 179/366 (48.91%), Postives = 227/366 (62.02%), Query Frame = 0


Query: 4   DTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKD 63
           +  ++  E   +   ++ C ECGA FKKPA+L+QHM SHSLER + C +D C ASYRRKD
Sbjct: 50  ERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKD 109

Query: 64  HLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPE-------------- 123
           HL RHLL H+G +FKCP E+C +EF+ Q ++ RH+K +H +D R +              
Sbjct: 110 HLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDNTC 169

Query: 124 ------------------------------------AKC---EKQFVCPEDGCGKVFRYG 183
                                               A+C   +KQ VC E GCGK F+Y 
Sbjct: 170 KGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECSTGQKQVVCKEIGCGKAFKYP 229

Query: 184 SQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKAHIQSCHQYIK 243
           SQLQKH+DSH             VKLDS+EA+C+EPGCM+ FTN++CLK+HI+SCHQ+I 
Sbjct: 230 SQLQKHQDSH-------------VKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHIN 289

Query: 244 CEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHMKVVHLEQKPF 303
           CEICGS+ L+KNIKRHLR H+ +     I+C  EGCS  FS  SNL++HMK VH + +PF
Sbjct: 290 CEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPF 349

Query: 304 SCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKRKCPTVEMLIR 317
            C F GCGMRF Y+HVR+ HE SG+HVY  GDF   DE F S+PRGG KRK  T EML+R
Sbjct: 350 VCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRKQVTAEMLVR 402

[Close]

BLAST of MS004282 vs. ExPASy Swiss-Prot
Match: Q92664 (Transcription factor IIIA OS=Homo sapiens OX=9606 GN=GTF3A PE=1 SV=3)

HSP 1 Score: 139.8 bits (351), Expect = 5.4e-32
Identity = 80/263 (30.42%), Postives = 129/263 (49.05%), Query Frame = 0


Query: 23  PECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKDHLTRHLLQHQG-NVFKCPI 82
           P+C A + K   L  H+  H+ ERP++C  +GC  ++ R  HL+RH+L H G   F C  
Sbjct: 45  PDCSANYSKAWKLDAHLCKHTGERPFVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAA 104

Query: 83  ESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQKHEDSHK 142
             C  +F ++ +LK+H +  HE+        +KQ++C  + C K F+   QL+ H+  H 
Sbjct: 105 NGCDQKFNTKSNLKKHFERKHENQ-------QKQYICSFEDCKKTFKKHQQLKIHQCQH- 164

Query: 143 ISMYLF--------KFYLTVVKL----DSIEAYCAEPGCMRPFTNKQCLKAHIQSCH-QY 202
            +  LF        K + +  KL     + E Y  + GC         L  H++  H + 
Sbjct: 165 TNEPLFKCTQEGCGKHFASPSKLKRHAKAHEGYVCQKGCSFVAKTWTELLKHVRETHKEE 224

Query: 203 IKCEICGSEKLRKN-IKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHMKVVHLEQ 262
           I CE+C     RK+ +K+H++ H  E  +   +C  EGC + ++T  NL+ H+   H E 
Sbjct: 225 ILCEVCRKTFKRKDYLKQHMKTHAPE--RDVCRCPREGCGRTYTTVFNLQSHILSFHEES 284

Query: 263 KPFSCSFSGCGMRFGYRHVRDNH 271
           +PF C  +GCG  F  +     H
Sbjct: 285 RPFVCEHAGCGKTFAMKQSLTRH 297

[Close]

BLAST of MS004282 vs. ExPASy Swiss-Prot
Match: Q8VHT8 (Transcription factor IIIA OS=Rattus norvegicus OX=10116 GN=Gtf3a PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 79/263 (30.04%), Postives = 133/263 (50.57%), Query Frame = 0


Query: 23  PECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKDHLTRHLLQHQG-NVFKCPI 82
           P+C A++ K   L  H+  H+ ERP++C  +GC  ++ R  HL+RH+L H G   F C  
Sbjct: 43  PDCSASYNKAWKLDAHLCKHTGERPFVCDYEGCGKAFIRDYHLSRHILIHTGEKPFVCAD 102

Query: 83  ESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQKHEDSHK 142
             C+ +F+++ +LK+H++  HE+        +KQ+VC  +GC K F+   QL+ H+  H 
Sbjct: 103 NGCNQKFSTKSNLKKHIERKHENP-------QKQYVCNFEGCKKAFKKHQQLRTHQCQH- 162

Query: 143 ISMYLF--------KFYLTVVKLDS----IEAYCAEPGCMRPFTNKQCLKAHIQSCH-QY 202
            +  LF        K + +  +L       E Y  + GC         L  H +  H + 
Sbjct: 163 TNEPLFRCTHEGCGKHFASPSRLKRHGKVHEGYLCQKGCSFVGKTWTELLKHTREAHKEE 222

Query: 203 IKCEICGSEKLRK-NIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHMKVVHLEQ 262
           + C +C     RK ++K+H++ H  E  +   +C  EGC++ ++T  NL+ H+   H E+
Sbjct: 223 VTCTVCQKMFKRKDHLKQHMKTHAPE--RDVYRCPREGCARTYTTVFNLQSHILSFHEEK 282

Query: 263 KPFSCSFSGCGMRFGYRHVRDNH 271
           +PF C  +GCG  F  +     H
Sbjct: 283 RPFVCEHAGCGKTFAMKQSLMRH 295

[Close]

BLAST of MS004282 vs. ExPASy Swiss-Prot
Match: Q8VHT7 (Transcription factor IIIA OS=Mus musculus OX=10090 GN=Gtf3a PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 7.8e-31
Identity = 79/263 (30.04%), Postives = 131/263 (49.81%), Query Frame = 0


Query: 23  PECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKDHLTRHLLQHQG-NVFKCPI 82
           P+C A++ K   L  H+  H+ ERP++C  +GC  ++ R  HL+RH+L H G   F C  
Sbjct: 43  PDCSASYNKAWKLDAHLCKHTGERPFVCDYEGCGKAFIRDYHLSRHVLIHTGEKPFVCAD 102

Query: 83  ESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQKHEDSHK 142
           + C+ +F ++ +LK+H++  H +        +KQ+VC  +GC K F+   QL+ H+  H 
Sbjct: 103 DGCNQKFNTKSNLKKHIERKHGNP-------QKQYVCSYEGCKKAFKKHQQLRTHQCQH- 162

Query: 143 ISMYLF--------KFYLTVVKLDS----IEAYCAEPGCMRPFTNKQCLKAHIQSCH-QY 202
            S  LF        K + +  +L       E Y  + GC         L  H++  H + 
Sbjct: 163 TSEPLFRCTHEGCGKHFASPSRLKRHGKVHEGYLCQKGCSFMGKTWTELLKHMREAHKED 222

Query: 203 IKCEICGSE-KLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHMKVVHLEQ 262
           I C +C    K R  +K+H++ H  E  +   +C  +GC + ++T  NL+ H+   H E+
Sbjct: 223 ITCNVCQRMFKRRDYLKQHMKTHAPE--RDVYRCPRQGCGRTYTTVFNLQSHILSFHEEK 282

Query: 263 KPFSCSFSGCGMRFGYRHVRDNH 271
           +PF C  +GCG  F  +     H
Sbjct: 283 RPFVCEHAGCGKTFAMKQSLMRH 295

[Close]

BLAST of MS004282 vs. ExPASy Swiss-Prot
Match: P17842 (Transcription factor IIIA OS=Xenopus borealis OX=8354 GN=gtf3a PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 78/286 (27.27%), Postives = 127/286 (44.41%), Query Frame = 0


Query: 18  KSNIC--PECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKDHLTRHLLQHQGN 77
           K  IC   +CGA++ K   LR H+  H+ E+P+ C  +GC   +    HLTRH + H G 
Sbjct: 11  KRYICSFADCGASYNKNWKLRAHLCKHTGEKPFPCKEEGCDKGFTSLHHLTRHSITHTGE 70

Query: 78  V-FKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQ 137
             FKC  + C   F ++ ++K+H   FH         C   +VC  +GC K F+  +QL+
Sbjct: 71  KNFKCDSDKCDLTFTTKANMKKHFNRFHNLQL-----C--VYVCHFEGCDKAFKKHNQLK 130

Query: 138 KHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLK--------------- 197
            H+ +H                  +   C   GC + F+   CLK               
Sbjct: 131 VHQFTH---------------TQQLPYKCPHEGCDKSFSVPSCLKRHEKVHAGYPCKKDD 190

Query: 198 -------------AHIQSCHQY-IKCEIC-GSEKLRKNIKRHLRKHESEGPQKTIQCSHE 257
                         H++ CHQ  + C+ C  + K +  ++ H + H+ E  +    C  +
Sbjct: 191 SCLFVGKTWTLYLKHVKECHQEPVMCDECKRTFKHKDYLRNHKKTHKKE--RTVYCCPRD 250

Query: 258 GCSKVFSTDSNLRQHMKVVHLEQKPFSCSFSGCGMRFGYRHVRDNH 271
           GC + ++T+ NL+ HM+  H EQ+PF+C  + CG  F  +   + H
Sbjct: 251 GCERSYTTEFNLQSHMQSFHEEQRPFACEHAECGKSFAMKKSLERH 272

[Close]

BLAST of MS004282 vs. ExPASy TrEMBL
Match: A0A6J1CF84 (transcription factor IIIA isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010203 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.5e-181
Identity = 304/324 (93.83%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           MGSDTQ+DV EGKTKDGKSNICPECGAAFKKPAYL+QHMLSHSLERPYICSIDGCQASYR
Sbjct: 43  MGSDTQQDVREGKTKDGKSNICPECGAAFKKPAYLKQHMLSHSLERPYICSIDGCQASYR 102

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRH KNFHEDDARPEAKCEKQFVCPE
Sbjct: 103 RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHWKNFHEDDARPEAKCEKQFVCPE 162

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           DGCGKVFRYGSQLQKHEDSH             VKLDSIEAYCAEPGCMRPFTNKQCLKA
Sbjct: 163 DGCGKVFRYGSQLQKHEDSH-------------VKLDSIEAYCAEPGCMRPFTNKQCLKA 222

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHM 240
           HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQK IQC HEGCSKVFSTDSNLRQHM
Sbjct: 223 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKIIQCPHEGCSKVFSTDSNLRQHM 282

Query: 241 KVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 300
           KVVHLEQKPF CSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR
Sbjct: 283 KVVHLEQKPFECSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 342

Query: 301 KCPTVEMLIRKRVTPPSELDFMLN 325
           KCPTVEMLIRKRVTPPSELDFMLN
Sbjct: 343 KCPTVEMLIRKRVTPPSELDFMLN 353

[Close]

BLAST of MS004282 vs. ExPASy TrEMBL
Match: A0A6J1CCD6 (transcription factor IIIA isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010203 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.2e-177
Identity = 298/324 (91.98%), Postives = 300/324 (92.59%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           MGSDTQ+DV EGKTKDGKSNICPECGAAFKKPAYL+QHMLSHSLERPYICSIDGCQASYR
Sbjct: 43  MGSDTQQDVREGKTKDGKSNICPECGAAFKKPAYLKQHMLSHSLERPYICSIDGCQASYR 102

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRH KNFHEDDARPEAKCEKQFVCPE
Sbjct: 103 RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHWKNFHEDDARPEAKCEKQFVCPE 162

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           DGCGKVFRYGSQLQKHEDSH                   EAYCAEPGCMRPFTNKQCLKA
Sbjct: 163 DGCGKVFRYGSQLQKHEDSH-------------------EAYCAEPGCMRPFTNKQCLKA 222

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHM 240
           HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQK IQC HEGCSKVFSTDSNLRQHM
Sbjct: 223 HIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKIIQCPHEGCSKVFSTDSNLRQHM 282

Query: 241 KVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 300
           KVVHLEQKPF CSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR
Sbjct: 283 KVVHLEQKPFECSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKR 342

Query: 301 KCPTVEMLIRKRVTPPSELDFMLN 325
           KCPTVEMLIRKRVTPPSELDFMLN
Sbjct: 343 KCPTVEMLIRKRVTPPSELDFMLN 347

[Close]

BLAST of MS004282 vs. ExPASy TrEMBL
Match: A0A6J1G248 (transcription factor IIIA-like OS=Cucurbita moschata OX=3662 GN=LOC111449986 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.5e-141
Identity = 241/325 (74.15%), Postives = 271/325 (83.38%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           M S   +D G+ K KD KSNIC ECGAAFKKPAYL+QHM SHSLERPYIC++DGC ASYR
Sbjct: 1   MESGKYKDDGDDKAKDRKSNICLECGAAFKKPAYLKQHMQSHSLERPYICTVDGCDASYR 60

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLLQHQG +FKCPIE+CS EFA    L RHLK FHE D  PE +C+K+FVCPE
Sbjct: 61  RKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHEGDT-PEVECQKRFVCPE 120

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           D CGK FRY SQLQKHEDSH              KLDS+EA C+E GCM+ FTNKQCLKA
Sbjct: 121 DECGKEFRYASQLQKHEDSH-------------AKLDSVEACCSELGCMKTFTNKQCLKA 180

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLR-KHESEGPQKTIQCSHEGCSKVFSTDSNLRQH 240
           H+QSCHQYI+CEICG +KLRKNIK+HLR KHES+GPQ TI+C+HEGCS VFST SNLRQH
Sbjct: 181 HMQSCHQYIECEICGEKKLRKNIKQHLRQKHESDGPQTTIRCTHEGCSNVFSTSSNLRQH 240

Query: 241 MKVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRK 300
           +KVVHL QKPF+C F GCGMRFGY+HVRDNHE+SG HVY +GDFEVADE+FRSKPRGGRK
Sbjct: 241 VKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRGGRK 300

Query: 301 RKCPTVEMLIRKRVTPPSELDFMLN 325
           R CPTVEMLIRKRVTPP+EL+FM++
Sbjct: 301 RVCPTVEMLIRKRVTPPTELNFMMD 311

[Close]

BLAST of MS004282 vs. ExPASy TrEMBL
Match: A0A5A7SY16 (Transcription factor IIIA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007900 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.4e-139
Identity = 237/324 (73.15%), Postives = 266/324 (82.10%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           M  D   D G+ KTK GK NIC +CGAAF+KPAYL+QHM SHSLER Y+CSIDGC ASYR
Sbjct: 95  MEIDKHNDEGDDKTKYGKLNICQQCGAAFRKPAYLKQHMQSHSLERSYVCSIDGCNASYR 154

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLL HQG +FKCPIESC  EFA    + RHLK  HE +A PE +C+KQFVCPE
Sbjct: 155 RKDHLTRHLLHHQGTMFKCPIESCCREFAYLSCVTRHLKECHEGEAPPE-ECQKQFVCPE 214

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           DGCGKVFRY S+LQKHE SH             VKLDSIEA C EPGC++ FTNKQCL+A
Sbjct: 215 DGCGKVFRYASRLQKHEGSH-------------VKLDSIEACCTEPGCLKTFTNKQCLRA 274

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLR-KHESEGPQKTIQCSHEGCSKVFSTDSNLRQH 240
           H+Q+CHQY+KCEICG +KLRKN+K+HLR KHESEGP + I C++EGCSKVFST SNL+QH
Sbjct: 275 HMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQH 334

Query: 241 MKVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRK 300
            KVVHL QKPF+C F GCGMRFGY+HVRDNHE+SGHHVY NGDFE ADEQFRSKPRGGRK
Sbjct: 335 TKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRK 394

Query: 301 RKCPTVEMLIRKRVTPPSELDFML 324
           R CPTVEMLIRKRVTPPS+LDFM+
Sbjct: 395 RICPTVEMLIRKRVTPPSDLDFMM 404

[Close]

BLAST of MS004282 vs. ExPASy TrEMBL
Match: A0A1S3BH74 (transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.4e-139
Identity = 237/324 (73.15%), Postives = 266/324 (82.10%), Query Frame = 0


Query: 1   MGSDTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYR 60
           M  D   D G+ KTK GK NIC +CGAAF+KPAYL+QHM SHSLER Y+CSIDGC ASYR
Sbjct: 1   MEIDKHNDEGDDKTKYGKLNICQQCGAAFRKPAYLKQHMQSHSLERSYVCSIDGCNASYR 60

Query: 61  RKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPE 120
           RKDHLTRHLL HQG +FKCPIESC  EFA    + RHLK  HE +A PE +C+KQFVCPE
Sbjct: 61  RKDHLTRHLLHHQGTMFKCPIESCCREFAYLSCVTRHLKECHEGEAPPE-ECQKQFVCPE 120

Query: 121 DGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKA 180
           DGCGKVFRY S+LQKHE SH             VKLDSIEA C EPGC++ FTNKQCL+A
Sbjct: 121 DGCGKVFRYASRLQKHEGSH-------------VKLDSIEACCTEPGCLKTFTNKQCLRA 180

Query: 181 HIQSCHQYIKCEICGSEKLRKNIKRHLR-KHESEGPQKTIQCSHEGCSKVFSTDSNLRQH 240
           H+Q+CHQY+KCEICG +KLRKN+K+HLR KHESEGP + I C++EGCSKVFST SNL+QH
Sbjct: 181 HMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQH 240

Query: 241 MKVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRK 300
            KVVHL QKPF+C F GCGMRFGY+HVRDNHE+SGHHVY NGDFE ADEQFRSKPRGGRK
Sbjct: 241 TKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRK 300

Query: 301 RKCPTVEMLIRKRVTPPSELDFML 324
           R CPTVEMLIRKRVTPPS+LDFM+
Sbjct: 301 RICPTVEMLIRKRVTPPSDLDFMM 310

[Close]

BLAST of MS004282 vs. TAIR 10
Match: AT1G72050.2 (transcription factor IIIA )

HSP 1 Score: 365.5 bits (937), Expect = 4.3e-101
Identity = 179/366 (48.91%), Postives = 227/366 (62.02%), Query Frame = 0


Query: 4   DTQEDVGEGKTKDGKSNICPECGAAFKKPAYLRQHMLSHSLERPYICSIDGCQASYRRKD 63
           +  ++  E   +   ++ C ECGA FKKPA+L+QHM SHSLER + C +D C ASYRRKD
Sbjct: 50  ERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKD 109

Query: 64  HLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDARPE-------------- 123
           HL RHLL H+G +FKCP E+C +EF+ Q ++ RH+K +H +D R +              
Sbjct: 110 HLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDNTC 169

Query: 124 ------------------------------------AKC---EKQFVCPEDGCGKVFRYG 183
                                               A+C   +KQ VC E GCGK F+Y 
Sbjct: 170 KGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECSTGQKQVVCKEIGCGKAFKYP 229

Query: 184 SQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRPFTNKQCLKAHIQSCHQYIK 243
           SQLQKH+DSH             VKLDS+EA+C+EPGCM+ FTN++CLK+HI+SCHQ+I 
Sbjct: 230 SQLQKHQDSH-------------VKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHIN 289

Query: 244 CEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFSTDSNLRQHMKVVHLEQKPF 303
           CEICGS+ L+KNIKRHLR H+ +     I+C  EGCS  FS  SNL++HMK VH + +PF
Sbjct: 290 CEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPF 349

Query: 304 SCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFRSKPRGGRKRKCPTVEMLIR 317
            C F GCGMRF Y+HVR+ HE SG+HVY  GDF   DE F S+PRGG KRK  T EML+R
Sbjct: 350 VCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRKQVTAEMLVR 402

[Close]

BLAST of MS004282 vs. TAIR 10
Match: AT1G72050.1 (transcription factor IIIA )

HSP 1 Score: 325.1 bits (832), Expect = 6.4e-89
Identity = 160/325 (49.23%), Postives = 200/325 (61.54%), Query Frame = 0


Query: 45  ERPYICSIDGCQASYRRKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHED 104
           ER + C +D C ASYRRKDHL RHLL H+G +FKCP E+C +EF+ Q ++ RH+K +H +
Sbjct: 3   ERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSN 62

Query: 105 DARPE--------------------------------------------------AKC-- 164
           D R +                                                  A+C  
Sbjct: 63  DNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECST 122

Query: 165 -EKQFVCPEDGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPGCMRP 224
            +KQ VC E GCGK F+Y SQLQKH+DSH             VKLDS+EA+C+EPGCM+ 
Sbjct: 123 GQKQVVCKEIGCGKAFKYPSQLQKHQDSH-------------VKLDSVEAFCSEPGCMKY 182

Query: 225 FTNKQCLKAHIQSCHQYIKCEICGSEKLRKNIKRHLRKHESEGPQKTIQCSHEGCSKVFS 284
           FTN++CLK+HI+SCHQ+I CEICGS+ L+KNIKRHLR H+ +     I+C  EGCS  FS
Sbjct: 183 FTNEECLKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFS 242

Query: 285 TDSNLRQHMKVVHLEQKPFSCSFSGCGMRFGYRHVRDNHERSGHHVYINGDFEVADEQFR 317
             SNL++HMK VH + +PF C F GCGMRF Y+HVR+ HE SG+HVY  GDF   DE F 
Sbjct: 243 KASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFT 302

[Close]

BLAST of MS004282 vs. TAIR 10
Match: AT4G06634.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 69.3 bits (168), Expect = 6.4e-12
Identity = 50/203 (24.63%), Postives = 82/203 (40.39%), Query Frame = 0


Query: 48  YICSIDGCQASYRRKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDAR 107
           ++CS DGC  ++     L +H   H    + C  E C  +F     LKRH    H     
Sbjct: 79  FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYL-IHTG--- 138

Query: 108 PEAKCEKQFVCPEDGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPG 167
                E+ ++C  +GCGK F     L+ H  +H    Y                 C   G
Sbjct: 139 -----ERNYICTYEGCGKAFSLDFNLRSHMKTHSQENY---------------HICPYSG 198

Query: 168 CMRPFTNKQCLKAHIQSCHQYIKCEICGSEKLRKNIKRHLRKHESE----GP--QKTIQC 227
           C++ + ++  LK H+ + H+  K     + K     ++ LR  ++     GP   +   C
Sbjct: 199 CVKRYAHEYKLKNHVAAYHE--KNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYAC 255

Query: 228 SHEGCSKVFSTDSNLRQHMKVVH 245
            +EGC K +  +  L+ H+K  H
Sbjct: 259 PYEGCEKAYIHEYKLKLHLKREH 255

[Close]

BLAST of MS004282 vs. TAIR 10
Match: AT4G06634.2 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 69.3 bits (168), Expect = 6.4e-12
Identity = 50/203 (24.63%), Postives = 82/203 (40.39%), Query Frame = 0


Query: 48  YICSIDGCQASYRRKDHLTRHLLQHQGNVFKCPIESCSNEFASQDSLKRHLKNFHEDDAR 107
           ++CS DGC  ++     L +H   H    + C  E C  +F     LKRH    H     
Sbjct: 41  FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYL-IHTG--- 100

Query: 108 PEAKCEKQFVCPEDGCGKVFRYGSQLQKHEDSHKISMYLFKFYLTVVKLDSIEAYCAEPG 167
                E+ ++C  +GCGK F     L+ H  +H    Y                 C   G
Sbjct: 101 -----ERNYICTYEGCGKAFSLDFNLRSHMKTHSQENY---------------HICPYSG 160

Query: 168 CMRPFTNKQCLKAHIQSCHQYIKCEICGSEKLRKNIKRHLRKHESE----GP--QKTIQC 227
           C++ + ++  LK H+ + H+  K     + K     ++ LR  ++     GP   +   C
Sbjct: 161 CVKRYAHEYKLKNHVAAYHE--KNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYAC 217

Query: 228 SHEGCSKVFSTDSNLRQHMKVVH 245
            +EGC K +  +  L+ H+K  H
Sbjct: 221 PYEGCEKAYIHEYKLKLHLKREH 217

[Close]

BLAST of MS004282 vs. TAIR 10
Match: AT4G06634.3 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-09
Identity = 44/168 (26.19%), Postives = 70/168 (41.67%), Query Frame = 0


Query: 25  CGAAFKKPAYLRQHMLSHSLERPYICSIDGC----QASYRRKDHLTRHLLQH-QGNVFKC 84
           CG  F   + L++H L H+ ER YIC+ +GC      ++    +L  H+  H Q N   C
Sbjct: 104 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKLWMQAFSLDFNLRSHMKTHSQENYHIC 163

Query: 85  PIESCSNEFASQDSLKRHLKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQKHEDS 144
           P   C   +A +  LK H+  +HE                ++G G+  +Y    +K    
Sbjct: 164 PYSGCVKRYAHEYKLKNHVAAYHE----------------KNGGGETPKYTPPAEK---- 223

Query: 145 HKISMYLFKFYLTVVKLDSIEAY-CAEPGCMRPFTNKQCLKAHIQSCH 187
               +   K   TV    S   Y C   GC + + ++  LK H++  H
Sbjct: 224 ---VLRTVKTPATVCGPSSDRPYACPYEGCEKAYIHEYKLKLHLKREH 248

The following BLAST results are available for this feature:

BLAST of MS004282 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139243.1	5.1e-181	93.83	transcription factor IIIA isoform X1 [Momordica charantia]	[more]
XP_022139244.1	4.5e-177	91.98	transcription factor IIIA isoform X2 [Momordica charantia]	[more]
XP_038891321.1	7.3e-143	75.31	transcription factor IIIA-like [Benincasa hispida]	[more]
XP_038905330.1	3.0e-141	74.15	transcription factor IIIA-like [Benincasa hispida]	[more]
XP_022945877.1	3.0e-141	74.15	transcription factor IIIA-like [Cucurbita moschata]	[more]

BLAST of MS004282 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MZ4	6.0e-100	48.91	Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1	[more]
Q92664	5.4e-32	30.42	Transcription factor IIIA OS=Homo sapiens OX=9606 GN=GTF3A PE=1 SV=3	[more]
Q8VHT8	1.2e-31	30.04	Transcription factor IIIA OS=Rattus norvegicus OX=10116 GN=Gtf3a PE=2 SV=2	[more]
Q8VHT7	7.8e-31	30.04	Transcription factor IIIA OS=Mus musculus OX=10090 GN=Gtf3a PE=2 SV=2	[more]
P17842	1.1e-29	27.27	Transcription factor IIIA OS=Xenopus borealis OX=8354 GN=gtf3a PE=2 SV=1	[more]

BLAST of MS004282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CF84	2.5e-181	93.83	transcription factor IIIA isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1CCD6	2.2e-177	91.98	transcription factor IIIA isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1G248	1.5e-141	74.15	transcription factor IIIA-like OS=Cucurbita moschata OX=3662 GN=LOC111449986 PE=...	[more]
A0A5A7SY16	1.4e-139	73.15	Transcription factor IIIA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BH74	1.4e-139	73.15	transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1	[more]

BLAST of MS004282 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72050.2	4.3e-101	48.91	transcription factor IIIA	[more]
AT1G72050.1	6.4e-89	49.23	transcription factor IIIA	[more]
AT4G06634.1	6.4e-12	24.63	zinc finger (C2H2 type) family protein	[more]
AT4G06634.2	6.4e-12	24.63	zinc finger (C2H2 type) family protein	[more]
AT4G06634.3	5.0e-09	26.19	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 250..275 e-value: 2.3 score: 17.2 coord: 48..72 e-value: 0.0012 score: 28.1 coord: 116..140 e-value: 0.0012 score: 28.1 coord: 77..102 e-value: 0.0048 score: 26.1 coord: 189..210 e-value: 10.0 score: 13.1 coord: 161..186 e-value: 6.9 score: 14.7 coord: 20..42 e-value: 0.01 score: 25.0 coord: 219..244 e-value: 1.6E-4 score: 31.0
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 220..244 e-value: 2.2E-4 score: 21.5 coord: 22..42 e-value: 4.7E-4 score: 20.5 coord: 48..72 e-value: 0.0049 score: 17.3 coord: 116..140 e-value: 0.0013 score: 19.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 50..72
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 79..102
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 22..42
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 221..244
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 163..186
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 118..140
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 20..47 score: 12.715416
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 219..249 score: 13.338909
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 48..77 score: 9.286205
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 77..107 score: 10.782589
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 116..140 score: 10.678673
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 109..188 e-value: 2.4E-7 score: 32.6
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 49..74 e-value: 3.3E-9 score: 38.4
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 18..48 e-value: 5.2E-8 score: 34.4
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 214..295 e-value: 1.2E-10 score: 43.4
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 75..108 e-value: 8.0E-6 score: 27.4
None	No IPR available	PANTHER	PTHR46179	ZINC FINGER PROTEIN	coord: 6..320
None	No IPR available	PANTHER	PTHR46179:SF13	ZINC FINGER PROTEIN 423 HOMOLOG	coord: 6..320
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 113..140
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 20..72
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 201..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004282.1	MS004282.1	mRNA