MS004251 (gene) Bitter gourd (TR) v1

Overview


Name	MS004251
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Yae1_N domain-containing protein
Location	scaffold92: 1185178 .. 1187195 (+)
RNA-Seq Expression	MS004251
Synteny	MS004251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTACTGTCTGGTTTTAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTTGGAGGAAATATCTGATTTGGACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGGTAACAGCCTTATGTTGACTATTTTATTTTATCTTTTTCTTTAATAATTGATTTCATATATGTAGGATTGAAATGGTTTTCGTGCTCCTTTTACCCTTTAACAACATTTAGATTGGATACCGTGATGGTTTAATCGCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGGTAATGAGAGAATGAATTCCCTAACCATTTTACGAATGCATTAATACATATATTTCTCTTTCAAAGTCTGTGTCGGCAAGAATTTCCTTACAAAAAGAACTCTTGGTTCTTGGAATTTAACAGTTATACTATAATGTTCTTATGCTCTAAAAAATTTAGTCCCGACAACACAATGGTGTGACATTCTGAATTGTTAAGAGAAAGCTGGTCAGGTGTAGCGTGCAAAGAGGTCTAGGATAGTATTTTTAAGACCACATGCTGTCTCTCTCTTCTTGCGCATCTTGCAAAGGTCTCTGGACACGACTGAAATCAGCCTCATAGGTTGTGCAATTGTGTCGAGTTGAGAAGCTACATTGCCTTCTTCATCTCTTTCTTAATTCTCTCTCCCTCCCTCTCTCTCTCTTTTAATAAGAAATAAAACTATGTTCAGAAGAAAAAACCAACTACAAAACAACCTAGAACCGGGGTGGCCCAAAGAACTGCAAAAGAAGAGCCTTCCTATCACTATTAATCATTAGAAGACTATAGTTAGTTTGAACAATACCAAGAGAGGACGAATACTGCACACTATTACAAAAAGAATCAAAAGAAGATATTTTAACTTCCAAAGATGCCGTGGAAGACCCTTAGCCACAGCTCCACAGGACCTTAGACTTGCTCTTAAATCACCAACTCTGCTTCCATAAATCAATCATCTACTCGTCTAGGGCAACATAAAGAAAAACCAAGCTCTTTCAAAATAAAAGACCATCCCCTGGAGGCCAAATGGCAATGAAGGAAAAGGTAGTCCAAAGATTCACCGTCCTTGAGGCATAGACAGTAAACTGTAGGGGATAAGCCCAATTCGGGAATTTTCTTGCAGCATCTCTCGAGTATTTATAGGCTTTCTATAGGCTAAAGACCACTGAAACATGTTTAACATTTTTTGGAATTCTTAAGTTTGAACCCAAACAAGCTCCACGGAAACATCTTGATTCTCTCTTTTCAGCTTTCCAGTCTAAGCCCACATGGATCTCTTCAGTGAGGATAGATATGTTGCACTGAAATTATACAATATAACTAGAAGTTGAAGCATAATTTAGGTGCGATTTCAAATGCGAATACTAAATAAAATAGTTTGTTAAAGCCCGGAGAAATAAATTTGCACATCACCCCATTGGCCATTCGTCTATTGTTAAAGCCTGGAGGATAGATATGGGGTTTCCTCTACCCAGCCCTTAGGTTGTTCCTTTTGTCTTTCTTTTGGAATATACAAGTTTCTTATCTAAAAAAAAAAACGTCTATTGTTCTTGTTACTGCGTTGTACTTAATATTTTTGTTTTCTTCTTCTGTAGTGTGCTTGCTTGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAATGAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTCTTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGACATGACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATGATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCACTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAG

mRNA sequence

ATGACTTACTGTCTGGTTTTAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTTGGAGGAAATATCTGATTTGGACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGATTGGATACCGTGATGGTTTAATCGCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTTGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAATGAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTCTTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGACATGACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATGATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCACTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAG

Coding sequence (CDS)

ATGACTTACTGTCTGGTTTTAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTTGGAGGAAATATCTGATTTGGACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGATTGGATACCGTGATGGTTTAATCGCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTTGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAATGAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTCTTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGACATGACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATGATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCACTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAG

Protein sequence

MTYCLVLGSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

Homology

[Close]

BLAST of MS004251 vs. NCBI nr
Match: XP_022138890.1 (uncharacterized protein LOC111009960 [Momordica charantia])

HSP 1 Score: 371.3 bits (952), Expect = 5.0e-99
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLI+GKEAAAQEGF
Sbjct: 36  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGF 95

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNS+STADA
Sbjct: 96  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSISTADA 155

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLFNDEILAQD TEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL
Sbjct: 156 LRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 215

Query: 188 HEDQ 192
           HEDQ
Sbjct: 216 HEDQ 219

[Close]

BLAST of MS004251 vs. NCBI nr
Match: XP_023514291.1 (uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023514300.1 uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.8 bits (787), Expect = 6.7e-80
Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 36  GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 95

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EEN SKFQSLYE  NSLSTADA
Sbjct: 96  NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 155

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+++I+AQ   EECVDA+T+S+TI LLKQN D+ RLGKFYGELQALLP SPAL +HL
Sbjct: 156 LRLFHNDIMAQHTKEECVDANTSSQTIDLLKQNSDNSRLGKFYGELQALLPTSPALNLHL 215

Query: 188 HEDQ 192
           HE+Q
Sbjct: 216 HEEQ 219

[Close]

BLAST of MS004251 vs. NCBI nr
Match: XP_023514282.1 (uncharacterized protein LOC111778596 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.8 bits (787), Expect = 6.7e-80
Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 43  GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 102

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EEN SKFQSLYE  NSLSTADA
Sbjct: 103 NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 162

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+++I+AQ   EECVDA+T+S+TI LLKQN D+ RLGKFYGELQALLP SPAL +HL
Sbjct: 163 LRLFHNDIMAQHTKEECVDANTSSQTIDLLKQNSDNSRLGKFYGELQALLPTSPALNLHL 222

Query: 188 HEDQ 192
           HE+Q
Sbjct: 223 HEEQ 226

[Close]

BLAST of MS004251 vs. NCBI nr
Match: KAG6601147.1 (Crossover junction endonuclease MUS81, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.4 bits (786), Expect = 8.8e-80
Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 513 GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 572

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EEN SKFQSLYE  NSLSTADA
Sbjct: 573 NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 632

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+D+I+AQ   EECVDA+T+S+TI LLKQN D+ RLG+FYGELQALLP SPAL +HL
Sbjct: 633 LRLFHDDIMAQCTKEECVDANTSSQTIDLLKQNSDNSRLGQFYGELQALLPTSPALNLHL 692

Query: 188 HEDQ 192
           HE+Q
Sbjct: 693 HEEQ 696

[Close]

BLAST of MS004251 vs. NCBI nr
Match: KAG7031946.1 (hypothetical protein SDJN02_05988 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.4 bits (786), Expect = 8.8e-80
Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 36  GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 95

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EEN SKFQSLYE  NSLSTADA
Sbjct: 96  NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 155

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+D+I+AQ   EECVDA+T+S+TI LLKQN D+ RLG+FYGELQALLP SPAL +HL
Sbjct: 156 LRLFHDDIMAQCTKEECVDANTSSQTIDLLKQNSDNSRLGQFYGELQALLPTSPALNLHL 215

Query: 188 HEDQ 192
           HE+Q
Sbjct: 216 HEEQ 219

[Close]

BLAST of MS004251 vs. ExPASy Swiss-Prot
Match: Q9NRH1 (Protein YAE1 homolog OS=Homo sapiens OX=9606 GN=YAE1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05
Identity = 29/78 (37.18%), Postives = 37/78 (47.44%), Query Frame = 0


Query: 14 LCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQ 73
          L Q  G      DE  +E     REWQ    +    GYRDG+ AGK    Q+GFN G+K+
Sbjct: 9  LIQGPGDKGDVFDEEADESLLAQREWQSNMQRRVKEGYRDGIDAGKAVTLQQGFNQGYKK 68

Query: 74 SVFIGYKLGLVRGVSSVL 92
             +    G +RG  S L
Sbjct: 69 GAEVILNYGRLRGTLSAL 86

[Close]

BLAST of MS004251 vs. ExPASy TrEMBL
Match: A0A6J1CAS2 (uncharacterized protein LOC111009960 OS=Momordica charantia OX=3673 GN=LOC111009960 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLI+GKEAAAQEGF
Sbjct: 36  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGF 95

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNS+STADA
Sbjct: 96  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSISTADA 155

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLFNDEILAQD TEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL
Sbjct: 156 LRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 215

Query: 188 HEDQ 192
           HEDQ
Sbjct: 216 HEDQ 219

[Close]

BLAST of MS004251 vs. ExPASy TrEMBL
Match: A0A6J1H273 (uncharacterized protein LOC111458903 OS=Cucurbita moschata OX=3662 GN=LOC111458903 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.8e-79
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDE LEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 36  GSAVNDSCEDDGSLWGGSDECLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 95

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE  SKFQSLYE  NSLSTADA
Sbjct: 96  NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEEYRSKFQSLYESVNSLSTADA 155

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+D+I+AQ   EECVDA+T+S+TI LLKQN D GRLG+FYGELQALLPKSPAL +HL
Sbjct: 156 LRLFHDDIMAQHTKEECVDANTSSQTIDLLKQNSDYGRLGQFYGELQALLPKSPALNLHL 215

Query: 188 HEDQ 192
           HE+Q
Sbjct: 216 HEEQ 219

[Close]

BLAST of MS004251 vs. ExPASy TrEMBL
Match: A0A6J1JRH1 (uncharacterized protein LOC111487537 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 151/184 (82.07%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 36  GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 95

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EEN SKFQSLYE  NSLSTADA
Sbjct: 96  NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 155

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+D+I+AQ   EE VDA+T+S+TI LLKQN D  RLG+FYGELQALLP SPAL +HL
Sbjct: 156 LRLFHDDIMAQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHL 215

Query: 188 HEDQ 192
           HE+Q
Sbjct: 216 HEEQ 219

[Close]

BLAST of MS004251 vs. ExPASy TrEMBL
Match: A0A6J1JR95 (uncharacterized protein LOC111487537 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 151/184 (82.07%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 43  GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 102

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EEN SKFQSLYE  NSLSTADA
Sbjct: 103 NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 162

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+D+I+AQ   EE VDA+T+S+TI LLKQN D  RLG+FYGELQALLP SPAL +HL
Sbjct: 163 LRLFHDDIMAQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHL 222

Query: 188 HEDQ 192
           HE+Q
Sbjct: 223 HEEQ 226

[Close]

BLAST of MS004251 vs. ExPASy TrEMBL
Match: A0A6J1JSZ3 (uncharacterized protein LOC111487537 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 151/184 (82.07%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 8   GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGF 67
           GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGF
Sbjct: 52  GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 111

Query: 68  NVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADA 127
           NVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EEN SKFQSLYE  NSLSTADA
Sbjct: 112 NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 171

Query: 128 LRLFNDEILAQDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHL 187
           LRLF+D+I+AQ   EE VDA+T+S+TI LLKQN D  RLG+FYGELQALLP SPAL +HL
Sbjct: 172 LRLFHDDIMAQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHL 231

Query: 188 HEDQ 192
           HE+Q
Sbjct: 232 HEEQ 235

[Close]

BLAST of MS004251 vs. TAIR 10
Match: AT1G34570.1 (Essential protein Yae1, N-terminal )

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 70/169 (41.42%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 18  DGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFI 77
           D   +G SDE   E   LD E ++R  +FH+ GYRDG++ GKEA AQEG+N G+K+SV  
Sbjct: 36  DDPFYGSSDEDYSEARVLDNENEQRRVKFHSAGYRDGIVVGKEAIAQEGYNFGYKESVLA 95

Query: 78  GYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILA 137
           GYK G+VRGVSS LA LP + +EKL+  +E   KFQ L+   ++LST  A++ F + +  
Sbjct: 96  GYKFGIVRGVSSALAFLPVEFREKLIDEQETREKFQKLHSSVHALSTEVAMKQFYETLTT 155

Query: 138 QDMTEECVDADTNSRTI-GLLKQNPDDGRLGKFYGELQALLPKSPALKV 186
           +   E+  +   +S ++ G          LG +  EL +LL KSP ++V
Sbjct: 156 KQGEEKSGEEGPDSCSVSGSCSGVNVTADLGSYVTELSSLLDKSPTIEV 204

[Close]

BLAST of MS004251 vs. TAIR 10
Match: AT3G15750.1 (Essential protein Yae1, N-terminal )

HSP 1 Score: 128.3 bits (321), Expect = 6.8e-30
Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 0


Query: 14  LCQDDGSLWGGSD-EGLEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFK 73
           L + D   +G SD E   E   L  E ++R  +FH+ GYRDG++AGKEA AQEG+N G+K
Sbjct: 22  LSKHDDPFYGSSDEEDYSEARVLGNENKQRRVKFHSAGYRDGIVAGKEAIAQEGYNFGYK 81

Query: 74  QSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFN 133
           +SV  GY+ GLVRGVSS LA LPD+L+EKL+  +E   KFQ L+   ++LST  A++ F 
Sbjct: 82  ESVLNGYQFGLVRGVSSALAFLPDELREKLIDKQETREKFQKLHSSVHALSTEVAMKRFY 141

Query: 134 DEILA----QDMTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKV 186
           + +      +   EE  D+ ++S +   +    D   LG +  EL +LL KSP ++V
Sbjct: 142 ETLTTKQGEEKSGEEGPDSCSDSGSGSGVNVTTD---LGSYVTELSSLLDKSPTIEV 195

[Close]

BLAST of MS004251 vs. TAIR 10
Match: AT1G34550.1 (Protein of unknown function (DUF616) )

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05
Identity = 33/102 (32.35%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 89  SVLACLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQDMTEECVDAD 148
           +VLA LPD+L+EKL+  +E   KFQ L+   ++LST  A++ F   +     T+E +   
Sbjct: 3   NVLAFLPDELREKLIDEQETREKFQRLHSYVHALSTEVAMKRFYGAL----TTKEGISGS 62

Query: 149 TNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHED 191
             + T             G +  EL +LL KSP ++  L +D
Sbjct: 63  GVNAT----------SDWGSYVTELSSLLEKSPKIERVLIDD 90

The following BLAST results are available for this feature:

BLAST of MS004251 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138890.1	5.0e-99	98.37	uncharacterized protein LOC111009960 [Momordica charantia]	[more]
XP_023514291.1	6.7e-80	82.61	uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023514282.1	6.7e-80	82.61	uncharacterized protein LOC111778596 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6601147.1	8.8e-80	82.61	Crossover junction endonuclease MUS81, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7031946.1	8.8e-80	82.61	hypothetical protein SDJN02_05988 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS004251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NRH1	4.3e-05	37.18	Protein YAE1 homolog OS=Homo sapiens OX=9606 GN=YAE1 PE=1 SV=1	[more]

BLAST of MS004251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAS2	2.4e-99	98.37	uncharacterized protein LOC111009960 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1H273	2.8e-79	82.61	uncharacterized protein LOC111458903 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A6J1JRH1	1.8e-78	82.07	uncharacterized protein LOC111487537 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JR95	1.8e-78	82.07	uncharacterized protein LOC111487537 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JSZ3	1.8e-78	82.07	uncharacterized protein LOC111487537 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS004251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34570.1	1.4e-30	41.42	Essential protein Yae1, N-terminal	[more]
AT3G15750.1	6.8e-30	42.37	Essential protein Yae1, N-terminal	[more]
AT1G34550.1	2.0e-05	32.35	Protein of unknown function (DUF616)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019191	Essential protein Yae1, N-terminal	PFAM	PF09811	Yae1_N	coord: 50..87 e-value: 1.2E-9 score: 37.8
IPR038881	Yae1-like	PANTHER	PTHR18829	PROTEIN YAE1 HOMOLOG	coord: 12..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004251.1	MS004251.1	mRNA