Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGCTTCTTCTGCTCCTCTCTGCTCCTTCCATTTCCGCAGTCCGTCTTCTTGGCGGCGAAGGCCAGCGGCGGACCACCGCAGAGCGCCGAGATGCCACAGCGGCGTCAGCGACGATGAAGGTCTCAGGCCTGTGACTGTGTGTAATATCGATCGGCGATCTCTTTATAGTTCATTAATGCATAATGTTCTGTTTTGTGCGTTCTGCAGAAAACCAGAAGGACATCGTGGAGGCGAACTTGACGGTGTTGAGAGAGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGATTCCGGCGAGTGGCGGAAGAATCGAATTCGATAATTGCTGGAGCTACCTGTCGAGGAGCGATGCGAAATTGGATCGCGATTGTGAGCGGAAGATGGTGAAGAATTTTGCCCTAATTTCAGAGTGCTTGGAGGTGATTTCTATGGCTGGTGGTGCAGTTGGACTCGTTCTTGTTGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTCCTGATTCGTCATCTAAGT
mRNA sequence
ACGGCTTCTTCTGCTCCTCTCTGCTCCTTCCATTTCCGCAGTCCGTCTTCTTGGCGGCGAAGGCCAGCGGCGGACCACCGCAGAGCGCCGAGATGCCACAGCGGCGTCAGCGACGATGAAGAAAACCAGAAGGACATCGTGGAGGCGAACTTGACGGTGTTGAGAGAGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGATTCCGGCGAGTGGCGGAAGAATCGAATTCGATAATTGCTGGAGCTACCTGTCGAGGAGCGATGCGAAATTGGATCGCGATTGTGAGCGGAAGATGGTGAAGAATTTTGCCCTAATTTCAGAGTGCTTGGAGGTGATTTCTATGGCTGGTGGTGCAGTTGGACTCGTTCTTGTTGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTCCTGATTCGTCATCTAAGT
Coding sequence (CDS)
ACGGCTTCTTCTGCTCCTCTCTGCTCCTTCCATTTCCGCAGTCCGTCTTCTTGGCGGCGAAGGCCAGCGGCGGACCACCGCAGAGCGCCGAGATGCCACAGCGGCGTCAGCGACGATGAAGAAAACCAGAAGGACATCGTGGAGGCGAACTTGACGGTGTTGAGAGAGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGATTCCGGCGAGTGGCGGAAGAATCGAATTCGATAATTGCTGGAGCTACCTGTCGAGGAGCGATGCGAAATTGGATCGCGATTGTGAGCGGAAGATGGTGAAGAATTTTGCCCTAATTTCAGAGTGCTTGGAGGTGATTTCTATGGCTGGTGGTGCAGTTGGACTCGTTCTTGTTGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTCCTGATTCGTCATCTAAGT
Protein sequence
TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRHLS
Homology
BLAST of MS004100 vs. NCBI nr
Match:
XP_022150638.1 (uncharacterized protein LOC111018723 [Momordica charantia])
HSP 1 Score: 280.4 bits (716), Expect = 8.5e-72
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMED 60
TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMED
Sbjct: 4 TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMED 63
Query: 61 LRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALISECLEVISMAGGAV 120
LRKKERRIPASGGRIEFDNCWSY+SRSDAKLDRDCERKMVKNFALISECLEVISMAGGAV
Sbjct: 64 LRKKERRIPASGGRIEFDNCWSYMSRSDAKLDRDCERKMVKNFALISECLEVISMAGGAV 123
Query: 121 GLVLVGGSLGICLVSLLIRHLS 143
GLVLVGGSLGICLVSLLIRHLS
Sbjct: 124 GLVLVGGSLGICLVSLLIRHLS 145
BLAST of MS004100 vs. NCBI nr
Match:
XP_038893300.1 (uncharacterized protein LOC120082131 isoform X1 [Benincasa hispida])
HSP 1 Score: 177.9 bits (450), Expect = 6.0e-41
Identity = 100/141 (70.92%), Postives = 112/141 (79.43%), Query Frame = 0
Query: 3 SSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLR 62
+SA SFHF SP S RRRP +DHRRAPRCH GV DEENQKDIV+ANLTVLR RMEDLR
Sbjct: 2 ASARFPSFHFHSPVSTRRRP-SDHRRAPRCHGGVG-DEENQKDIVDANLTVLRARMEDLR 61
Query: 63 KKERRI--PASGGRIEFDNCWSYLSRSD-AKLDRDCERKMVKNFALISECLEVISMAGGA 122
KKERRI PA G +EFDN W YLS SD AK DR + K++K FALI+ CLEV++ GGA
Sbjct: 62 KKERRIPLPARRGGLEFDNGWRYLSMSDGAKFDRSFDGKILKKFALIAGCLEVVTTVGGA 121
Query: 123 VGLVLVGGSLGICLVSLLIRH 141
VGLV VGGSLGICLV+LL+RH
Sbjct: 122 VGLVFVGGSLGICLVALLVRH 140
BLAST of MS004100 vs. NCBI nr
Match:
XP_011655810.1 (uncharacterized protein LOC105435587 [Cucumis sativus] >KGN52133.1 hypothetical protein Csa_008386 [Cucumis sativus])
HSP 1 Score: 149.1 bits (375), Expect = 3.0e-32
Identity = 91/143 (63.64%), Postives = 102/143 (71.33%), Query Frame = 0
Query: 3 SSAPLCSFH-FRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDL 62
+SAPL SFH F +PSS RRRP +DHR APRCH G + DEEN+KDIVEANLTVLR RMEDL
Sbjct: 2 ASAPLPSFHYFHTPSSLRRRPLSDHRSAPRCH-GRAGDEENEKDIVEANLTVLRTRMEDL 61
Query: 63 RKKERRIP---ASGGRIEFDNCWSYLSRSDAKLDRDC-ERKMVKNFALISECLEVISMAG 122
RKKER IP G E D+ YL KLD C + K +KN LIS CLEV+S G
Sbjct: 62 RKKERGIPIQIRQRGMEELDDGGRYL----WKLDGGCFDGKKMKNCGLISGCLEVVSRVG 121
Query: 123 GAVGLVLVGGSLGICLVSLLIRH 141
GAVGLV VGGSLGIC VS ++RH
Sbjct: 122 GAVGLVFVGGSLGICFVSFIVRH 139
BLAST of MS004100 vs. NCBI nr
Match:
XP_008446686.1 (PREDICTED: uncharacterized protein LOC103489333 [Cucumis melo] >KAA0034606.1 uncharacterized protein E6C27_scaffold65G006220 [Cucumis melo var. makuwa] >TYK09158.1 uncharacterized protein E5676_scaffold475G001490 [Cucumis melo var. makuwa])
HSP 1 Score: 148.7 bits (374), Expect = 3.9e-32
Identity = 92/145 (63.45%), Postives = 104/145 (71.72%), Query Frame = 0
Query: 2 ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDL 61
ASSA L SFH+ P S R+R +DH APRCHS + DEEN+KDIVEANLTVLR RMEDL
Sbjct: 2 ASSAGLPSFHYFHPPSSRQRRPSDHCSAPRCHSR-AGDEENEKDIVEANLTVLRTRMEDL 61
Query: 62 RKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-ERKMVKNFALISECLEVISM 121
RKKERRIP G EFD+ YLS +KLD C + K +KN ALIS CLEV+S
Sbjct: 62 RKKERRIPIPIPIRQRGMEEFDDGRRYLS---SKLDGGCFDGKKLKNGALISGCLEVVST 121
Query: 122 AGGAVGLVLVGGSLGICLVSLLIRH 141
GGAVGLV VGGSLGICLVS ++RH
Sbjct: 122 VGGAVGLVFVGGSLGICLVSFIVRH 142
BLAST of MS004100 vs. NCBI nr
Match:
KAG7032048.1 (hypothetical protein SDJN02_06090, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 128.3 bits (321), Expect = 5.4e-26
Identity = 73/107 (68.22%), Postives = 80/107 (74.77%), Query Frame = 0
Query: 12 FRSPSSWRRRPAADHRRAPRCHSGVSDD--EENQKDIVEANLTVLRERMEDLRKKERRIP 71
F +PS WRRRP +DHRRAPRCH GV D+ NQKDIVEANLTVL+ RMEDLRKKERRIP
Sbjct: 14 FYAPSPWRRRP-SDHRRAPRCHGGVGDEGPGPNQKDIVEANLTVLKARMEDLRKKERRIP 73
Query: 72 ASG--GRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALISECLEVIS 115
G +E DN W Y S DAKLD RK+VKNFALIS CLEV+S
Sbjct: 74 LPKRLGGVEIDNGWRYRSTRDAKLD----RKVVKNFALISGCLEVMS 115
BLAST of MS004100 vs. ExPASy TrEMBL
Match:
A0A6J1D9Z1 (uncharacterized protein LOC111018723 OS=Momordica charantia OX=3673 GN=LOC111018723 PE=4 SV=1)
HSP 1 Score: 280.4 bits (716), Expect = 4.1e-72
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMED 60
TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMED
Sbjct: 4 TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMED 63
Query: 61 LRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALISECLEVISMAGGAV 120
LRKKERRIPASGGRIEFDNCWSY+SRSDAKLDRDCERKMVKNFALISECLEVISMAGGAV
Sbjct: 64 LRKKERRIPASGGRIEFDNCWSYMSRSDAKLDRDCERKMVKNFALISECLEVISMAGGAV 123
Query: 121 GLVLVGGSLGICLVSLLIRHLS 143
GLVLVGGSLGICLVSLLIRHLS
Sbjct: 124 GLVLVGGSLGICLVSLLIRHLS 145
BLAST of MS004100 vs. ExPASy TrEMBL
Match:
A0A0A0KRA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611640 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 1.4e-32
Identity = 91/143 (63.64%), Postives = 102/143 (71.33%), Query Frame = 0
Query: 3 SSAPLCSFH-FRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDL 62
+SAPL SFH F +PSS RRRP +DHR APRCH G + DEEN+KDIVEANLTVLR RMEDL
Sbjct: 2 ASAPLPSFHYFHTPSSLRRRPLSDHRSAPRCH-GRAGDEENEKDIVEANLTVLRTRMEDL 61
Query: 63 RKKERRIP---ASGGRIEFDNCWSYLSRSDAKLDRDC-ERKMVKNFALISECLEVISMAG 122
RKKER IP G E D+ YL KLD C + K +KN LIS CLEV+S G
Sbjct: 62 RKKERGIPIQIRQRGMEELDDGGRYL----WKLDGGCFDGKKMKNCGLISGCLEVVSRVG 121
Query: 123 GAVGLVLVGGSLGICLVSLLIRH 141
GAVGLV VGGSLGIC VS ++RH
Sbjct: 122 GAVGLVFVGGSLGICFVSFIVRH 139
BLAST of MS004100 vs. ExPASy TrEMBL
Match:
A0A5A7SXL4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001490 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 1.9e-32
Identity = 92/145 (63.45%), Postives = 104/145 (71.72%), Query Frame = 0
Query: 2 ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDL 61
ASSA L SFH+ P S R+R +DH APRCHS + DEEN+KDIVEANLTVLR RMEDL
Sbjct: 2 ASSAGLPSFHYFHPPSSRQRRPSDHCSAPRCHSR-AGDEENEKDIVEANLTVLRTRMEDL 61
Query: 62 RKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-ERKMVKNFALISECLEVISM 121
RKKERRIP G EFD+ YLS +KLD C + K +KN ALIS CLEV+S
Sbjct: 62 RKKERRIPIPIPIRQRGMEEFDDGRRYLS---SKLDGGCFDGKKLKNGALISGCLEVVST 121
Query: 122 AGGAVGLVLVGGSLGICLVSLLIRH 141
GGAVGLV VGGSLGICLVS ++RH
Sbjct: 122 VGGAVGLVFVGGSLGICLVSFIVRH 142
BLAST of MS004100 vs. ExPASy TrEMBL
Match:
A0A1S3BFP0 (uncharacterized protein LOC103489333 OS=Cucumis melo OX=3656 GN=LOC103489333 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 1.9e-32
Identity = 92/145 (63.45%), Postives = 104/145 (71.72%), Query Frame = 0
Query: 2 ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDL 61
ASSA L SFH+ P S R+R +DH APRCHS + DEEN+KDIVEANLTVLR RMEDL
Sbjct: 2 ASSAGLPSFHYFHPPSSRQRRPSDHCSAPRCHSR-AGDEENEKDIVEANLTVLRTRMEDL 61
Query: 62 RKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-ERKMVKNFALISECLEVISM 121
RKKERRIP G EFD+ YLS +KLD C + K +KN ALIS CLEV+S
Sbjct: 62 RKKERRIPIPIPIRQRGMEEFDDGRRYLS---SKLDGGCFDGKKLKNGALISGCLEVVST 121
Query: 122 AGGAVGLVLVGGSLGICLVSLLIRH 141
GGAVGLV VGGSLGICLVS ++RH
Sbjct: 122 VGGAVGLVFVGGSLGICLVSFIVRH 142
BLAST of MS004100 vs. ExPASy TrEMBL
Match:
A0A1Q3D7T7 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31944 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 0
Query: 30 PRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKER----RIPASGGRIEFDNCWSYLS 89
P+ S DE N +IV+ANL+ L ER+ ++RKKE R+ G+++ N W+Y S
Sbjct: 24 PQVRSHSFRDEGNSANIVDANLSTLWERIAEVRKKESLDCCRLKKEEGKLK--NGWNYQS 83
Query: 90 RSDAKLDRDCERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLI 139
D RD A++SE +E+I GA+G+V++ GSL ICLVSLL+
Sbjct: 84 GYDHNRKRD---------AMMSESMELIGFVSGALGMVILSGSLCICLVSLLV 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150638.1 | 8.5e-72 | 99.30 | uncharacterized protein LOC111018723 [Momordica charantia] | [more] |
XP_038893300.1 | 6.0e-41 | 70.92 | uncharacterized protein LOC120082131 isoform X1 [Benincasa hispida] | [more] |
XP_011655810.1 | 3.0e-32 | 63.64 | uncharacterized protein LOC105435587 [Cucumis sativus] >KGN52133.1 hypothetical ... | [more] |
XP_008446686.1 | 3.9e-32 | 63.45 | PREDICTED: uncharacterized protein LOC103489333 [Cucumis melo] >KAA0034606.1 unc... | [more] |
KAG7032048.1 | 5.4e-26 | 68.22 | hypothetical protein SDJN02_06090, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D9Z1 | 4.1e-72 | 99.30 | uncharacterized protein LOC111018723 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A0A0KRA6 | 1.4e-32 | 63.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611640 PE=4 SV=1 | [more] |
A0A5A7SXL4 | 1.9e-32 | 63.45 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BFP0 | 1.9e-32 | 63.45 | uncharacterized protein LOC103489333 OS=Cucumis melo OX=3656 GN=LOC103489333 PE=... | [more] |
A0A1Q3D7T7 | 1.6e-07 | 39.82 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31944 PE=4... | [more] |
Match Name | E-value | Identity | Description | |