MS004001 (gene) Bitter gourd (TR) v1

Overview
NameMS004001
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold1597: 444609 .. 444719 (-)
RNA-Seq ExpressionMS004001
SyntenyMS004001
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTGCCCCAGAGAAGAACGACGGCGCTACATCCATCAAAATAAGAGAGATTTTGAGCTGCCATCAGACGACATTCAATGCCACGGTTTTCTTTTCTATCCTGCCAAT

mRNA sequence

ATGGGCTGCCCCAGAGAAGAACGACGGCGCTACATCCATCAAAATAAGAGAGATTTTGAGCTGCCATCAGACGACATTCAATGCCACGGTTTTCTTTTCTATCCTGCCAAT

Coding sequence (CDS)

ATGGGCTGCCCCAGAGAAGAACGACGGCGCTACATCCATCAAAATAAGAGAGATTTTGAGCTGCCATCAGACGACATTCAATGCCACGGTTTTCTTTTCTATCCTGCCAAT

Protein sequence

MGCPREERRRYIHQNKRDFELPSDDIQCHGFLFYPAN
Homology
[Close]
BLAST of MS004001 vs. NCBI nr
Match: KGN64065.1 (hypothetical protein Csa_014015 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-08
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 1  MGCPREERRRYIHQNKRDFELPSDDIQCHGFLFYPAN 38
          MGCPREERRRYI Q +R+FELPS+DIQCH  LF PAN
Sbjct: 1  MGCPREERRRYIQQKERNFELPSNDIQCHTLLFCPAN 37

[Close]
BLAST of MS004001 vs. ExPASy TrEMBL
Match: A0A0A0LQ99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039300 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-08
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 1  MGCPREERRRYIHQNKRDFELPSDDIQCHGFLFYPAN 38
          MGCPREERRRYI Q +R+FELPS+DIQCH  LF PAN
Sbjct: 1  MGCPREERRRYIQQKERNFELPSNDIQCHTLLFCPAN 37

The following BLAST results are available for this feature:
BLAST of MS004001 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64065.12.3e-0878.38hypothetical protein Csa_014015 [Cucumis sativus][more]
BLAST of MS004001 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS004001 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ991.1e-0878.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039300 PE=4 SV=1[more]
BLAST of MS004001 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS004001.1MS004001.1mRNA