Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGGCTTCATCCTCCTTTTTCCAAACCCTAAAGCGGTATATCAAGAAGCCCTGGGAGATCACCGGCCCCTGTGCGGATCCAGAGTACAGATTGGCCGTGCCGAGCGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGCAGAAGGCCATCGTTCCTACCTCGAATCCAGAAACTGTCTTCGACATCAAGTATTTCAGCCGCGACCAGCGTCGCAATCGCCCTCCAATTAGACGCACCATCCTCAAGAAATCTGACGTCGAGAAGATCATGATGGAGACCAATTTCGAACCCGCTGATTTCCCCAAAGTTTATCTGACGGCCACGATCGAGGAGGATATCAATACCCATGGAGGAGGTTATCAGAAG
mRNA sequence
ATGGCGAAGGCTTCATCCTCCTTTTTCCAAACCCTAAAGCGGTATATCAAGAAGCCCTGGGAGATCACCGGCCCCTGTGCGGATCCAGAGTACAGATTGGCCGTGCCGAGCGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGCAGAAGGCCATCGTTCCTACCTCGAATCCAGAAACTGTCTTCGACATCAAGTATTTCAGCCGCGACCAGCGTCGCAATCGCCCTCCAATTAGACGCACCATCCTCAAGAAATCTGACGTCGAGAAGATCATGATGGAGACCAATTTCGAACCCGCTGATTTCCCCAAAGTTTATCTGACGGCCACGATCGAGGAGGATATCAATACCCATGGAGGAGGTTATCAGAAG
Coding sequence (CDS)
ATGGCGAAGGCTTCATCCTCCTTTTTCCAAACCCTAAAGCGGTATATCAAGAAGCCCTGGGAGATCACCGGCCCCTGTGCGGATCCAGAGTACAGATTGGCCGTGCCGAGCGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGCAGAAGGCCATCGTTCCTACCTCGAATCCAGAAACTGTCTTCGACATCAAGTATTTCAGCCGCGACCAGCGTCGCAATCGCCCTCCAATTAGACGCACCATCCTCAAGAAATCTGACGTCGAGAAGATCATGATGGAGACCAATTTCGAACCCGCTGATTTCCCCAAAGTTTATCTGACGGCCACGATCGAGGAGGATATCAATACCCATGGAGGAGGTTATCAGAAG
Protein sequence
MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTHGGGYQK
Homology
BLAST of MS003997 vs. NCBI nr
Match:
XP_022137544.1 (uncharacterized protein LOC111008967 [Momordica charantia])
HSP 1 Score: 259.2 bits (661), Expect = 1.8e-65
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP
Sbjct: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKYFSRDQRRN PPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH
Sbjct: 61 ETVFDIKYFSRDQRRNLPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 121 GGGYQK 126
BLAST of MS003997 vs. NCBI nr
Match:
XP_023001049.1 (uncharacterized protein LOC111495303 [Cucurbita maxima] >XP_023001050.1 uncharacterized protein LOC111495303 [Cucurbita maxima])
HSP 1 Score: 241.1 bits (614), Expect = 5.1e-60
Identity = 114/126 (90.48%), Postives = 120/126 (95.24%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPA+TK+KAIVPTSNP
Sbjct: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPASTKEKAIVPTSNP 60
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKY+SRDQRRNRPPIRRTILKK DVEK+M ET F+PADFPKVYLTA IEEDIN
Sbjct: 61 ETVFDIKYYSRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 121 GGGYQK 126
BLAST of MS003997 vs. NCBI nr
Match:
XP_022923781.1 (uncharacterized protein LOC111431390, partial [Cucurbita moschata])
HSP 1 Score: 240.4 bits (612), Expect = 8.7e-60
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPATTK+KAIVPTSNP
Sbjct: 22 MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 81
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+PADFPKVYLTA IEED+N
Sbjct: 82 ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 141
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 142 GGGYQK 147
BLAST of MS003997 vs. NCBI nr
Match:
XP_038895860.1 (uncharacterized protein LOC120084028 [Benincasa hispida])
HSP 1 Score: 238.0 bits (606), Expect = 4.3e-59
Identity = 112/126 (88.89%), Postives = 118/126 (93.65%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSS FQTLKRY KKPWEITGPCADPEYRLAVPSA+EYRVFCPATTK+KAIVPTSNP
Sbjct: 49 MAKASSSLFQTLKRYFKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNP 108
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+PADFPKVYLTA IEEDIN
Sbjct: 109 ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETRFDPADFPKVYLTAAIEEDINAR 168
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 169 GGGYQK 174
BLAST of MS003997 vs. NCBI nr
Match:
XP_023520186.1 (uncharacterized protein LOC111783486 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 236.9 bits (603), Expect = 9.6e-59
Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYR+ CPA+TK+KAIVPTSNP
Sbjct: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRIVCPASTKEKAIVPTSNP 60
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+PADFPKVYLTA IEEDIN
Sbjct: 61 ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 121 GGGYQK 126
BLAST of MS003997 vs. ExPASy TrEMBL
Match:
A0A6J1C7I4 (uncharacterized protein LOC111008967 OS=Momordica charantia OX=3673 GN=LOC111008967 PE=4 SV=1)
HSP 1 Score: 259.2 bits (661), Expect = 8.8e-66
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP
Sbjct: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKYFSRDQRRN PPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH
Sbjct: 61 ETVFDIKYFSRDQRRNLPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 121 GGGYQK 126
BLAST of MS003997 vs. ExPASy TrEMBL
Match:
A0A6J1KK07 (uncharacterized protein LOC111495303 OS=Cucurbita maxima OX=3661 GN=LOC111495303 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 114/126 (90.48%), Postives = 120/126 (95.24%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPA+TK+KAIVPTSNP
Sbjct: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPASTKEKAIVPTSNP 60
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKY+SRDQRRNRPPIRRTILKK DVEK+M ET F+PADFPKVYLTA IEEDIN
Sbjct: 61 ETVFDIKYYSRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 121 GGGYQK 126
BLAST of MS003997 vs. ExPASy TrEMBL
Match:
A0A6J1E7N6 (uncharacterized protein LOC111431390 OS=Cucurbita moschata OX=3662 GN=LOC111431390 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 4.2e-60
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPATTK+KAIVPTSNP
Sbjct: 22 MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 81
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+PADFPKVYLTA IEED+N
Sbjct: 82 ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 141
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 142 GGGYQK 147
BLAST of MS003997 vs. ExPASy TrEMBL
Match:
A0A6J1GSY9 (uncharacterized protein LOC111456682 OS=Cucurbita moschata OX=3662 GN=LOC111456682 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 3.3e-57
Identity = 108/126 (85.71%), Postives = 116/126 (92.06%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKASSS FQTLKR+IKKPWEITGPCADPEYR AVPSA+EYRVFCPATTKQK IVPTSNP
Sbjct: 63 MAKASSSLFQTLKRFIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKQKPIVPTSNP 122
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
+TVFDIKY+SRDQRRNRPPIRR ILKK D+E++M ET F+PADFPKVYLTA IEEDIN
Sbjct: 123 QTVFDIKYYSRDQRRNRPPIRRIILKKPDIEQMMKETKFDPADFPKVYLTAAIEEDINAR 182
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 183 GGGYQK 188
BLAST of MS003997 vs. ExPASy TrEMBL
Match:
A0A0A0LVM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039260 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
MAKA+SS QTL+RYIKKPWEITGPCADPEYR AVPSA+EYRV CPAT K+KAI+PTSNP
Sbjct: 1 MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLTATIEEDINTH 120
ETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M E F+PADFPKVYLTA IEED+NTH
Sbjct: 61 ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
Query: 121 GGGYQK 127
GGGYQK
Sbjct: 121 GGGYQK 126
BLAST of MS003997 vs. TAIR 10
Match:
AT5G08060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 169.1 bits (427), Expect = 2.3e-42
Identity = 79/127 (62.20%), Postives = 102/127 (80.31%), Query Frame = 0
Query: 1 MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNP 60
++ A+SS Q L+RYIKKPW+ITGPCA PEY AVP A EYR+ CPAT ++AIVP+S+P
Sbjct: 5 VSTAASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVPSSDP 64
Query: 61 ETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMME-TNFEPADFPKVYLTATIEEDINT 120
ETV++I Y RDQRRNRPPIRR +L K +V ++M E +F+ +DFPKVYLT T+EED++T
Sbjct: 65 ETVYNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEEDLDT 124
Query: 121 HGGGYQK 127
GGGY+K
Sbjct: 125 RGGGYEK 131
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022137544.1 | 1.8e-65 | 99.21 | uncharacterized protein LOC111008967 [Momordica charantia] | [more] |
XP_023001049.1 | 5.1e-60 | 90.48 | uncharacterized protein LOC111495303 [Cucurbita maxima] >XP_023001050.1 uncharac... | [more] |
XP_022923781.1 | 8.7e-60 | 89.68 | uncharacterized protein LOC111431390, partial [Cucurbita moschata] | [more] |
XP_038895860.1 | 4.3e-59 | 88.89 | uncharacterized protein LOC120084028 [Benincasa hispida] | [more] |
XP_023520186.1 | 9.6e-59 | 88.10 | uncharacterized protein LOC111783486 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C7I4 | 8.8e-66 | 99.21 | uncharacterized protein LOC111008967 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A6J1KK07 | 2.5e-60 | 90.48 | uncharacterized protein LOC111495303 OS=Cucurbita maxima OX=3661 GN=LOC111495303... | [more] |
A0A6J1E7N6 | 4.2e-60 | 89.68 | uncharacterized protein LOC111431390 OS=Cucurbita moschata OX=3662 GN=LOC1114313... | [more] |
A0A6J1GSY9 | 3.3e-57 | 85.71 | uncharacterized protein LOC111456682 OS=Cucurbita moschata OX=3662 GN=LOC1114566... | [more] |
A0A0A0LVM5 | 1.3e-56 | 84.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039260 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G08060.1 | 2.3e-42 | 62.20 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |