MS003995 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGACGCTTCGAGTTCGATGAAGAAGGTGAAGAATTTTATCTGTTCCGGAACTTCGAATTCGGTGGAGACGGTGAGATCGTTTCTCAATTCTCAGATTCATGACGAGGAAAAGTGGGCCTTGAACATGGTACTCTTCCAATAATTTCAATTTAAATTCTAAATCTGTCGCTTTGTTCTTAATTTGGATTTTTTTCACCCCACGATTTGTTAGTGGGATTTCTAGGACTGGGCAACAACTTTTTTTTTTGTCGCATTATTAATCCGTTTCAATGTCTTGTACTCTATTTATTAGTTGAGAAAGTTTAAGAAGTCATGAGACTCTTGTTAGTTTCAGGAATCAAAGTATAAAATGCCGATCCTTTACTGGAAAAGCGCATTTGAGAGTCGAACGCTAGTATACTTAATTTATCCTAAAAAGTTGTTATAATTGCTTCGAGAATAAAGAAATTTAAGGAAGAAAAATAATTTTTCTCGGAGATAGGTCTTGAGGACATTTTGTCATATATTCAATTACTTGTTTGATGGGCTATTCTGAAGTTATATTCATTTATAGCTTTAACATTCTCTTCATCTCAATTTGCATGCTCCGTTCTGTTTCACACCTTAATTTTTTGTTGTCTTAAACTATGAGTATCTTTTTTTCCCACCTTTTCTTTCTTCTCTTGTGAAATACATAAGAGAAATTAAAGAAGTCTTTTGGTTTTTGGTAATTACCAACGGGAGCAGGTTTGCCCTTGTTTAGTACTTGGCTGAGAGGATTGAAGGGGAGGGTTGAACGCAATGGATTTGATCTAATGGAAGAGATGTTATTTGGGTTTACTTTATGACTTGAATAATGGAAATTCCAAATGAGAATTATAGTACTTTATAAATTCATGGCTTTAACTTGATGAACTTCGTCAGAAGCTTTGGTTGGTTCTGTGTATATTTCCCATCTCATTCAAATTGAATAATTTGCATAAAGTTCTATGATCTATTCCGTCTTTCAAGTTTTGGGTAAGAGTTGCCAATGCATGATAACTATCTTATCTCTTGTAATGTAACCGTGGCACGTGTGTCATGCCATCTTATTAAAGCTAAAACATGAGACTGAATCTGACGATGACTTTCATTTCTTCTGCTTCTGCCATGCCAATAAGCATCATAGCTGTTGCTGTACATGAATTTGGATGCAATAAAAGAATGCTTTTGCACTAAGAAGAGAGACCAATGCCACTGAATTGGTTGTACCATAGCAGTTTTGCTGCCATAATTCATTATTTGGGAGAAATAATCTTTAACTAAGATTTTGAAGAGAAAAACCATGCTTATGGGAATTCTGTGTGGCTTAACTGTTAATCCTCATTCCCCACTTCTATGAAGAAGTATCATTTTGATTTTTGCTTATACTGTTGGTACCAAAACACAACATTTTTCAAGTATGGTTGTATATCATCAGTTATATAAAACGTTAACTTGAACTTCCTTTTTTTGTTGCAGAAATTGCTTCGAGCAGCTGGAATGTTTGCAGGATCTATCCTTCTCATGCGGAATTATGGTGATCTTATGGCAATA ATGGCGGACGCTTCGAGTTCGATGAAGAAGGTGAAGAATTTTATCTGTTCCGGAACTTCGAATTCGGTGGAGACGGTGAGATCGTTTCTCAATTCTCAGATTCATGACGAGGAAAAGTGGGCCTTGAACATGAAATTGCTTCGAGCAGCTGGAATGTTTGCAGGATCTATCCTTCTCATGCGGAATTATGGTGATCTTATGGCAATA ATGGCGGACGCTTCGAGTTCGATGAAGAAGGTGAAGAATTTTATCTGTTCCGGAACTTCGAATTCGGTGGAGACGGTGAGATCGTTTCTCAATTCTCAGATTCATGACGAGGAAAAGTGGGCCTTGAACATGAAATTGCTTCGAGCAGCTGGAATGTTTGCAGGATCTATCCTTCTCATGCGGAATTATGGTGATCTTATGGCAATA MADASSSMKKVKNFICSGTSNSVETVRSFLNSQIHDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMAI Homology
BLAST of MS003995 vs. NCBI nr
Match: XP_022137624.1 (mitochondrial import receptor subunit TOM5 homolog [Momordica charantia]) HSP 1 Score: 134.8 bits (338), Expect = 2.8e-28 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of MS003995 vs. NCBI nr
Match: KAG6572899.1 (Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012088.1 Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.2 bits (308), Expect = 8.5e-25 Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 0
BLAST of MS003995 vs. NCBI nr
Match: XP_022924183.1 (mitochondrial import receptor subunit TOM5 homolog [Cucurbita moschata] >XP_023001126.1 mitochondrial import receptor subunit TOM5 homolog [Cucurbita maxima] >XP_023520288.1 mitochondrial import receptor subunit TOM5 homolog [Cucurbita pepo subsp. pepo] >KAG6584406.1 Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019992.1 Mitochondrial import receptor subunit TOM5-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 0
BLAST of MS003995 vs. NCBI nr
Match: XP_038894051.1 (mitochondrial import receptor subunit TOM5 homolog [Benincasa hispida]) HSP 1 Score: 118.2 bits (295), Expect = 2.7e-23 Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of MS003995 vs. NCBI nr
Match: XP_004137442.1 (mitochondrial import receptor subunit TOM5 homolog [Cucumis sativus] >XP_008451171.1 PREDICTED: mitochondrial import receptor subunit TOM5 homolog [Cucumis melo] >TYJ98941.1 mitochondrial import receptor subunit TOM5-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 115.5 bits (288), Expect = 1.8e-22 Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of MS003995 vs. ExPASy Swiss-Prot
Match: Q9SD80 (Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana OX=3702 GN=TOM5 PE=1 SV=3) HSP 1 Score: 70.9 bits (172), Expect = 6.6e-12 Identity = 29/48 (60.42%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of MS003995 vs. ExPASy TrEMBL
Match: A0A6J1C7R9 (mitochondrial import receptor subunit TOM5 homolog OS=Momordica charantia OX=3673 GN=LOC111009022 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of MS003995 vs. ExPASy TrEMBL
Match: A0A6J1KHR6 (mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495362 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.2e-25 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 0
BLAST of MS003995 vs. ExPASy TrEMBL
Match: A0A6J1EBN7 (mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431705 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.2e-25 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 0
BLAST of MS003995 vs. ExPASy TrEMBL
Match: A0A5D3BJP0 (Mitochondrial import receptor subunit TOM5-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001420 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 8.6e-23 Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of MS003995 vs. ExPASy TrEMBL
Match: A0A0A0LSV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039240 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 8.6e-23 Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of MS003995 vs. TAIR 10
Match: AT5G08040.1 (mitochondrial import receptor subunit TOM5 homolog ) HSP 1 Score: 70.9 bits (172), Expect = 4.7e-13 Identity = 29/48 (60.42%), Postives = 42/48 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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