Homology
BLAST of MS003990 vs. NCBI nr
Match:
XP_022137596.1 (glycine-rich RNA-binding protein 4, mitochondrial-like [Momordica charantia])
HSP 1 Score: 270.4 bits (690), Expect = 9.8e-69
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAFLSKVGKIFSQSSTRIGSDL+PSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG
Sbjct: 1 MAFLSKVGKIFSQSSTRIGSDLRPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRGGF 120
DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRGGF
Sbjct: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRGGF 120
Query: 121 GGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGSGY 158
GGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGS Y
Sbjct: 121 GGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGSSY 157
BLAST of MS003990 vs. NCBI nr
Match:
XP_022994220.1 (glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 200.7 bits (509), Expect = 9.5e-48
Identity = 124/151 (82.12%), Postives = 126/151 (83.44%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQP---SIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSKVGKIFSQSS +RIGS QP SIFQ IR MSSSKVFVGGLSYGTDD SLREAF
Sbjct: 1 MAFLSKVGKIFSQSSASRIGSISQPSQLSIFQAIRLMSSSKVFVGGLSYGTDDHSLREAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VVEARVILDRDTGRSRGFGFVTF NEEASSAIQALDGQDL GRRIRVNFATERS
Sbjct: 61 TKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASSAIQALDGQDLHGRRIRVNFATERS 120
Query: 121 RGGFGGGGGGYGGGGYGGGGNAGYGGGGGYG 148
RG F GGGGY GG GY GGGGYG
Sbjct: 121 RGSF------VGGGGYNSGGGGGYSGGGGYG 145
BLAST of MS003990 vs. NCBI nr
Match:
XP_022954706.1 (glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita moschata] >KAG7012092.1 Glycine-rich RNA-binding protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 198.0 bits (502), Expect = 6.2e-47
Identity = 125/151 (82.78%), Postives = 127/151 (84.11%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQP---SIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSKVGKIFSQSS +RIGS QP SIFQ IRFMSSSKVFVGGLSYGTDD SLREAF
Sbjct: 1 MAFLSKVGKIFSQSSASRIGSISQPSQLSIFQAIRFMSSSKVFVGGLSYGTDDHSLREAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VVEARVILDRDTGRSRGFGFVTF NEEASSAIQALDGQDL GRRIRVNFATERS
Sbjct: 61 TKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASSAIQALDGQDLHGRRIRVNFATERS 120
Query: 121 RGGFGGGGGGYGGGGYGGGGNAGYGGGGGYG 148
RG F GGGG GGGG GY GGGG G
Sbjct: 121 RGSFVGGGGYSGGGG-------GYSGGGGIG 144
BLAST of MS003990 vs. NCBI nr
Match:
KAG6572904.1 (Glycine-rich RNA-binding protein 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 197.6 bits (501), Expect = 8.1e-47
Identity = 124/151 (82.12%), Postives = 127/151 (84.11%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQP---SIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSKVGKIFSQSS +R+GS QP SIFQ IRFMSSSKVFVGGLSYGTDD SLREAF
Sbjct: 58 MAFLSKVGKIFSQSSASRVGSISQPSQLSIFQAIRFMSSSKVFVGGLSYGTDDHSLREAF 117
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VVEARVILDRDTGRSRGFGFVTF NEEASSAIQALDGQDL GRRIRVNFATERS
Sbjct: 118 TKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASSAIQALDGQDLHGRRIRVNFATERS 177
Query: 121 RGGFGGGGGGYGGGGYGGGGNAGYGGGGGYG 148
RG F GGGG GGGG GY GGGG G
Sbjct: 178 RGSFVGGGGYSGGGG-------GYSGGGGIG 201
BLAST of MS003990 vs. NCBI nr
Match:
XP_004137435.1 (glycine-rich RNA-binding protein 3, mitochondrial [Cucumis sativus])
HSP 1 Score: 193.0 bits (489), Expect = 2.0e-45
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQP---SIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSKVGKIFSQSS + I S QP S+FQT+RFMSSSKVFVGGLSYGTDDQ L EAF
Sbjct: 1 MAFLSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VVEARVI+DRDTGRSRGFGFVTF A+E+ASSAIQALDGQDLDGRRIR ++AT+R+
Sbjct: 61 TKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRA 120
Query: 121 RGGFGGGGGGYGGGGYGGGG-NAGYGGGGGYGRGGGGYGSG 157
GG GGGGG GGGGYGGGG G GG GG G GGGGYG G
Sbjct: 121 SGGGGGGGGYGGGGGYGGGGYGGGRGGYGGGGYGGGGYGGG 161
BLAST of MS003990 vs. ExPASy Swiss-Prot
Match:
Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 2.4e-38
Identity = 102/164 (62.20%), Postives = 126/164 (76.83%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTR-IGSDL---QPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSK G I Q++ + + + + PS+FQ IR MSSSK+F+GG++Y D+ SLREAF
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VV+ RVILDR+TGRSRGFGFVTF ++E ASSAIQALDG+DL GR ++VN+A +R+
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120
Query: 121 R------GGFGGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYG 155
GG+GGGGGGYGG G GGG GYGG GGYG G GGYG
Sbjct: 121 SGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYG 164
BLAST of MS003990 vs. ExPASy Swiss-Prot
Match:
Q9C909 (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 4.3e-35
Identity = 105/169 (62.13%), Postives = 127/169 (75.15%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAFLSKVG++FSQ+S+ + + S+ Q+IR MSSSK+FVGG+SY TD+ LREAF+KYG
Sbjct: 1 MAFLSKVGRLFSQTSSHVTA--SSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRG-- 120
+VV+A++I+DR+TGRSRGF FVTF + EEAS+A+Q LDGQDL GRRIRVN+ATER G
Sbjct: 61 EVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERGSGFG 120
Query: 121 --GFGGGGGGYGG--GGYG------GGGNAGYGGGGGY---GRGGGGYG 155
GFGG GGGYG GGYG GGG GYGG Y GGGGYG
Sbjct: 121 GRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYG 166
BLAST of MS003990 vs. ExPASy Swiss-Prot
Match:
Q9LIS2 (Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG4 PE=2 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 9.3e-30
Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAF +K+ I Q ++ + S+ ++R+M SSK+FVGGLS+GTDD SL++AFT +G
Sbjct: 1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYM-SSKLFVGGLSWGTDDSSLKQAFTSFG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS---R 120
+V EA VI DR+TGRSRGFGFV+F+ + A++AI+ +DG++L+GR+IRVN ATERS R
Sbjct: 61 EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 120
Query: 121 GGFGGGGGGYGGGGYGG 135
F GGGGGYGGGG GG
Sbjct: 121 SSF-GGGGGYGGGGGGG 135
BLAST of MS003990 vs. ExPASy Swiss-Prot
Match:
Q9SVM8 (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG2 PE=1 SV=1)
HSP 1 Score: 119.8 bits (299), Expect = 2.8e-26
Identity = 87/158 (55.06%), Postives = 114/158 (72.15%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAF +K+G + Q+ + G+ S+ ++R M S+K+F+GGLS+GTDD SLR+AF +G
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLM-STKLFIGGLSWGTDDASLRDAFAHFG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRG-- 120
DVV+A+VI+DR+TGRSRGFGFV FN A++AI +DG++L+GR IRVN A +R
Sbjct: 61 DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 120
Query: 121 GFGGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGSG 157
+GGGGG GGGG GGG GYGGGGG G GGGG G G
Sbjct: 121 AYGGGGGYSGGGGGYGGGGGGYGGGGG-GYGGGGDGGG 156
BLAST of MS003990 vs. ExPASy Swiss-Prot
Match:
Q43472 (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 84/138 (60.87%), Postives = 99/138 (71.74%), Query Frame = 0
Query: 37 KVFVGGLSYGTDDQSLREAFTKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQA 96
+ FVGGL + TDDQSL+ AF+KYGDV+++++I DR+TGRSRGFGFVTF ++E AI+A
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 97 LDGQDLDGRRIRVNFATER---SRGGFGGGGGGY-------GGGGYGGGGNAGY-----G 156
++GQDLDGR I VN A R GGFGGGGGGY GGGGYGGGG GY G
Sbjct: 67 MNGQDLDGRNITVNEAQSRRSDGGGGFGGGGGGYGGQRREGGGGGYGGGG-GGYGGGRSG 126
BLAST of MS003990 vs. ExPASy TrEMBL
Match:
A0A6J1C734 (glycine-rich RNA-binding protein 4, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111009002 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 4.7e-69
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAFLSKVGKIFSQSSTRIGSDL+PSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG
Sbjct: 1 MAFLSKVGKIFSQSSTRIGSDLRPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRGGF 120
DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRGGF
Sbjct: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRGGF 120
Query: 121 GGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGSGY 158
GGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGS Y
Sbjct: 121 GGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGSSY 157
BLAST of MS003990 vs. ExPASy TrEMBL
Match:
A0A6J1K0M4 (glycine-rich RNA-binding protein 4, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111490023 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 4.6e-48
Identity = 124/151 (82.12%), Postives = 126/151 (83.44%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQP---SIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSKVGKIFSQSS +RIGS QP SIFQ IR MSSSKVFVGGLSYGTDD SLREAF
Sbjct: 1 MAFLSKVGKIFSQSSASRIGSISQPSQLSIFQAIRLMSSSKVFVGGLSYGTDDHSLREAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VVEARVILDRDTGRSRGFGFVTF NEEASSAIQALDGQDL GRRIRVNFATERS
Sbjct: 61 TKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASSAIQALDGQDLHGRRIRVNFATERS 120
Query: 121 RGGFGGGGGGYGGGGYGGGGNAGYGGGGGYG 148
RG F GGGGY GG GY GGGGYG
Sbjct: 121 RGSF------VGGGGYNSGGGGGYSGGGGYG 145
BLAST of MS003990 vs. ExPASy TrEMBL
Match:
A0A6J1GRM7 (glycine-rich RNA-binding protein 4, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111456883 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 3.0e-47
Identity = 125/151 (82.78%), Postives = 127/151 (84.11%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQP---SIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSKVGKIFSQSS +RIGS QP SIFQ IRFMSSSKVFVGGLSYGTDD SLREAF
Sbjct: 1 MAFLSKVGKIFSQSSASRIGSISQPSQLSIFQAIRFMSSSKVFVGGLSYGTDDHSLREAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VVEARVILDRDTGRSRGFGFVTF NEEASSAIQALDGQDL GRRIRVNFATERS
Sbjct: 61 TKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASSAIQALDGQDLHGRRIRVNFATERS 120
Query: 121 RGGFGGGGGGYGGGGYGGGGNAGYGGGGGYG 148
RG F GGGG GGGG GY GGGG G
Sbjct: 121 RGSFVGGGGYSGGGG-------GYSGGGGIG 144
BLAST of MS003990 vs. ExPASy TrEMBL
Match:
A0A0A0LQL8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039190 PE=4 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 9.6e-46
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQP---SIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSKVGKIFSQSS + I S QP S+FQT+RFMSSSKVFVGGLSYGTDDQ L EAF
Sbjct: 1 MAFLSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VVEARVI+DRDTGRSRGFGFVTF A+E+ASSAIQALDGQDLDGRRIR ++AT+R+
Sbjct: 61 TKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRA 120
Query: 121 RGGFGGGGGGYGGGGYGGGG-NAGYGGGGGYGRGGGGYGSG 157
GG GGGGG GGGGYGGGG G GG GG G GGGGYG G
Sbjct: 121 SGGGGGGGGYGGGGGYGGGGYGGGRGGYGGGGYGGGGYGGG 161
BLAST of MS003990 vs. ExPASy TrEMBL
Match:
A0A1S3BNP0 (glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103491813 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45
Identity = 124/158 (78.48%), Postives = 133/158 (84.18%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSS-TRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKY 60
MAFLSKVGK+FS SS + I S LQPS+FQTIR MSSSKVFVGGLSY TDDQ L E F KY
Sbjct: 1 MAFLSKVGKVFSNSSASGIRSHLQPSVFQTIRLMSSSKVFVGGLSYSTDDQRLTETFNKY 60
Query: 61 GDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRGG 120
G+VVEARVI DRD+GRSRGFGFVTF A+E+ASSAIQALDGQDLDGRRIR ++ATERS GG
Sbjct: 61 GEVVEARVITDRDSGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATERSSGG 120
Query: 121 FG-GGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYGSG 157
G GGGGGYGGGGY GGG GYGGG G GGGGYG G
Sbjct: 121 GGYGGGGGYGGGGYSGGG-GGYGGG---GYGGGGYGGG 154
BLAST of MS003990 vs. TAIR 10
Match:
AT5G61030.1 (glycine-rich RNA-binding protein 3 )
HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 102/164 (62.20%), Postives = 126/164 (76.83%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTR-IGSDL---QPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAF 60
MAFLSK G I Q++ + + + + PS+FQ IR MSSSK+F+GG++Y D+ SLREAF
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 61 TKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS 120
TKYG+VV+ RVILDR+TGRSRGFGFVTF ++E ASSAIQALDG+DL GR ++VN+A +R+
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120
Query: 121 R------GGFGGGGGGYGGGGYGGGGNAGYGGGGGYGRGGGGYG 155
GG+GGGGGGYGG G GGG GYGG GGYG G GGYG
Sbjct: 121 SGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYG 164
BLAST of MS003990 vs. TAIR 10
Match:
AT1G74230.1 (glycine-rich RNA-binding protein 5 )
HSP 1 Score: 149.1 bits (375), Expect = 3.1e-36
Identity = 105/169 (62.13%), Postives = 127/169 (75.15%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAFLSKVG++FSQ+S+ + + S+ Q+IR MSSSK+FVGG+SY TD+ LREAF+KYG
Sbjct: 1 MAFLSKVGRLFSQTSSHVTA--SSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERSRG-- 120
+VV+A++I+DR+TGRSRGF FVTF + EEAS+A+Q LDGQDL GRRIRVN+ATER G
Sbjct: 61 EVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERGSGFG 120
Query: 121 --GFGGGGGGYGG--GGYG------GGGNAGYGGGGGY---GRGGGGYG 155
GFGG GGGYG GGYG GGG GYGG Y GGGGYG
Sbjct: 121 GRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYG 166
BLAST of MS003990 vs. TAIR 10
Match:
AT3G23830.1 (glycine-rich RNA-binding protein 4 )
HSP 1 Score: 131.3 bits (329), Expect = 6.6e-31
Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAF +K+ I Q ++ + S+ ++R+M SSK+FVGGLS+GTDD SL++AFT +G
Sbjct: 1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYM-SSKLFVGGLSWGTDDSSLKQAFTSFG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS---R 120
+V EA VI DR+TGRSRGFGFV+F+ + A++AI+ +DG++L+GR+IRVN ATERS R
Sbjct: 61 EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 120
Query: 121 GGFGGGGGGYGGGGYGG 135
F GGGGGYGGGG GG
Sbjct: 121 SSF-GGGGGYGGGGGGG 135
BLAST of MS003990 vs. TAIR 10
Match:
AT3G23830.2 (glycine-rich RNA-binding protein 4 )
HSP 1 Score: 131.3 bits (329), Expect = 6.6e-31
Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAF +K+ I Q ++ + S+ ++R+M SSK+FVGGLS+GTDD SL++AFT +G
Sbjct: 1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYM-SSKLFVGGLSWGTDDSSLKQAFTSFG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATERS---R 120
+V EA VI DR+TGRSRGFGFV+F+ + A++AI+ +DG++L+GR+IRVN ATERS R
Sbjct: 61 EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 120
Query: 121 GGFGGGGGGYGGGGYGG 135
F GGGGGYGGGG GG
Sbjct: 121 SSF-GGGGGYGGGGGGG 135
BLAST of MS003990 vs. TAIR 10
Match:
AT4G13850.3 (glycine-rich RNA-binding protein 2 )
HSP 1 Score: 128.3 bits (321), Expect = 5.6e-30
Identity = 77/144 (53.47%), Postives = 104/144 (72.22%), Query Frame = 0
Query: 1 MAFLSKVGKIFSQSSTRIGSDLQPSIFQTIRFMSSSKVFVGGLSYGTDDQSLREAFTKYG 60
MAF +K+G + Q+ + G+ S+ ++R M S+K+F+GGLS+GTDD SLR+AF +G
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLM-STKLFIGGLSWGTDDASLRDAFAHFG 60
Query: 61 DVVEARVILDRDTGRSRGFGFVTFNANEEASSAIQALDGQDLDGRRIRVNFATER----- 120
DVV+A+VI+DR+TGRSRGFGFV FN A++AI +DG++L+GR IRVN A +R
Sbjct: 61 DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 120
Query: 121 ---SRGGFGGGGGGYGGGGYGGGG 137
GG+ GGGGGYGGGG GGGG
Sbjct: 121 AYGGGGGYSGGGGGYGGGGDGGGG 143
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022137596.1 | 9.8e-69 | 98.73 | glycine-rich RNA-binding protein 4, mitochondrial-like [Momordica charantia] | [more] |
XP_022994220.1 | 9.5e-48 | 82.12 | glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita maxima] | [more] |
XP_022954706.1 | 6.2e-47 | 82.78 | glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita moschata] >KAG... | [more] |
KAG6572904.1 | 8.1e-47 | 82.12 | Glycine-rich RNA-binding protein 5, mitochondrial, partial [Cucurbita argyrosper... | [more] |
XP_004137435.1 | 2.0e-45 | 78.26 | glycine-rich RNA-binding protein 3, mitochondrial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Q9FNR1 | 2.4e-38 | 62.20 | Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=370... | [more] |
Q9C909 | 4.3e-35 | 62.13 | Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=370... | [more] |
Q9LIS2 | 9.3e-30 | 56.20 | Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana OX=370... | [more] |
Q9SVM8 | 2.8e-26 | 55.06 | Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=370... | [more] |
Q43472 | 2.0e-24 | 60.87 | Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C734 | 4.7e-69 | 98.73 | glycine-rich RNA-binding protein 4, mitochondrial-like OS=Momordica charantia OX... | [more] |
A0A6J1K0M4 | 4.6e-48 | 82.12 | glycine-rich RNA-binding protein 4, mitochondrial-like OS=Cucurbita maxima OX=36... | [more] |
A0A6J1GRM7 | 3.0e-47 | 82.78 | glycine-rich RNA-binding protein 4, mitochondrial-like OS=Cucurbita moschata OX=... | [more] |
A0A0A0LQL8 | 9.6e-46 | 78.26 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039190 PE=4 SV... | [more] |
A0A1S3BNP0 | 1.6e-45 | 78.48 | glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucumis melo OX=3656 G... | [more] |