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MS003987 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCCTCCAAAAGATTTGGGACGAAACCCTTGCCGGTCCGGCGCCCGATTCCGGCCTCGGACGCCTCCGCAAGTACAATTCCTTCTCTGCCTCCAGATCTCCGCCGATGTTATCCGGCGACGTGATCTCGATTCCTCGGAGTATTGACATTCCTAGCCCTACGCTCTCTCATAGTCTGAGTCAGAGTCAGAGTCAGAGTCGGAGCTTTCCTGATCCTGCATCGCCGATCAGCTCACCATCGCCGTCGACTCGTAACTATTTTCCTCTTCGTTCCGATTCTTGATTTCATTCTATTTACTGCATACTTTTTTTTAACCGGATTGGATCGTGCGTGGTGTTGCTGTTCGTGCAGCACCTGAGACGCCGCGTGGTGACGATGTCAAGAGACTTACGAAGAGAAGATCGGTCGATTTTCCTCGCCGCCGGCCGCTGGAAGGAGCTGAACCAACAACTCCTTCTGTTTATGATTGG ATGAGTTTCCTCCAAAAGATTTGGGACGAAACCCTTGCCGGTCCGGCGCCCGATTCCGGCCTCGGACGCCTCCGCAAGTACAATTCCTTCTCTGCCTCCAGATCTCCGCCGATGTTATCCGGCGACGTGATCTCGATTCCTCGGAGTATTGACATTCCTAGCCCTACGCTCTCTCATAGTCTGAGTCAGAGTCAGAGTCAGAGTCGGAGCTTTCCTGATCCTGCATCGCCGATCAGCTCACCATCGCCGTCGACTCCACCTGAGACGCCGCGTGGTGACGATGTCAAGAGACTTACGAAGAGAAGATCGGTCGATTTTCCTCGCCGCCGGCCGCTGGAAGGAGCTGAACCAACAACTCCTTCTGTTTATGATTGG ATGAGTTTCCTCCAAAAGATTTGGGACGAAACCCTTGCCGGTCCGGCGCCCGATTCCGGCCTCGGACGCCTCCGCAAGTACAATTCCTTCTCTGCCTCCAGATCTCCGCCGATGTTATCCGGCGACGTGATCTCGATTCCTCGGAGTATTGACATTCCTAGCCCTACGCTCTCTCATAGTCTGAGTCAGAGTCAGAGTCAGAGTCGGAGCTTTCCTGATCCTGCATCGCCGATCAGCTCACCATCGCCGTCGACTCCACCTGAGACGCCGCGTGGTGACGATGTCAAGAGACTTACGAAGAGAAGATCGGTCGATTTTCCTCGCCGCCGGCCGCTGGAAGGAGCTGAACCAACAACTCCTTCTGTTTATGATTGG MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTKRRSVDFPRRRPLEGAEPTTPSVYDW Homology
BLAST of MS003987 vs. NCBI nr
Match: XP_022137069.1 (dormancy-associated protein homolog 4-like [Momordica charantia]) HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61 Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of MS003987 vs. NCBI nr
Match: XP_038878401.1 (dormancy-associated protein homolog 4-like [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 1.3e-39 Identity = 97/131 (74.05%), Postives = 108/131 (82.44%), Query Frame = 0
BLAST of MS003987 vs. NCBI nr
Match: XP_022955440.1 (dormancy-associated protein homolog 4-like [Cucurbita moschata] >KAG7018232.1 Dormancy-associated protein-like 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163.3 bits (412), Expect = 1.3e-36 Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of MS003987 vs. NCBI nr
Match: XP_023527038.1 (dormancy-associated protein homolog 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.4 bits (407), Expect = 5.1e-36 Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of MS003987 vs. NCBI nr
Match: XP_022980753.1 (dormancy-associated protein homolog 4-like [Cucurbita maxima]) HSP 1 Score: 160.2 bits (404), Expect = 1.1e-35 Identity = 87/129 (67.44%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of MS003987 vs. ExPASy Swiss-Prot
Match: F4HV65 (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08 Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of MS003987 vs. ExPASy TrEMBL
Match: A0A6J1C649 (dormancy-associated protein homolog 4-like OS=Momordica charantia OX=3673 GN=LOC111008630 PE=3 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 7.6e-62 Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of MS003987 vs. ExPASy TrEMBL
Match: A0A6J1GV52 (dormancy-associated protein homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457466 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 6.5e-37 Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of MS003987 vs. ExPASy TrEMBL
Match: A0A0A0L9F5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646010 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.5e-36 Identity = 94/139 (67.63%), Postives = 103/139 (74.10%), Query Frame = 0
BLAST of MS003987 vs. ExPASy TrEMBL
Match: A0A6J1J079 (dormancy-associated protein homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111480027 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 5.5e-36 Identity = 87/129 (67.44%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of MS003987 vs. ExPASy TrEMBL
Match: A0A6J1GCS2 (dormancy-associated protein homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111452773 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 6.1e-35 Identity = 83/127 (65.35%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of MS003987 vs. TAIR 10
Match: AT1G54070.1 (Dormancy/auxin associated family protein ) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09 Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of MS003987 vs. TAIR 10
Match: AT1G28330.1 (dormancy-associated protein-like 1 ) HSP 1 Score: 47.8 bits (112), Expect = 7.6e-06 Identity = 42/133 (31.58%), Postives = 57/133 (42.86%), Query Frame = 0
BLAST of MS003987 vs. TAIR 10
Match: AT1G28330.4 (dormancy-associated protein-like 1 ) HSP 1 Score: 47.8 bits (112), Expect = 7.6e-06 Identity = 42/133 (31.58%), Postives = 57/133 (42.86%), Query Frame = 0
BLAST of MS003987 vs. TAIR 10
Match: AT1G56220.2 (Dormancy/auxin associated family protein ) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05 Identity = 37/112 (33.04%), Postives = 52/112 (46.43%), Query Frame = 0
BLAST of MS003987 vs. TAIR 10
Match: AT1G56220.3 (Dormancy/auxin associated family protein ) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05 Identity = 33/96 (34.38%), Postives = 46/96 (47.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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