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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGATGGCTATGGTAGTCGGGGCTCAGTTTCGGACCCAAATCATCCACATCCATCCCGAGCCTCAGATTCGGTCCGAACCTCGGTTCTGTGCCCCAGTTCGTTGAAATTTTCGCACTCTTTCGATCACTTTATCTCTCTCTCTCTGAGCTCGGGGAGGCTCATATACTCGTATCTCTCTCTGATTCAAACCCTAACACTCCACAATCCGGCATTATCACAGGATCGCTTTCAAGTTTGTACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGTCTCCCGCTTTCTCTTTTAAAACCCTAATTTTTCCTTTTCCGGGGGTCATTTCTTTTGGGAAA mRNA sequence ATGGCGATGGCTATGGTAGTCGGGGCTCAGTTTCGGACCCAAATCATCCACATCCATCCCGAGCCTCAGATTCGGTCCGAACCTCGGTTCTGTGCCCCAGATCGCTTTCAAGTTTGTACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGTCTCCCGCTTTCTCTTTTAAAACCCTAATTTTTCCTTTTCCGGGGGTCATTTCTTTTGGGAAA Coding sequence (CDS) ATGGCGATGGCTATGGTAGTCGGGGCTCAGTTTCGGACCCAAATCATCCACATCCATCCCGAGCCTCAGATTCGGTCCGAACCTCGGTTCTGTGCCCCAGATCGCTTTCAAGTTTGTACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGTCTCCCGCTTTCTCTTTTAAAACCCTAATTTTTCCTTTTCCGGGGGTCATTTCTTTTGGGAAA Protein sequence MAMAMVVGAQFRTQIIHIHPEPQIRSEPRFCAPDRFQVCTQAHQISVSSLSPAFSFKTLIFPFPGVISFGK
Homology
BLAST of MS003981 vs. NCBI nr
Match: KGN64041.1 (hypothetical protein Csa_013264 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 8.2e-15 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0 Query: 1 MAMAMVVGAQFRTQIIHIHPEPQIRSEPRFCAPD----RFQVCTQAHQISVSSLSPAFSF 60 MAMAMV+GA RTQI HIHPEPQ+RS+P+FCAP F+ TQAHQISVSSL P+F F Sbjct: 1 MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60
Query: 61 KTLIF-PFPGVISFGK 72 K F PF V+SF K Sbjct: 61 KNPNFPPFLRVVSFRK 76
BLAST of MS003981 vs. NCBI nr
Match: KAG7037139.1 (hypothetical protein SDJN02_00761, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 57.0 bits (136), Expect = 7.7e-05 Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 0 Query: 3 MAMVVGAQFRTQIIHIHPEPQIRSEPRFCAP 34 MAM +GAQ RTQIIHIHP P++RSEP+ CAP Sbjct: 1 MAMAIGAQIRTQIIHIHPRPEVRSEPQLCAP 31
BLAST of MS003981 vs. ExPASy TrEMBL
Match: A0A0A0LVL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039080 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 4.0e-15 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0 Query: 1 MAMAMVVGAQFRTQIIHIHPEPQIRSEPRFCAPD----RFQVCTQAHQISVSSLSPAFSF 60 MAMAMV+GA RTQI HIHPEPQ+RS+P+FCAP F+ TQAHQISVSSL P+F F Sbjct: 1 MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60
Query: 61 KTLIF-PFPGVISFGK 72 K F PF V+SF K Sbjct: 61 KNPNFPPFLRVVSFRK 76
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN64041.1 | 8.2e-15 | 64.47 | hypothetical protein Csa_013264 [Cucumis sativus] | [more] |
KAG7037139.1 | 7.7e-05 | 74.19 | hypothetical protein SDJN02_00761, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LVL3 | 4.0e-15 | 64.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039080 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS003981.1 | MS003981.1 | mRNA |
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