MS003965 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCTGTTTAGGAAATTATTCTACCGGAAGCCTCCAGATCGGCTGCTCGAGATCGCTGAGAGGGTGTATGGTATGCTTCTT ATGGCGCTGTTTAGGAAATTATTCTACCGGAAGCCTCCAGATCGGCTGCTCGAGATCGCTGAGAGGGTGTATGGTATGCTTCTT ATGGCGCTGTTTAGGAAATTATTCTACCGGAAGCCTCCAGATCGGCTGCTCGAGATCGCTGAGAGGGTGTATGGTATGCTTCTT MALFRKLFYRKPPDRLLEIAERVYGMLL Homology
BLAST of MS003965 vs. NCBI nr
Match: TYJ98911.1 (formin-like protein 20 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-05 Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0
BLAST of MS003965 vs. NCBI nr
Match: TYH39975.1 (hypothetical protein ES332_D12G214500v1 [Gossypium tomentosum]) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04 Identity = 24/28 (85.71%), Postives = 27/28 (96.43%), Query Frame = 0
BLAST of MS003965 vs. NCBI nr
Match: KAG6410264.1 (hypothetical protein SASPL_128317 [Salvia splendens]) HSP 1 Score: 53.9 bits (128), Expect = 2.6e-04 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 0
BLAST of MS003965 vs. NCBI nr
Match: RRT40892.1 (hypothetical protein B296_00021260 [Ensete ventricosum]) HSP 1 Score: 53.1 bits (126), Expect = 4.4e-04 Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of MS003965 vs. NCBI nr
Match: KAG2407757.1 (Formin-like protein [Vigna angularis]) HSP 1 Score: 53.1 bits (126), Expect = 4.4e-04 Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = 0
BLAST of MS003965 vs. ExPASy Swiss-Prot
Match: Q7XWS7 (Formin-like protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=FH12 PE=3 SV=3) HSP 1 Score: 47.4 bits (111), Expect = 3.1e-05 Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 0
BLAST of MS003965 vs. ExPASy Swiss-Prot
Match: Q9FLQ7 (Formin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=FH20 PE=2 SV=3) HSP 1 Score: 47.0 bits (110), Expect = 4.1e-05 Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 0
BLAST of MS003965 vs. ExPASy Swiss-Prot
Match: Q6ZCX3 (Formin-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=FH6 PE=2 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 7.0e-05 Identity = 21/24 (87.50%), Postives = 21/24 (87.50%), Query Frame = 0
BLAST of MS003965 vs. ExPASy Swiss-Prot
Match: Q9LVN1 (Formin-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=FH13 PE=2 SV=3) HSP 1 Score: 45.1 bits (105), Expect = 1.6e-04 Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MS003965 vs. ExPASy Swiss-Prot
Match: Q9SK28 (Formin-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=FH18 PE=2 SV=3) HSP 1 Score: 43.1 bits (100), Expect = 5.9e-04 Identity = 19/24 (79.17%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MS003965 vs. ExPASy TrEMBL
Match: A0A5D3BJL2 (Formin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001080 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.6e-06 Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0
BLAST of MS003965 vs. ExPASy TrEMBL
Match: A0A5D2IC39 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D12G214500v1 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.5e-05 Identity = 24/28 (85.71%), Postives = 27/28 (96.43%), Query Frame = 0
BLAST of MS003965 vs. ExPASy TrEMBL
Match: A0A426XN88 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00021260 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-04 Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of MS003965 vs. ExPASy TrEMBL
Match: A0A1S3BCR7 (Formin-like protein OS=Cucumis melo OX=3656 GN=LOC103488255 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.7e-04 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of MS003965 vs. ExPASy TrEMBL
Match: A0A0A0LQJ6 (Formin-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G038900 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.7e-04 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of MS003965 vs. TAIR 10
Match: AT2G25052.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 5.9e-07 Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 0
BLAST of MS003965 vs. TAIR 10
Match: AT5G07740.1 (actin binding ) HSP 1 Score: 47.0 bits (110), Expect = 2.9e-06 Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 0
BLAST of MS003965 vs. TAIR 10
Match: AT5G58160.1 (actin binding ) HSP 1 Score: 45.1 bits (105), Expect = 1.1e-05 Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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