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MS003956 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGGCGCGGATTGTTTGATTTGGAGAGGCATTTTGCATTCTATGGGGCTTATCACAGCAACCCAACAAATGTTTTCATTCATATCCTGTTCGTGTGGCCAATTTTCTTCACTGCCCTTATGCTCTTCTACTTCACCCCCTCCTTCTACTCTTTACCTAAATGCCCTTGTGGGTTCAATCATGGCCTCGTTTTGAATTTTGGGTTTTTGTTGGCTTTGGTTTATGGCGTTTTCTACATACTTTTGGATAAGAGATCTGGGTCTTTGGCCGCTTTCATGTGTTTTCTCTGCTGGGTTGGAGGTAGCGTTTTTGCTTATAAACTCGGCTTTGATCGAACTTGGAAGGTAAACGCCCTTTTTTTCCTCGTTTGACTATTTAATACTTCACAGATCTTTAAAAAACCATATTTAGGTTGTCTTGTTTCTGCTCCAATTCTGATATTTGAACCATTCATGAAACTCAGTTCCCTTATACTTTTATTTAATTTTTGATGGGGCCGGAATTTATGGTTTTGATTTGATGTTGCCTAGGAACAAGGTTGGGTCGGTAATGGTGTGACTAAGCTTCTCTAGAATTTAATTCTCCTGTAAAATAGTACAGGTTTCATTTTCGTAGAGAAAAGCTCATTATAGCATAAAAGTAACTAAACTTCGATCCTTTCCAAAATAAGAAAGAGGAAAGAAATTTGTTCCAGCTTCTCCTGACTATATGGTTGTTGTAGAATTTACTGCTCATATTTATTATTTGGTATCTTATTTCCAAACAGAAAAGGCTGATTATGCCCGGCCAATATTGAAAAATAATTTAGTATTCGATCCTTCGCTGAAATAAGAACGAAGAAAAGAAAAACCTTTGGCTCCGTGTTGAGCTCTTCTTCTTCTTCTAGTCTTCTTCTTTATAAGTAGTTGTGCTTCAGCTTCAACGAAGTGAACATGAATTTGAATGCAGATCTTAGCTCTTATTTGCGCTTTCTCTTCATCTTCAAGTTTGTAAAAGATTGTGCTGGCAAAGCATTTGGTCTCAATGACCATAAAGTGAACTCTGAAGTCTGAATAGATATCTCTGCTCCTGTTTGGGCATGGTCTGTTTTTGTGATTAAACATTGATCAGTTACCTTCTGACAATTTTCAATGTTCTAGAAATGACTGAGTTGACAGCACTATCTATTTGTTTATTAAACTCGTGTAGCTTCTGTCTTTATTATCAAACACAACCTTCTCCCTATGTTGTTTGATGGTGATTTTATGGCTTCAGAGTTAAAGTAATGCCTTACATGCAGCAGTTAGGTTTAATTACACTTGAATTTGGCAGAAGTCTTTGTTTGACTGGTTTATATTACAAAGCTCTTCTTAGAACACTGGTTAAGTTGCTTCCTCCCTATGATCCGATGTGTCCTTTTGTTGTCCTTGTCTTCTTGGCTACTCTGTCTTTATAGCATGTTAATATTGTTGTACTAGGCTAAACTTGATGAACATCAATTTTGAAGAAATTTTAGGAAGTACTTTTTCGAGGATCATCTCAAAGTCTTGTGACTGAAATTTGGGATGAGAAAGCTTGCAGCTTTTGAATATTGGACCAGCTGGGAGATTCCTTTTAGATAACTTAAGGCCACCCTTTGAAAAAAAAAAGAAAAAACCTGTATACTATACGATTGACACTCTTTCTTTTTCTTTTTTGACATCGTACTAACTCGACAGTACTCCTCGGCATACATCTGTAATCCTATGTCAAACTTTAAGGATCTAAAAGACATGTCCAATTCCTTGCAGAATTTATACTGTCTCTAGCATTAAAGCTTAAACTGTTTATTTTGTCATTTGGTGTATCAGGTAGTGCTGGCTGCACAGTTGTTCTGTTGGACAAGCCAGTTTCTTGGTCATGGATTGTTCGAGGTAACTGATAAACTAGTTAAACTTGATAAACATTAACATGTTTTCTTATTGTTTCAATCCCTCAATTAAGCTGGGTTTTGGTTTCGTTTGACAGAAACGAGCGCCTGCTCTCATCGACAACCTTGCTCAAGCTTTTCTAATGGCTCCATTCTTCGTTTTGTTGGAGGTAATCTTTGCTCAAACCCCTTCTTATACCAAGATCCTCTTTTGTTCATCAACAAAAGTAGAGCATTTGAAAATGTGTCTAATTTGAGAATTCTCTGCAGATTCTTCAAGGTTTATTCAAATACGAACCATATAAAGGATTTCACGCAAGCGTAAAAGCGAAGATAGAAGCCGAGAAGAAAGCGTGGCAAGACAAGAAAGAAAAAAAAAGCTCT ATGGGTAGGCGCGGATTGTTTGATTTGGAGAGGCATTTTGCATTCTATGGGGCTTATCACAGCAACCCAACAAATGTTTTCATTCATATCCTGTTCGTGTGGCCAATTTTCTTCACTGCCCTTATGCTCTTCTACTTCACCCCCTCCTTCTACTCTTTACCTAAATGCCCTTGTGGGTTCAATCATGGCCTCGTTTTGAATTTTGGGTTTTTGTTGGCTTTGGTTTATGGCGTTTTCTACATACTTTTGGATAAGAGATCTGGGTCTTTGGCCGCTTTCATGTGTTTTCTCTGCTGGGTTGGAGGTAGCGTTTTTGCTTATAAACTCGGCTTTGATCGAACTTGGAAGGTAGTGCTGGCTGCACAGTTGTTCTGTTGGACAAGCCAGTTTCTTGGTCATGGATTGTTCGAGAAACGAGCGCCTGCTCTCATCGACAACCTTGCTCAAGCTTTTCTAATGGCTCCATTCTTCGTTTTGTTGGAGATTCTTCAAGGTTTATTCAAATACGAACCATATAAAGGATTTCACGCAAGCGTAAAAGCGAAGATAGAAGCCGAGAAGAAAGCGTGGCAAGACAAGAAAGAAAAAAAAAGCTCT ATGGGTAGGCGCGGATTGTTTGATTTGGAGAGGCATTTTGCATTCTATGGGGCTTATCACAGCAACCCAACAAATGTTTTCATTCATATCCTGTTCGTGTGGCCAATTTTCTTCACTGCCCTTATGCTCTTCTACTTCACCCCCTCCTTCTACTCTTTACCTAAATGCCCTTGTGGGTTCAATCATGGCCTCGTTTTGAATTTTGGGTTTTTGTTGGCTTTGGTTTATGGCGTTTTCTACATACTTTTGGATAAGAGATCTGGGTCTTTGGCCGCTTTCATGTGTTTTCTCTGCTGGGTTGGAGGTAGCGTTTTTGCTTATAAACTCGGCTTTGATCGAACTTGGAAGGTAGTGCTGGCTGCACAGTTGTTCTGTTGGACAAGCCAGTTTCTTGGTCATGGATTGTTCGAGAAACGAGCGCCTGCTCTCATCGACAACCTTGCTCAAGCTTTTCTAATGGCTCCATTCTTCGTTTTGTTGGAGATTCTTCAAGGTTTATTCAAATACGAACCATATAAAGGATTTCACGCAAGCGTAAAAGCGAAGATAGAAGCCGAGAAGAAAGCGTGGCAAGACAAGAAAGAAAAAAAAAGCTCT MGRRGLFDLERHFAFYGAYHSNPTNVFIHILFVWPIFFTALMLFYFTPSFYSLPKCPCGFNHGLVLNFGFLLALVYGVFYILLDKRSGSLAAFMCFLCWVGGSVFAYKLGFDRTWKVVLAAQLFCWTSQFLGHGLFEKRAPALIDNLAQAFLMAPFFVLLEILQGLFKYEPYKGFHASVKAKIEAEKKAWQDKKEKKSS Homology
BLAST of MS003956 vs. NCBI nr
Match: XP_022137685.1 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like [Momordica charantia]) HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108 Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of MS003956 vs. NCBI nr
Match: XP_023519470.1 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 370.9 bits (951), Expect = 6.7e-99 Identity = 179/199 (89.95%), Postives = 188/199 (94.47%), Query Frame = 0
BLAST of MS003956 vs. NCBI nr
Match: XP_022998807.1 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like [Cucurbita maxima]) HSP 1 Score: 367.5 bits (942), Expect = 7.4e-98 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of MS003956 vs. NCBI nr
Match: XP_022949543.1 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like [Cucurbita moschata] >KAG6607458.1 hypothetical protein SDJN03_00800, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037114.1 SPAC16E8.02 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of MS003956 vs. NCBI nr
Match: XP_023525923.1 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of MS003956 vs. ExPASy Swiss-Prot
Match: O13737 (2-hydroxy-palmitic acid dioxygenase mpo1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mpo1 PE=3 SV=2) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18 Identity = 67/189 (35.45%), Postives = 96/189 (50.79%), Query Frame = 0
BLAST of MS003956 vs. ExPASy Swiss-Prot
Match: P25338 (2-hydroxy-palmitic acid dioxygenase MPO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPO1 PE=1 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 3.0e-17 Identity = 62/180 (34.44%), Postives = 94/180 (52.22%), Query Frame = 0
BLAST of MS003956 vs. ExPASy TrEMBL
Match: A0A6J1C7C0 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like OS=Momordica charantia OX=3673 GN=LOC111009061 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 5.9e-109 Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of MS003956 vs. ExPASy TrEMBL
Match: A0A6J1K901 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like OS=Cucurbita maxima OX=3661 GN=LOC111493360 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of MS003956 vs. ExPASy TrEMBL
Match: A0A6J1EE32 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like OS=Cucurbita moschata OX=3662 GN=LOC111431702 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97 Identity = 176/199 (88.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of MS003956 vs. ExPASy TrEMBL
Match: A0A6J1GCD3 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like OS=Cucurbita moschata OX=3662 GN=LOC111452859 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of MS003956 vs. ExPASy TrEMBL
Match: A0A6J1KEF1 (uncharacterized endoplasmic reticulum membrane protein YGL010W-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495075 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.4e-96 Identity = 173/198 (87.37%), Postives = 184/198 (92.93%), Query Frame = 0
BLAST of MS003956 vs. TAIR 10
Match: AT1G18720.1 (Protein of unknown function (DUF962) ) HSP 1 Score: 236.1 bits (601), Expect = 2.4e-62 Identity = 122/201 (60.70%), Postives = 148/201 (73.63%), Query Frame = 0
BLAST of MS003956 vs. TAIR 10
Match: AT1G74440.1 (Protein of unknown function (DUF962) ) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59 Identity = 118/201 (58.71%), Postives = 139/201 (69.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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