![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS003951 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTATATCAAACAAGAATCATTGGACGTCCTTTGCTCAATCTTGTGAGATTGAAAGGTTTTCCTATTCTGCGGCAACTACAGTTGGAAGAGCGCTTACTTCGAAACACATCAGATAATTGGTGTATCATGAATGATGGAACAGATAATCCAACTGTTGTGATGGGCGTTTCAGGGTACATACCATGCATAGTAGTTCTACTTTGAATTTTGCATGTGTCTCATGTTACTATTTATTGAAAGATTTTATTCTTCTTTTTTTATGGCGTGGGTAATTATATGGTGAATATTGAAACTTATGCGTCACAGTTTGATGATACATATATGTATATTCAGCTAGGTCCTCTGGGTGGTATACAAATACTTATATTTGTAGAATTTGAACCATTAAATCATCTATTAAAGTAAAACTATCTTTATAAAATAATAGAATCTATCACTACAAAGATAAAAGTTGGAATGAGGTTTACAATTTGACTAAGTTTCATGGTTCATTTTGGTGTTCCCTCTCTAAGTCATTTAGTCATTACACCTCCTTTATAATCCACCCAAGTTGGCCAACATTTTGTAAATTTATTTTGGAGGTGCATGGTTAAAATTTTGTTGTAACCTTTCACCAAATCAATAAAATGTTTGTTTCTGTACACAAAAGCTGCTTTTAAGAACTGTTTTTAGATGTTGAAGAGTTGCTTCAATTCCTTGAACTGGCTGTATCGATCAGTTATAGAGAAACTAATTGGAAATGTAGTATTTAATCTACTAAATAATAGAATCATCTCTTGATATGGTTTAGGATCTACTATATGCTAGTAATAAGACTTGACTATCAATTTGGTTTTGTGTTTAGTCTTGTAGTGGGAAACTCTCAATTTATAATTACCATGTTCTAAATGTTTTAAGATCTAACCTTATCCATGAGTTTCATTATAGTTTTTACCTATTCTTATATGAAACTGTCAAATGTAGAGACCTGCTAGCAGTCAAAATTCTGGGTCATCTGGTCTCTTCTATTTGACTTGTACTTTAGTTATTTCATTCTGAAGATTATTGAATTCTGCATAGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGCTAGGAGATCAAATTCCAGTCATCAGAAGGTTTTCAGGGGGTGGAACTGTTATCGTTGATCATGACACAATATTTGTCACCTTCATATGTAATAAAGATGCCGTTGCCGGACTAAAACCATTTCCTCAACCTATCATGTCCTGGAGTAGTCTAGTATATGATAAAGTATTCCAAGGAACTAATTTTTATCTTCGGGAAAATGGTAGGTAGATTGAACTCTTTAGAATGAACACCATTTCAACTTATTCATATATCTCTGCTTGCATTCAATTATGTATCAGATTAAAAGCTTGTACATTGACTTTTTGTCTTTCCTGGATTAAGATTATGTCTTCGGTAACCACAAGTTTGGTGGAAATGCTCAGTCCATCACTAAAAGCCGGTGGATCCACCATACTTCTTTTCTGTGGGACTATGAGGTTGGGAATATGGCATATCTGAAACATCCTAAACGGGCTCCTGATTATCGTGAGGTATATCGTACTCTTCCTTGCATTTTTTTTTTTCTTTTTGCCCCAAACTGATTTCATGTCCCATCTGCTTCTTTTTCCAACGCCGAGCCTTGCTACTGCAATTGAATATCCAATTATATTTAATGGCCCTGAGACAAATAAATATAGTAAGAGCTTGACAATTGCTATATCTCTATCTCGTAAGATCATCTTGAGGCTCCAATTGGGAATATCCATGTGTTGGTTTTTGAGTTAAAAACATTTTGGACCCATTCCAAAAAGTTGAGGTTGTATATTTGTCCAACCAAAATGAATCCTTAGACTTATGTGTTTTATAATTCTTATTCAGGCAAGGAACCATTTGGATTTTTTATGCCGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGATAAAACAATAGAAGCAATTGAAACTCAATTTGCTACAAGTATAAAGCAATTTGAAGAATGTGAACATTCTTCGACTGGAAACTATAGTCCTACAACAAGGATGCTGACACAGCAAGAATTGGAAACAGCTGCCGGTTGCGGATCGCAAATACATAAGCTTGATAAATTCTTGGACGTAGCAATT ATGATGGTATATCAAACAAGAATCATTGGACGTCCTTTGCTCAATCTTGTGAGATTGAAAGGTTTTCCTATTCTGCGGCAACTACAGTTGGAAGAGCGCTTACTTCGAAACACATCAGATAATTGGTGTATCATGAATGATGGAACAGATAATCCAACTGTTGTGATGGGCGTTTCAGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGCTAGGAGATCAAATTCCAGTCATCAGAAGGTTTTCAGGGGGTGGAACTGTTATCGTTGATCATGACACAATATTTGTCACCTTCATATGTAATAAAGATGCCGTTGCCGGACTAAAACCATTTCCTCAACCTATCATGTCCTGGAGTAGTCTAGTATATGATAAAGTATTCCAAGGAACTAATTTTTATCTTCGGGAAAATGATTATGTCTTCGGTAACCACAAGTTTGGTGGAAATGCTCAGTCCATCACTAAAAGCCGGTGGATCCACCATACTTCTTTTCTGTGGGACTATGAGGTTGGGAATATGGCATATCTGAAACATCCTAAACGGGCTCCTGATTATCGTGAGGCAAGGAACCATTTGGATTTTTTATGCCGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGATAAAACAATAGAAGCAATTGAAACTCAATTTGCTACAAGTATAAAGCAATTTGAAGAATGTGAACATTCTTCGACTGGAAACTATAGTCCTACAACAAGGATGCTGACACAGCAAGAATTGGAAACAGCTGCCGGTTGCGGATCGCAAATACATAAGCTTGATAAATTCTTGGACGTAGCAATT ATGATGGTATATCAAACAAGAATCATTGGACGTCCTTTGCTCAATCTTGTGAGATTGAAAGGTTTTCCTATTCTGCGGCAACTACAGTTGGAAGAGCGCTTACTTCGAAACACATCAGATAATTGGTGTATCATGAATGATGGAACAGATAATCCAACTGTTGTGATGGGCGTTTCAGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGCTAGGAGATCAAATTCCAGTCATCAGAAGGTTTTCAGGGGGTGGAACTGTTATCGTTGATCATGACACAATATTTGTCACCTTCATATGTAATAAAGATGCCGTTGCCGGACTAAAACCATTTCCTCAACCTATCATGTCCTGGAGTAGTCTAGTATATGATAAAGTATTCCAAGGAACTAATTTTTATCTTCGGGAAAATGATTATGTCTTCGGTAACCACAAGTTTGGTGGAAATGCTCAGTCCATCACTAAAAGCCGGTGGATCCACCATACTTCTTTTCTGTGGGACTATGAGGTTGGGAATATGGCATATCTGAAACATCCTAAACGGGCTCCTGATTATCGTGAGGCAAGGAACCATTTGGATTTTTTATGCCGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGATAAAACAATAGAAGCAATTGAAACTCAATTTGCTACAAGTATAAAGCAATTTGAAGAATGTGAACATTCTTCGACTGGAAACTATAGTCCTACAACAAGGATGCTGACACAGCAAGAATTGGAAACAGCTGCCGGTTGCGGATCGCAAATACATAAGCTTGATAAATTCTTGGACGTAGCAATT MMVYQTRIIGRPLLNLVRLKGFPILRQLQLEERLLRNTSDNWCIMNDGTDNPTVVMGVSGKPDELLDIKSVLGDQIPVIRRFSGGGTVIVDHDTIFVTFICNKDAVAGLKPFPQPIMSWSSLVYDKVFQGTNFYLRENDYVFGNHKFGGNAQSITKSRWIHHTSFLWDYEVGNMAYLKHPKRAPDYREARNHLDFLCRLKDYMPRQVFIDKTIEAIETQFATSIKQFEECEHSSTGNYSPTTRMLTQQELETAAGCGSQIHKLDKFLDVAI Homology
BLAST of MS003951 vs. NCBI nr
Match: XP_022137462.1 (uncharacterized protein LOC111008903 isoform X1 [Momordica charantia]) HSP 1 Score: 562.4 bits (1448), Expect = 2.1e-156 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of MS003951 vs. NCBI nr
Match: XP_022137466.1 (uncharacterized protein LOC111008903 isoform X3 [Momordica charantia] >XP_022137467.1 uncharacterized protein LOC111008903 isoform X3 [Momordica charantia]) HSP 1 Score: 562.4 bits (1448), Expect = 2.1e-156 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of MS003951 vs. NCBI nr
Match: XP_022137463.1 (uncharacterized protein LOC111008903 isoform X2 [Momordica charantia] >XP_022137464.1 uncharacterized protein LOC111008903 isoform X2 [Momordica charantia] >XP_022137465.1 uncharacterized protein LOC111008903 isoform X2 [Momordica charantia]) HSP 1 Score: 562.4 bits (1448), Expect = 2.1e-156 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of MS003951 vs. NCBI nr
Match: KAA0036090.1 (lipoate-protein ligase LplJ [Cucumis melo var. makuwa] >TYJ98898.1 lipoate-protein ligase LplJ [Cucumis melo var. makuwa]) HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135 Identity = 232/271 (85.61%), Postives = 255/271 (94.10%), Query Frame = 0
BLAST of MS003951 vs. NCBI nr
Match: XP_008443042.1 (PREDICTED: lipoate-protein ligase LplJ [Cucumis melo] >XP_008443165.1 PREDICTED: lipoate-protein ligase LplJ [Cucumis melo]) HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135 Identity = 232/271 (85.61%), Postives = 255/271 (94.10%), Query Frame = 0
BLAST of MS003951 vs. ExPASy Swiss-Prot
Match: P47512 (Probable lipoate-protein ligase A OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=lplA PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06 Identity = 42/157 (26.75%), Postives = 69/157 (43.95%), Query Frame = 0
BLAST of MS003951 vs. ExPASy Swiss-Prot
Match: O13629 (Putative lipoate-protein ligase A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=aim22 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.9e-06 Identity = 40/155 (25.81%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of MS003951 vs. ExPASy Swiss-Prot
Match: O07608 (Lipoate-protein ligase LplJ OS=Bacillus subtilis (strain 168) OX=224308 GN=lplJ PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06 Identity = 40/150 (26.67%), Postives = 68/150 (45.33%), Query Frame = 0
BLAST of MS003951 vs. ExPASy Swiss-Prot
Match: A0A0H3JR16 (Lipoate--protein ligase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV1028 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04 Identity = 37/142 (26.06%), Postives = 62/142 (43.66%), Query Frame = 0
BLAST of MS003951 vs. ExPASy Swiss-Prot
Match: A6ZPT1 (Putative lipoate-protein ligase A OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=AIM22 PE=3 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04 Identity = 44/185 (23.78%), Postives = 79/185 (42.70%), Query Frame = 0
BLAST of MS003951 vs. ExPASy TrEMBL
Match: A0A6J1C6Q5 (uncharacterized protein LOC111008903 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008903 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.0e-156 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of MS003951 vs. ExPASy TrEMBL
Match: A0A6J1C8C0 (uncharacterized protein LOC111008903 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008903 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.0e-156 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of MS003951 vs. ExPASy TrEMBL
Match: A0A6J1C8B5 (uncharacterized protein LOC111008903 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008903 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.0e-156 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of MS003951 vs. ExPASy TrEMBL
Match: A0A1S3B7D4 (lipoate-protein ligase LplJ OS=Cucumis melo OX=3656 GN=LOC103486730 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 5.9e-136 Identity = 232/271 (85.61%), Postives = 255/271 (94.10%), Query Frame = 0
BLAST of MS003951 vs. ExPASy TrEMBL
Match: A0A5A7SYE8 (Lipoate-protein ligase LplJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00950 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 5.9e-136 Identity = 232/271 (85.61%), Postives = 255/271 (94.10%), Query Frame = 0
BLAST of MS003951 vs. TAIR 10
Match: AT3G29010.1 (Biotin/lipoate A/B protein ligase family ) HSP 1 Score: 323.9 bits (829), Expect = 1.2e-88 Identity = 150/254 (59.06%), Postives = 195/254 (76.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|