MS003949 (gene) Bitter gourd (TR) v1

Overview


Name	MS003949
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cyclic dof factor 3-like
Location	scaffold1597: 110006 .. 111704 (+)
RNA-Seq Expression	MS003949
Synteny	MS003949

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGATTCTAAGGACCCTGCCATCAAGCTTTTTGGCCGGAAAATTCCCCTCTCCGACGACGGCGAATCTCCGGCGATCCATCCCCAACAGTCGCCTTCTGACAAAGATGAATCCCAGCCCCCAAAGGTACAGACAGAGCAGGCCATAGTTTCTATGGAAGTTGTGTTATACTTCAAACCAACTGCTACCCATTTCATCTAATGGTCAACAAAATTTTCTGGGTCGTTTTTACTTTTTCACTTCTTTCCATGACTTCAGTTTTCTGCTGCTTCTGAAAAGAGAAAAAAAAAAAAAAAAAGCTTTTTTCTTTGTTTGATTACGAGTCTTTCCTGTCTTGTTTCTTCTTCTCCAATTTGATTTGGTTCTACTGTTAGGGAGAAACTGAACATATGGGGTTATCGCGGATTCTCCTTTCTCTGCTTCTCTTTTCCAAATTACTAATTTACTCGAAATGGAAAAAAGTTGGTTTCTCATATATTTACCTAGGCTCTACCTCAATTGGGCTTTTAACGAATAGTAGTCATAATTCAACAATGAAATAATTTCCACCAACTTTCTTTATTTTTCTGGATTTCAGGACGCGACAGTAGATGATCCGAAAACGCCGTCCATAGACGAAGAAACTGAGAAGCCGATTAATGGAAAAACAGATAGCGAGACACCGAATTCAGAGAAAACCCTAAAGAAGCCGGATAAATTGCTCCCATGCCCTCGCTGCAAGAGCATGGAGACCAAATTCTGTTACTACAACAATTACAATGTCAACCAACCCCGCCATTTTTGCAAAGCCTGTCAAAGATACTGGACTGCCGGCGGCACCATGAGGAACGTGCCGGTCGGAGCCGGTCGCCGGAAGAGCAAGAGCTCTGCTTCCTACTACCGCCAAATCACAATTTCCGAGGCTCTCGAAGCCGCTCGACTTGAGGCTCCAAATGGAACCCACAAACCAAAATTTATCAGCAATAATAATGGCAGAGTCCTCAGTTTCAATTTGGATGCACCAAATTCAGACCCCGTGGTGGCCTCTGTTTTGAATCTCTCCGAAAACAGAGTATTGAGTAATGGGTTGAAAAAATTTGAGGACAAAGGATCCGACGGCTGTGAAAAAATCTCGAGCGTGTGTTCTATGGGAGTTCAAAGTTCATCAGAGGTGGGATTAGAAGGTAGACAACGAACCCAAGAACCTCCTATCAATGGCTTCCCTTCTCATGTTTCATGTCTTCCATGGCCATTCGTGTGGAATTCCGCTGTTCCTCCTCCAGCCTTTTGCCCTCAAGGAGGATTTCCCTTGCCTTTTTATCCAGCAGCTGCCTGGAACTGCGGTCCTGGGCCATGGAACACACCATGGTTTTCTCCACAAGCTAATTCCTCTGCAGAAAAACCTCTCTGTTCTGACTCAAAATCTTCTCCAAAATTAGGAAAGCATCTCAGAGAAGAAGAGGCCGTTAAGCATAGAAATGGAAGTGTTTTGACCCCAAAGACTTTAAGGATTGACGACCCAAGTGAGGCAGCAAAAAGCTCCATATGGGCAACTCTTGGAATAAAGAACGAATCAGCAATCACTGGGGGAAAGAATCTGTTCAAAACCTTTCAACCCAAGGGCCATGAGAAGGTTCATCATGTAGCTGAAGCCTCCTCAGTTTTGCAGGCAAACCCTGCAGCCTTGTCAAGATCGCTCGTCTTTCACGAGAGCTCT

mRNA sequence

ATGTTGGATTCTAAGGACCCTGCCATCAAGCTTTTTGGCCGGAAAATTCCCCTCTCCGACGACGGCGAATCTCCGGCGATCCATCCCCAACAGTCGCCTTCTGACAAAGATGAATCCCAGCCCCCAAAGGTACAGACAGAGCAGGCCATAGTTTCTATGGAAGTTGACGCGACAGTAGATGATCCGAAAACGCCGTCCATAGACGAAGAAACTGAGAAGCCGATTAATGGAAAAACAGATAGCGAGACACCGAATTCAGAGAAAACCCTAAAGAAGCCGGATAAATTGCTCCCATGCCCTCGCTGCAAGAGCATGGAGACCAAATTCTGTTACTACAACAATTACAATGTCAACCAACCCCGCCATTTTTGCAAAGCCTGTCAAAGATACTGGACTGCCGGCGGCACCATGAGGAACGTGCCGGTCGGAGCCGGTCGCCGGAAGAGCAAGAGCTCTGCTTCCTACTACCGCCAAATCACAATTTCCGAGGCTCTCGAAGCCGCTCGACTTGAGGCTCCAAATGGAACCCACAAACCAAAATTTATCAGCAATAATAATGGCAGAGTCCTCAGTTTCAATTTGGATGCACCAAATTCAGACCCCGTGGTGGCCTCTGTTTTGAATCTCTCCGAAAACAGAGTATTGAGTAATGGGTTGAAAAAATTTGAGGACAAAGGATCCGACGGCTGTGAAAAAATCTCGAGCGTGTGTTCTATGGGAGTTCAAAGTTCATCAGAGGTGGGATTAGAAGGTAGACAACGAACCCAAGAACCTCCTATCAATGGCTTCCCTTCTCATGTTTCATGTCTTCCATGGCCATTCGTGTGGAATTCCGCTGTTCCTCCTCCAGCCTTTTGCCCTCAAGGAGGATTTCCCTTGCCTTTTTATCCAGCAGCTGCCTGGAACTGCGGTCCTGGGCCATGGAACACACCATGGTTTTCTCCACAAGCTAATTCCTCTGCAGAAAAACCTCTCTGTTCTGACTCAAAATCTTCTCCAAAATTAGGAAAGCATCTCAGAGAAGAAGAGGCCGTTAAGCATAGAAATGGAAGTGTTTTGACCCCAAAGACTTTAAGGATTGACGACCCAAGTGAGGCAGCAAAAAGCTCCATATGGGCAACTCTTGGAATAAAGAACGAATCAGCAATCACTGGGGGAAAGAATCTGTTCAAAACCTTTCAACCCAAGGGCCATGAGAAGGTTCATCATGTAGCTGAAGCCTCCTCAGTTTTGCAGGCAAACCCTGCAGCCTTGTCAAGATCGCTCGTCTTTCACGAGAGCTCT

Coding sequence (CDS)

ATGTTGGATTCTAAGGACCCTGCCATCAAGCTTTTTGGCCGGAAAATTCCCCTCTCCGACGACGGCGAATCTCCGGCGATCCATCCCCAACAGTCGCCTTCTGACAAAGATGAATCCCAGCCCCCAAAGGTACAGACAGAGCAGGCCATAGTTTCTATGGAAGTTGACGCGACAGTAGATGATCCGAAAACGCCGTCCATAGACGAAGAAACTGAGAAGCCGATTAATGGAAAAACAGATAGCGAGACACCGAATTCAGAGAAAACCCTAAAGAAGCCGGATAAATTGCTCCCATGCCCTCGCTGCAAGAGCATGGAGACCAAATTCTGTTACTACAACAATTACAATGTCAACCAACCCCGCCATTTTTGCAAAGCCTGTCAAAGATACTGGACTGCCGGCGGCACCATGAGGAACGTGCCGGTCGGAGCCGGTCGCCGGAAGAGCAAGAGCTCTGCTTCCTACTACCGCCAAATCACAATTTCCGAGGCTCTCGAAGCCGCTCGACTTGAGGCTCCAAATGGAACCCACAAACCAAAATTTATCAGCAATAATAATGGCAGAGTCCTCAGTTTCAATTTGGATGCACCAAATTCAGACCCCGTGGTGGCCTCTGTTTTGAATCTCTCCGAAAACAGAGTATTGAGTAATGGGTTGAAAAAATTTGAGGACAAAGGATCCGACGGCTGTGAAAAAATCTCGAGCGTGTGTTCTATGGGAGTTCAAAGTTCATCAGAGGTGGGATTAGAAGGTAGACAACGAACCCAAGAACCTCCTATCAATGGCTTCCCTTCTCATGTTTCATGTCTTCCATGGCCATTCGTGTGGAATTCCGCTGTTCCTCCTCCAGCCTTTTGCCCTCAAGGAGGATTTCCCTTGCCTTTTTATCCAGCAGCTGCCTGGAACTGCGGTCCTGGGCCATGGAACACACCATGGTTTTCTCCACAAGCTAATTCCTCTGCAGAAAAACCTCTCTGTTCTGACTCAAAATCTTCTCCAAAATTAGGAAAGCATCTCAGAGAAGAAGAGGCCGTTAAGCATAGAAATGGAAGTGTTTTGACCCCAAAGACTTTAAGGATTGACGACCCAAGTGAGGCAGCAAAAAGCTCCATATGGGCAACTCTTGGAATAAAGAACGAATCAGCAATCACTGGGGGAAAGAATCTGTTCAAAACCTTTCAACCCAAGGGCCATGAGAAGGTTCATCATGTAGCTGAAGCCTCCTCAGTTTTGCAGGCAAACCCTGCAGCCTTGTCAAGATCGCTCGTCTTTCACGAGAGCTCT

Protein sequence

MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVDDPKTPSIDEETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAARLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNSAVPPPAFCPQGGFPLPFYPAAAWNCGPGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVHHVAEASSVLQANPAALSRSLVFHESS

Homology

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BLAST of MS003949 vs. NCBI nr
Match: XP_022137050.1 (cyclic dof factor 3-like [Momordica charantia])

HSP 1 Score: 820.8 bits (2119), Expect = 5.3e-234
Identity = 408/428 (95.33%), Postives = 410/428 (95.79%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVD 60
           MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPK            DATVD
Sbjct: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPK------------DATVD 60

Query: 61  DPKTPSIDEETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQP 120
           DPKTPSIDEETEKPINGKT+SETPNSEKTLK PDKLLPCPRCKSMETKFCYYNNYNVNQP
Sbjct: 61  DPKTPSIDEETEKPINGKTBSETPNSEKTLKXPDKLLPCPRCKSMETKFCYYNNYNVNQP 120

Query: 121 RHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAARLEAPNGTHKPK 180
           RHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALE ARLEAPNGTHKPK
Sbjct: 121 RHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEGARLEAPNGTHKPK 180

Query: 181 FISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMG 240
           FISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMG
Sbjct: 181 FISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMG 240

Query: 241 VQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNSAVPPPAFCPQGGFPLPFYPAAA 300
           VQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNS+VPPPAFC QGGFPLPFYPAAA
Sbjct: 241 VQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNSSVPPPAFCXQGGFPLPFYPAAA 300

Query: 301 WNCGPGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAVKHRNGSVLTPKTLRI 360
           WNCGPGPWNTPWFSPQAN S EKPLCSDSKSSPKLGKHLREEEAVKHRNGSVLTPKTLRI
Sbjct: 301 WNCGPGPWNTPWFSPQANXSXEKPLCSDSKSSPKLGKHLREEEAVKHRNGSVLTPKTLRI 360

Query: 361 DDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVHHVAEASSVLQANPAALSR 420
           DDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVH VAEASSVLQANPAALSR
Sbjct: 361 DDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVHXVAEASSVLQANPAALSR 416

Query: 421 SLVFHESS 429
           SLVFHESS
Sbjct: 421 SLVFHESS 416

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BLAST of MS003949 vs. NCBI nr
Match: XP_004137585.1 (cyclic dof factor 3 [Cucumis sativus] >KGN64006.1 hypothetical protein Csa_013508 [Cucumis sativus])

HSP 1 Score: 592.4 bits (1526), Expect = 3.1e-165
Identity = 328/451 (72.73%), Postives = 359/451 (79.60%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAI-----HPQQSPSDKDESQPPKVQTEQAIVSMEV 60
           MLDSKDP IKLFGR+IPLSDD E PA+     H + +  D+ E +P     +   +    
Sbjct: 1   MLDSKDPTIKLFGRQIPLSDDAEPPALLSHAEHRKDAAIDEPE-KPVDDSDDSGNIERGE 60

Query: 61  DATVDDPKTPSIDEE-TEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNN 120
           +A+V +PKTPSIDEE T  P++G+ +SE  NSEKTLKKPDKLLPCPRCKSMETKFCYYNN
Sbjct: 61  EASV-NPKTPSIDEETTTTPVDGEPESEKSNSEKTLKKPDKLLPCPRCKSMETKFCYYNN 120

Query: 121 YNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAARLEAPN 180
           YNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+SASYYR ITISEALEAAR+E+PN
Sbjct: 121 YNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALEAARIESPN 180

Query: 181 GTHKPKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSD-GCEKI 240
           GTHKPKFIS NNGRVLSFNLDAP SDPV+ SVLNL ENRVLSNG+KKFE+KG D GCEK 
Sbjct: 181 GTHKPKFIS-NNGRVLSFNLDAPTSDPVMGSVLNLGENRVLSNGVKKFEEKGVDQGCEKS 240

Query: 241 SSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPPAFCPQGG 300
           SS+ SM VQSSSE+            INGFPS +SCL   PWPFVWNS+VPPPAF P  G
Sbjct: 241 SSLSSMPVQSSSEL-----------KINGFPSQISCLSGVPWPFVWNSSVPPPAFTPP-G 300

Query: 301 FPLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE-------- 360
           FP+ F+PAAAWN G PGPWNTPWFSPQ     EK LCSD+K+S  LGKH R+        
Sbjct: 301 FPMSFFPAAAWNSGVPGPWNTPWFSPQ----PEKSLCSDTKASSTLGKHQRDHEMSKEDA 360

Query: 361 ----EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKG 420
               EE +K RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES ITGGKNLFKTFQPKG
Sbjct: 361 ISSKEEGIKKRNGHVLTPKTLRIDDPSEAAKSSIWATLGIKNES-ITGGKNLFKTFQPKG 420

Query: 421 HEKVHHVAEASSVLQANPAALSRSLVFHESS 429
           HEKV HVAE SSVLQANPAALSRSLVFHESS
Sbjct: 421 HEKV-HVAETSSVLQANPAALSRSLVFHESS 430

[Close]

BLAST of MS003949 vs. NCBI nr
Match: XP_038895608.1 (cyclic dof factor 3-like [Benincasa hispida])

HSP 1 Score: 591.3 bits (1523), Expect = 6.8e-165
Identity = 322/450 (71.56%), Postives = 356/450 (79.11%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAI-----HPQQSPSDKDESQPPKVQTEQAIVSMEV 60
           M DSKDP IKLFGR+IPLSD+GE+P I      P++  +  D  +P     +   +    
Sbjct: 1   MFDSKDPTIKLFGRQIPLSDEGEAPVILDKHAQPRKDDAVDDPEKPVDDSNDSTNLEGGE 60

Query: 61  DATVDDPKTPSIDEETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNNY 120
           +A+V +PKTPSIDEET  PING+T+SE PNSEKTLKKPDKLLPCPRCKSMETKFCYYNNY
Sbjct: 61  EASV-NPKTPSIDEETATPINGETESEKPNSEKTLKKPDKLLPCPRCKSMETKFCYYNNY 120

Query: 121 NVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAARLEAPNG 180
           NVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+SASYYR ITIS+ALEAAR+E PNG
Sbjct: 121 NVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISDALEAARIETPNG 180

Query: 181 THKPKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSD-GCEKIS 240
           TH+PKFI  NNGR+LSFN D P+SDPVV SVLNL+ENRVLSNG+KKFE++GSD GC+K S
Sbjct: 181 THEPKFI-GNNGRILSFNSDGPSSDPVVGSVLNLAENRVLSNGVKKFEERGSDQGCDKSS 240

Query: 241 SVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPPAFCPQGGF 300
           S+ SM VQSSSE+            INGFPS +SC+   PWPFVWNS+VPPPAF P  GF
Sbjct: 241 SLSSMAVQSSSEL-----------KINGFPSQISCISGVPWPFVWNSSVPPPAFGPP-GF 300

Query: 301 PLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE--------- 360
           PL F+PAAAWNCG PGPWNTPWFSPQ     EK +  DSK+S  LGKH R+         
Sbjct: 301 PLSFFPAAAWNCGVPGPWNTPWFSPQ----PEKSVGPDSKASSTLGKHQRDNEMAKEEAI 360

Query: 361 ---EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGH 420
              EE VK RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES ITGGKNLFKTFQPKGH
Sbjct: 361 SSKEEGVKQRNGHVLTPKTLRIDDPSEAAKSSIWATLGIKNES-ITGGKNLFKTFQPKGH 420

Query: 421 EKVHHVAEASSVLQANPAALSRSLVFHESS 429
           EKV  V E SSVLQANPAALSRSLVFHESS
Sbjct: 421 EKV-QVTETSSVLQANPAALSRSLVFHESS 430

[Close]

BLAST of MS003949 vs. NCBI nr
Match: XP_022998793.1 (cyclic dof factor 1-like isoform X1 [Cucurbita maxima] >XP_022998794.1 cyclic dof factor 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 590.5 bits (1521), Expect = 1.2e-164
Identity = 332/456 (72.81%), Postives = 360/456 (78.95%), Query Frame = 0


Query: 4   SKDPAIKLFGRKIPLSDDGESPAI--HPQQSPSDKDESQPPKVQT--------EQAIVSM 63
           SKDP+  LFGRKIPLSDDGE P I  H   SPSDKD + P K  T        + +  S+
Sbjct: 5   SKDPSFTLFGRKIPLSDDGEPPPIHSHAHDSPSDKD-APPGKESTVDDDEKTVDDSDDSI 64

Query: 64  EVDATVD---DPKTPSID-EETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKF 123
            VDA  +   +PKTPSID EE   PINGK +SE  NSEKTLKKPDKLLPCPRCKSMETKF
Sbjct: 65  NVDAGEEVGVNPKTPSIDEEEAANPINGKPESENSNSEKTLKKPDKLLPCPRCKSMETKF 124

Query: 124 CYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAAR 183
           CYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+S SYYR ITISEAL+AAR
Sbjct: 125 CYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSVSYYRHITISEALDAAR 184

Query: 184 LEAPNGTHKPKFISNNNGRVLSFNLDAPNSD-PVVASVLNLSENRVLSNGLKKFEDKGSD 243
           +E PNGT KPKFI  NNGRVLSFNLD+ NSD PVV SVLNL+ENRVLSNG+KKFE+KGS+
Sbjct: 185 IEPPNGTDKPKFI-GNNGRVLSFNLDSQNSDPPVVGSVLNLAENRVLSNGVKKFEEKGSE 244

Query: 244 GCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPPAF 303
            C+K S++ S  VQSSSE        TQ+  INGFPS +SCL   PWPFVWNS+VPPPAF
Sbjct: 245 VCDKSSNLSSTAVQSSSE------SHTQK--INGFPSQISCLSGVPWPFVWNSSVPPPAF 304

Query: 304 CPQGGFPLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE--- 363
           CP  GFPL F PAAAWNCG PGPWNT WFSPQA SSAEK LCSD+K+S  LGKH R+   
Sbjct: 305 CPP-GFPLTFVPAAAWNCGAPGPWNTTWFSPQA-SSAEKSLCSDTKASSTLGKHQRDNEI 364

Query: 364 ---------EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKT 423
                    EE +K RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES ITGGKNLFKT
Sbjct: 365 AKEEGILSKEEGLKQRNGYVLTPKTLRIDDPSEAAKSSIWATLGIKNES-ITGGKNLFKT 424

Query: 424 FQPKGHEKVHHVAEASSVLQANPAALSRSLVFHESS 429
           FQPKGHEK  H+AE SSVLQANPAALSRSL+FHESS
Sbjct: 425 FQPKGHEK-PHIAETSSVLQANPAALSRSLIFHESS 446

[Close]

BLAST of MS003949 vs. NCBI nr
Match: KAG6607450.1 (Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037108.1 Cyclic dof factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590.5 bits (1521), Expect = 1.2e-164
Identity = 325/458 (70.96%), Postives = 356/458 (77.73%), Query Frame = 0


Query: 4   SKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVDD-- 63
           SKDP+  LFGRKIPLSDDGE P IH     S  D+  PP    +++ V  + + TVDD  
Sbjct: 5   SKDPSFTLFGRKIPLSDDGEPPPIHSHAHDSPSDKDAPP---GKESTVDDDDEKTVDDSD 64

Query: 64  --------------PKTPSID-EETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSME 123
                         PKTPSID EE   PINGK +SE  NSEKTLKKPDKLLPCPRCKSME
Sbjct: 65  DSINLDAGEEVSVNPKTPSIDEEEAANPINGKPESENSNSEKTLKKPDKLLPCPRCKSME 124

Query: 124 TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALE 183
           TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+SASYYR ITISEAL+
Sbjct: 125 TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALD 184

Query: 184 AARLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKG 243
           AAR+E PNGT KPKFI  NNGRVLSFN+++ NS+P+V SVLNL+ENRVLSNG+KKFE+KG
Sbjct: 185 AARIEPPNGTDKPKFIC-NNGRVLSFNMESQNSEPMVGSVLNLAENRVLSNGVKKFEEKG 244

Query: 244 SDGCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPP 303
           S+ C+K S++ SM VQSSSE        TQ+  INGFPS +SCL   PWPFVWNS+VPPP
Sbjct: 245 SEVCDKSSNLSSMAVQSSSE------SHTQK--INGFPSQISCLSGVPWPFVWNSSVPPP 304

Query: 304 AFCPQGGFPLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE- 363
           AFCP G   L F PAAAWNCG PGPWNT WFSPQA SSAEK LCSD+K+S  LGKH R+ 
Sbjct: 305 AFCPPGFPSLTFVPAAAWNCGAPGPWNTTWFSPQA-SSAEKSLCSDTKASSTLGKHQRDN 364

Query: 364 -----------EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLF 423
                      EE +K RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES ITGGKNLF
Sbjct: 365 EIAKEEGISSKEEGLKQRNGYVLTPKTLRIDDPSEAAKSSIWATLGIKNES-ITGGKNLF 424

Query: 424 KTFQPKGHEKVHHVAEASSVLQANPAALSRSLVFHESS 429
           KTFQPKGHEK  H+AE SSVLQANPAALSRSLVFHESS
Sbjct: 425 KTFQPKGHEK-PHIAETSSVLQANPAALSRSLVFHESS 447

[Close]

BLAST of MS003949 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-86
Identity = 213/467 (45.61%), Postives = 265/467 (56.75%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSD---KDESQPPKVQTEQAIVSME--V 60
           M++++DPAIKLFG KIP     ES          D    D+  P KV  E +  +     
Sbjct: 2   MMETRDPAIKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSPEKVTPELSDKNNNNCN 61

Query: 61  DATVDDPKTPSIDEETEKPINGKTDSETPNSE-------KTLKKPDKLLPCPRCKSMETK 120
           D + ++ K  ++D+E     +    S+TP          KTLKKP K+LPCPRCKSMETK
Sbjct: 62  DNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETK 121

Query: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAA 180
           FCYYNNYN+NQPRHFCKACQRYWTAGGTMRNVPVGAGRRK+KSS+S+YR ITISEALEAA
Sbjct: 122 FCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISEALEAA 181

Query: 181 RLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPV--VASVLNLSENRVLSNGLK-KFED- 240
           RL+       P   +N   RVLSF L+A        +  V+ L E++ +SNG + +F   
Sbjct: 182 RLD-------PGLQANT--RVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGL 241

Query: 241 ---------KGSDGCEKISSVCSMG--------VQSSSEVGLEGRQRTQEPPINGFPSHV 300
                    +  D C   SSV +           QS S V  +         +NG+ + +
Sbjct: 242 ADQRLVARVENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQ-MNNNNNNNMNGY-ACI 301

Query: 301 SCLPWPFVWNSAVPPPAFCPQGGFPLPFYPAAAWNCGPGPWNTPWFSPQANSSAEKPLCS 360
             +PWP+ WN A+PPP F P  G+P+PFYP          W  P   P  +SS     CS
Sbjct: 302 PGVPWPYTWNPAMPPPGFYPPPGYPMPFYPY---------WTIPMLPPHQSSSPISQKCS 361

Query: 361 DSKSSPKLGKHLREEEAVKHRN--------GSVLTPKTLRIDDPSEAAKSSIWATLGIKN 420
           ++ +SP LGKH R+E + K  N        G VL PKTLRIDDP+EAAKSSIW TLGIKN
Sbjct: 362 NT-NSPTLGKHPRDEGSSKKDNETERKQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIKN 421

Query: 421 ESAITGGKNLFKTFQPKGHEKVHHVAEASSVLQANPAALSRSLVFHE 427
           E+    G  +FK F  K     +  AE S VL ANPAALSRS  FHE
Sbjct: 422 EAMCKAG-GMFKGFDHKTKMYNNDKAENSPVLSANPAALSRSHNFHE 446

[Close]

BLAST of MS003949 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-59
Identity = 179/435 (41.15%), Postives = 214/435 (49.20%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVD 60
           ML++KDPAIKLFG KIP                        P V        +EV     
Sbjct: 1   MLETKDPAIKLFGMKIPF-----------------------PTV--------LEV----- 60

Query: 61  DPKTPSIDEETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQP 120
                  DEE EK  N KT ++    +KTLKKP K+LPCPRC SMETKFCYYNNYNVNQP
Sbjct: 61  ------ADEEEEKNQN-KTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQP 120

Query: 121 RHFCKACQRYWTAGGTMRNVPVGAGRRKSK--SSASYYRQITISEALEAARLEAPNGTHK 180
           RHFCKACQRYWT+GGTMR+VP+GAGRRK+K  S  S+Y  +TISE               
Sbjct: 121 RHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE--------------- 180

Query: 181 PKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSN--GLKKFEDKGSDGCEKISSV 240
                  NG VLSF+L                + +V SN  G +K   +  +  E+ ++ 
Sbjct: 181 ------TNGPVLSFSLG--------------DDQKVSSNRFGNQKLVARIENNDERSNNN 240

Query: 241 CSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNSAVPPPAFCPQGGFPLPFY 300
            S G                   +N FP     + WP+ WN     PAF        P Y
Sbjct: 241 TSNG-------------------LNCFPG----VSWPYTWN-----PAF-------YPVY 296

Query: 301 PAAAWNCGPGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAV---KHRNGSVL 360
           P          W+ P  S   +SS           +  LGKH R+E+     K RNGSVL
Sbjct: 301 PY---------WSMPVLSSPVSSS----------PTSTLGKHSRDEDETVKQKQRNGSVL 296

Query: 361 TPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVHH--VAEASSVL 420
            PKTLRIDDP+EAAKSSIW TLGIKNE        +F  F  K   K+ +    E S VL
Sbjct: 361 VPKTLRIDDPNEAAKSSIWTTLGIKNEV-------MFNGFGSKKEVKLSNKEETETSLVL 296

Query: 421 QANPAALSRSLVFHE 427
            ANPAALSRS+ FHE
Sbjct: 421 CANPAALSRSINFHE 296

[Close]

BLAST of MS003949 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-58
Identity = 190/498 (38.15%), Postives = 241/498 (48.39%), Query Frame = 0


Query: 6   DPAIKLFGRKIPL--------------------------------------------SDD 65
           DPAIKLFG+ IPL                                             ++
Sbjct: 3   DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62

Query: 66  GESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVDDPKTPSIDEETEKPINGKTDS 125
           G+       +S +DK E +  + Q E+++ +   D T     T  I E+TE     KT+ 
Sbjct: 63  GDDVGDGGGESETDKKEEKDSECQ-EESLRNESNDVTT---TTSGITEKTETTKAAKTNE 122

Query: 126 ETP----NSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTM 185
           E+     + E  LKKPDK+LPCPRC SMETKFCYYNNYNVNQPRHFCK CQRYWTAGGTM
Sbjct: 123 ESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTM 182

Query: 186 RNVPVGAGRRKSKSSASYY-RQITISEALEAARLEAPNGTHKPKFISNNNGRVLSFNLDA 245
           RNVPVGAGRRK+KS AS+Y R ++I+ A EA +  A      P     N   +L+F  D+
Sbjct: 183 RNVPVGAGRRKNKSPASHYNRHVSITSA-EAMQKVARTDLQHP-----NGANLLTFGSDS 242

Query: 246 PNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMGVQSSSEVGLEGRQRTQ 305
              +  +AS LNL E  +L     K +    +  E +     +  Q++ E G        
Sbjct: 243 VLCES-MASGLNLVEKSLL-----KTQTVLQEPNEGLKITVPLN-QTNEEAG-------- 302

Query: 306 EPPINGFPSHVSCLP-----WPFVWNSAVPPPAFCPQGGFPLPFYPAAA-WNC---GPGP 365
              ++  P  V C P     WP+ WN               LPFYP  A W+C    PG 
Sbjct: 303 --TVSPLPK-VPCFPGPPPTWPYAWNGV---------SWTILPFYPPPAYWSCPGVSPGA 362

Query: 366 WNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAVKHRNG----------------S 425
           WN+  + PQ NS +       + +SP LGKH R+E A +                     
Sbjct: 363 WNSFTWMPQPNSPS-----GSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKPERC 422

Query: 426 VLTPKTLRIDDPSEAAKSSIWATLGI-KNESAITGGKNLFKTFQPKGHEKVHHVAEASSV 429
           +  PKTLRIDDP EAAKSSIW TLGI K+E+A T G     T + K       +      
Sbjct: 423 LWVPKTLRIDDPEEAAKSSIWETLGIKKDENADTFGAFRSST-KEKSSLSEGRLPGRRPE 457

[Close]

BLAST of MS003949 vs. ExPASy Swiss-Prot
Match: Q9SEZ3 (Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-43
Identity = 151/471 (32.06%), Postives = 218/471 (46.28%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKI-----------------------PLSDDGE------SPAIHPQQ 60
           M  S+D  IKLFGR I                       P  +D        SP I P +
Sbjct: 1   MSKSRDTEIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIR 60

Query: 61  SPSDKDESQPPKVQTEQAIVSM----EVDATVDDPKTPSIDEETEKPINGKTDSETPNSE 120
            P  K E +  K +    +  +    +  + +  P++   + + +  I   T + T + E
Sbjct: 61  VPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGE 120

Query: 121 KT--LKKPDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAG 180
           K+  LKKPDKL+PCPRC+S  TKFCYYNNYNVNQPR+FC+ CQRYWTAGG+MRNVPVG+G
Sbjct: 121 KSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSG 180

Query: 181 RRKSKS--SASYYRQITISEALEAARLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPVV 240
           RRK+K   S+++Y Q+T  +                   +NN+G +LSF           
Sbjct: 181 RRKNKGWPSSNHYLQVTSEDC-----------------DNNNSGTILSF----------- 240

Query: 241 ASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGF 300
                 SE+ V   G  +  D      + +S       ++ S  G         PP    
Sbjct: 241 ----GSSESSVTETGKHQSGDTAKISADSVSQ------ENKSYQGF-------LPPQVML 300

Query: 301 PSHVSCLPWPFVWNSAVPPPAFCPQGGFPLPFYPAAAWNCGPGPWNTPWFSPQANSSAEK 360
           P++ S  PWP+ W+   P  +F     +P+PFY    W C                    
Sbjct: 301 PNNSS--PWPYQWSPTGPNASF-----YPVPFY----WGC------------------TV 360

Query: 361 PLCSDSKSSPKLGKHLRE--EEAVKHRNGSVLTPKTLRIDDP----SEAAKSSIWATLGI 420
           P+   S++S  LGK  R+  E  +   N ++ T +   + +      EA+KS++W+ L  
Sbjct: 361 PIYPTSETSSCLGKRSRDQTEGRINDTNTTITTTRARLVSESLRMNIEASKSAVWSKLPT 396

Query: 421 KNESAITGGKNLFKTFQPKGH-EKVHHVAEASSVLQANPAALSRSLVFHES 428
           K E   T G +LF  F  KG+  +   V+E S  LQANPAA+SR++ F ES
Sbjct: 421 KPEKK-TQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRES 396

[Close]

BLAST of MS003949 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-28
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 69  EETEKPINGKTDSETPNSEKTL-KKPDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKAC 128
           ++ +  +   T   +P+S+ T  K+PDK++PCPRCKSMETKFCY+NNYNVNQPRHFCK C
Sbjct: 33  QQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGC 92

Query: 129 QRYWTAGGTMRNVPVGAGRRKSK 151
           QRYWTAGG +RNVPVGAGRRKSK
Sbjct: 93  QRYWTAGGALRNVPVGAGRRKSK 115

[Close]

BLAST of MS003949 vs. ExPASy TrEMBL
Match: A0A6J1C5L1 (cyclic dof factor 3-like OS=Momordica charantia OX=3673 GN=LOC111008611 PE=4 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 1.5e-234
Identity = 409/428 (95.56%), Postives = 410/428 (95.79%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVD 60
           MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPK            DATVD
Sbjct: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPK------------DATVD 60

Query: 61  DPKTPSIDEETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQP 120
           DPKTPSIDEETEKPINGKTDSETPNSEKTLK PDKLLPCPRCKSMETKFCYYNNYNVNQP
Sbjct: 61  DPKTPSIDEETEKPINGKTDSETPNSEKTLKXPDKLLPCPRCKSMETKFCYYNNYNVNQP 120

Query: 121 RHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAARLEAPNGTHKPK 180
           RHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALE ARLEAPNGTHKPK
Sbjct: 121 RHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEGARLEAPNGTHKPK 180

Query: 181 FISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMG 240
           FISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMG
Sbjct: 181 FISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMG 240

Query: 241 VQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNSAVPPPAFCPQGGFPLPFYPAAA 300
           VQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNS+VPPPAFC QGGFPLPFYPAAA
Sbjct: 241 VQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNSSVPPPAFCXQGGFPLPFYPAAA 300

Query: 301 WNCGPGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAVKHRNGSVLTPKTLRI 360
           WNCGPGPWNTPWFSPQAN S EKPLCSDSKSSPKLGKHLREEEAVKHRNGSVLTPKTLRI
Sbjct: 301 WNCGPGPWNTPWFSPQANXSXEKPLCSDSKSSPKLGKHLREEEAVKHRNGSVLTPKTLRI 360

Query: 361 DDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVHHVAEASSVLQANPAALSR 420
           DDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVH VAEASSVLQANPAALSR
Sbjct: 361 DDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVHXVAEASSVLQANPAALSR 416

Query: 421 SLVFHESS 429
           SLVFHESS
Sbjct: 421 SLVFHESS 416

[Close]

BLAST of MS003949 vs. ExPASy TrEMBL
Match: A0A0A0LVJ4 (DOF domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G033250 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.5e-165
Identity = 328/451 (72.73%), Postives = 359/451 (79.60%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAI-----HPQQSPSDKDESQPPKVQTEQAIVSMEV 60
           MLDSKDP IKLFGR+IPLSDD E PA+     H + +  D+ E +P     +   +    
Sbjct: 1   MLDSKDPTIKLFGRQIPLSDDAEPPALLSHAEHRKDAAIDEPE-KPVDDSDDSGNIERGE 60

Query: 61  DATVDDPKTPSIDEE-TEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNN 120
           +A+V +PKTPSIDEE T  P++G+ +SE  NSEKTLKKPDKLLPCPRCKSMETKFCYYNN
Sbjct: 61  EASV-NPKTPSIDEETTTTPVDGEPESEKSNSEKTLKKPDKLLPCPRCKSMETKFCYYNN 120

Query: 121 YNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAARLEAPN 180
           YNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+SASYYR ITISEALEAAR+E+PN
Sbjct: 121 YNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALEAARIESPN 180

Query: 181 GTHKPKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSD-GCEKI 240
           GTHKPKFIS NNGRVLSFNLDAP SDPV+ SVLNL ENRVLSNG+KKFE+KG D GCEK 
Sbjct: 181 GTHKPKFIS-NNGRVLSFNLDAPTSDPVMGSVLNLGENRVLSNGVKKFEEKGVDQGCEKS 240

Query: 241 SSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPPAFCPQGG 300
           SS+ SM VQSSSE+            INGFPS +SCL   PWPFVWNS+VPPPAF P  G
Sbjct: 241 SSLSSMPVQSSSEL-----------KINGFPSQISCLSGVPWPFVWNSSVPPPAFTPP-G 300

Query: 301 FPLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE-------- 360
           FP+ F+PAAAWN G PGPWNTPWFSPQ     EK LCSD+K+S  LGKH R+        
Sbjct: 301 FPMSFFPAAAWNSGVPGPWNTPWFSPQ----PEKSLCSDTKASSTLGKHQRDHEMSKEDA 360

Query: 361 ----EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKG 420
               EE +K RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES ITGGKNLFKTFQPKG
Sbjct: 361 ISSKEEGIKKRNGHVLTPKTLRIDDPSEAAKSSIWATLGIKNES-ITGGKNLFKTFQPKG 420

Query: 421 HEKVHHVAEASSVLQANPAALSRSLVFHESS 429
           HEKV HVAE SSVLQANPAALSRSLVFHESS
Sbjct: 421 HEKV-HVAETSSVLQANPAALSRSLVFHESS 430

[Close]

BLAST of MS003949 vs. ExPASy TrEMBL
Match: A0A6J1KFB2 (cyclic dof factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493354 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 5.6e-165
Identity = 332/456 (72.81%), Postives = 360/456 (78.95%), Query Frame = 0


Query: 4   SKDPAIKLFGRKIPLSDDGESPAI--HPQQSPSDKDESQPPKVQT--------EQAIVSM 63
           SKDP+  LFGRKIPLSDDGE P I  H   SPSDKD + P K  T        + +  S+
Sbjct: 5   SKDPSFTLFGRKIPLSDDGEPPPIHSHAHDSPSDKD-APPGKESTVDDDEKTVDDSDDSI 64

Query: 64  EVDATVD---DPKTPSID-EETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKF 123
            VDA  +   +PKTPSID EE   PINGK +SE  NSEKTLKKPDKLLPCPRCKSMETKF
Sbjct: 65  NVDAGEEVGVNPKTPSIDEEEAANPINGKPESENSNSEKTLKKPDKLLPCPRCKSMETKF 124

Query: 124 CYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAAR 183
           CYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+S SYYR ITISEAL+AAR
Sbjct: 125 CYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSVSYYRHITISEALDAAR 184

Query: 184 LEAPNGTHKPKFISNNNGRVLSFNLDAPNSD-PVVASVLNLSENRVLSNGLKKFEDKGSD 243
           +E PNGT KPKFI  NNGRVLSFNLD+ NSD PVV SVLNL+ENRVLSNG+KKFE+KGS+
Sbjct: 185 IEPPNGTDKPKFI-GNNGRVLSFNLDSQNSDPPVVGSVLNLAENRVLSNGVKKFEEKGSE 244

Query: 244 GCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPPAF 303
            C+K S++ S  VQSSSE        TQ+  INGFPS +SCL   PWPFVWNS+VPPPAF
Sbjct: 245 VCDKSSNLSSTAVQSSSE------SHTQK--INGFPSQISCLSGVPWPFVWNSSVPPPAF 304

Query: 304 CPQGGFPLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE--- 363
           CP  GFPL F PAAAWNCG PGPWNT WFSPQA SSAEK LCSD+K+S  LGKH R+   
Sbjct: 305 CPP-GFPLTFVPAAAWNCGAPGPWNTTWFSPQA-SSAEKSLCSDTKASSTLGKHQRDNEI 364

Query: 364 ---------EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKT 423
                    EE +K RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES ITGGKNLFKT
Sbjct: 365 AKEEGILSKEEGLKQRNGYVLTPKTLRIDDPSEAAKSSIWATLGIKNES-ITGGKNLFKT 424

Query: 424 FQPKGHEKVHHVAEASSVLQANPAALSRSLVFHESS 429
           FQPKGHEK  H+AE SSVLQANPAALSRSL+FHESS
Sbjct: 425 FQPKGHEK-PHIAETSSVLQANPAALSRSLIFHESS 446

[Close]

BLAST of MS003949 vs. ExPASy TrEMBL
Match: A0A6J1G910 (cyclic dof factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452058 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 7.4e-165
Identity = 325/458 (70.96%), Postives = 355/458 (77.51%), Query Frame = 0


Query: 4   SKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVDD-- 63
           SKDP+  LFGRKIPLSDDGE P IH     S  D+  PP    +++ V  + + TVDD  
Sbjct: 5   SKDPSFTLFGRKIPLSDDGEPPPIHSHAHDSPSDKDAPP---GKESTVDDDDEKTVDDSD 64

Query: 64  --------------PKTPSID-EETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSME 123
                         PKTPSID EE   PINGK +SE  NSEKTLKKPDKLLPCPRCKSME
Sbjct: 65  DSINLDAGEEVSVNPKTPSIDEEEAANPINGKPESENSNSEKTLKKPDKLLPCPRCKSME 124

Query: 124 TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALE 183
           TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+SASYYR ITISEAL+
Sbjct: 125 TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALD 184

Query: 184 AARLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKG 243
           AAR+E PNGT KPKFI  NNGRVLSFN+++ NS+P+V SVLNL+ENRVLSNG+KKFE+KG
Sbjct: 185 AARIEPPNGTDKPKFIC-NNGRVLSFNMESQNSEPMVGSVLNLAENRVLSNGVKKFEEKG 244

Query: 244 SDGCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPP 303
           S+ C+K S++ SM VQSSSE        TQ+  INGFPS +SCL   PWPFVWNS+VPPP
Sbjct: 245 SEVCDKSSNLSSMAVQSSSE------SHTQK--INGFPSQISCLSGVPWPFVWNSSVPPP 304

Query: 304 AFCPQGGFPLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE- 363
           AFCP G   L F PAAAWNCG PGPWNT WFSPQA SSAEK LCSD+K+S  LGKH R+ 
Sbjct: 305 AFCPPGFPSLTFVPAAAWNCGAPGPWNTTWFSPQA-SSAEKSLCSDTKASSTLGKHQRDN 364

Query: 364 -----------EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLF 423
                      EE +K RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES ITGGKNLF
Sbjct: 365 EMAKEEWISSKEEGLKQRNGYVLTPKTLRIDDPSEAAKSSIWATLGIKNES-ITGGKNLF 424

Query: 424 KTFQPKGHEKVHHVAEASSVLQANPAALSRSLVFHESS 429
           KTFQPKGHEK  H AE SSVLQANPAALSRSLVFHESS
Sbjct: 425 KTFQPKGHEKT-HTAETSSVLQANPAALSRSLVFHESS 447

[Close]

BLAST of MS003949 vs. ExPASy TrEMBL
Match: A0A1S3B7K6 (cyclic dof factor 3 OS=Cucumis melo OX=3656 GN=LOC103486647 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 8.1e-164
Identity = 322/457 (70.46%), Postives = 355/457 (77.68%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAI-----------HPQQSPSDKDESQPPKVQTEQA 60
           MLDSKDP IKLFGR+IPLSDD E+PA+            P++  +  +  +P     +  
Sbjct: 1   MLDSKDPTIKLFGRQIPLSDDAETPAVLSHDFSSHKHPEPRKDAAIDEPEKPVDDSDDLR 60

Query: 61  IVSMEVDATVDDPKTPSIDEE-TEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETK 120
            +  E +A   +PKTPSIDEE T  P+NG+ +SE  NSEKTLKKPDKLLPCPRCKSMETK
Sbjct: 61  NIEREEEAASVNPKTPSIDEETTTTPVNGEPESEKSNSEKTLKKPDKLLPCPRCKSMETK 120

Query: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAA 180
           FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSK+SASYYR ITISEALEAA
Sbjct: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALEAA 180

Query: 181 RLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSNGLKKFEDKGSD 240
           R+E+PNGT KPKFI NNNGRVLSFNLDAP+SDPV+ S+LNL ENRVLSNG+KKFE+K  D
Sbjct: 181 RIESPNGTQKPKFI-NNNGRVLSFNLDAPSSDPVMGSILNLGENRVLSNGVKKFEEKAVD 240

Query: 241 -GCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCL---PWPFVWNSAVPPPA 300
            GCEK SS+ SM VQSSSE+            INGFPS +SCL   PWPFVWNS+VPPP 
Sbjct: 241 QGCEKNSSLSSMPVQSSSEL-----------KINGFPSQISCLSGVPWPFVWNSSVPPPT 300

Query: 301 FCPQGGFPLPFYPAAAWNCG-PGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLRE-- 360
           F P  GFPL F+PAAAWN G PGPWNTPWFSPQ     EK LCSD+K+S  LGKH R+  
Sbjct: 301 FTPP-GFPLSFFPAAAWNSGVPGPWNTPWFSPQ----PEKSLCSDTKASSTLGKHQRDHE 360

Query: 361 ----------EEAVKHRNGSVLTPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFK 420
                     EE  K RNG VLTPKTLRIDDPSEAAKSSIWATLGIKNES +TGGKNLFK
Sbjct: 361 MAKEDAISSKEEVFKQRNGHVLTPKTLRIDDPSEAAKSSIWATLGIKNES-LTGGKNLFK 420

Query: 421 TFQPKGHEKVHHVAEASSVLQANPAALSRSLVFHESS 429
           TFQPKGH+KV HVAE SSVLQANPAALSRSLVFHESS
Sbjct: 421 TFQPKGHQKV-HVAETSSVLQANPAALSRSLVFHESS 438

[Close]

BLAST of MS003949 vs. TAIR 10
Match: AT3G47500.1 (cycling DOF factor 3 )

HSP 1 Score: 321.6 bits (823), Expect = 9.4e-88
Identity = 213/467 (45.61%), Postives = 265/467 (56.75%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSD---KDESQPPKVQTEQAIVSME--V 60
           M++++DPAIKLFG KIP     ES          D    D+  P KV  E +  +     
Sbjct: 2   MMETRDPAIKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSPEKVTPELSDKNNNNCN 61

Query: 61  DATVDDPKTPSIDEETEKPINGKTDSETPNSE-------KTLKKPDKLLPCPRCKSMETK 120
           D + ++ K  ++D+E     +    S+TP          KTLKKP K+LPCPRCKSMETK
Sbjct: 62  DNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETK 121

Query: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSASYYRQITISEALEAA 180
           FCYYNNYN+NQPRHFCKACQRYWTAGGTMRNVPVGAGRRK+KSS+S+YR ITISEALEAA
Sbjct: 122 FCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISEALEAA 181

Query: 181 RLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPV--VASVLNLSENRVLSNGLK-KFED- 240
           RL+       P   +N   RVLSF L+A        +  V+ L E++ +SNG + +F   
Sbjct: 182 RLD-------PGLQANT--RVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGL 241

Query: 241 ---------KGSDGCEKISSVCSMG--------VQSSSEVGLEGRQRTQEPPINGFPSHV 300
                    +  D C   SSV +           QS S V  +         +NG+ + +
Sbjct: 242 ADQRLVARVENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQ-MNNNNNNNMNGY-ACI 301

Query: 301 SCLPWPFVWNSAVPPPAFCPQGGFPLPFYPAAAWNCGPGPWNTPWFSPQANSSAEKPLCS 360
             +PWP+ WN A+PPP F P  G+P+PFYP          W  P   P  +SS     CS
Sbjct: 302 PGVPWPYTWNPAMPPPGFYPPPGYPMPFYPY---------WTIPMLPPHQSSSPISQKCS 361

Query: 361 DSKSSPKLGKHLREEEAVKHRN--------GSVLTPKTLRIDDPSEAAKSSIWATLGIKN 420
           ++ +SP LGKH R+E + K  N        G VL PKTLRIDDP+EAAKSSIW TLGIKN
Sbjct: 362 NT-NSPTLGKHPRDEGSSKKDNETERKQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIKN 421

Query: 421 ESAITGGKNLFKTFQPKGHEKVHHVAEASSVLQANPAALSRSLVFHE 427
           E+    G  +FK F  K     +  AE S VL ANPAALSRS  FHE
Sbjct: 422 EAMCKAG-GMFKGFDHKTKMYNNDKAENSPVLSANPAALSRSHNFHE 446

[Close]

BLAST of MS003949 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 231.9 bits (590), Expect = 9.8e-61
Identity = 179/435 (41.15%), Postives = 214/435 (49.20%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKIPLSDDGESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVD 60
           ML++KDPAIKLFG KIP                        P V        +EV     
Sbjct: 1   MLETKDPAIKLFGMKIPF-----------------------PTV--------LEV----- 60

Query: 61  DPKTPSIDEETEKPINGKTDSETPNSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQP 120
                  DEE EK  N KT ++    +KTLKKP K+LPCPRC SMETKFCYYNNYNVNQP
Sbjct: 61  ------ADEEEEKNQN-KTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQP 120

Query: 121 RHFCKACQRYWTAGGTMRNVPVGAGRRKSK--SSASYYRQITISEALEAARLEAPNGTHK 180
           RHFCKACQRYWT+GGTMR+VP+GAGRRK+K  S  S+Y  +TISE               
Sbjct: 121 RHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE--------------- 180

Query: 181 PKFISNNNGRVLSFNLDAPNSDPVVASVLNLSENRVLSN--GLKKFEDKGSDGCEKISSV 240
                  NG VLSF+L                + +V SN  G +K   +  +  E+ ++ 
Sbjct: 181 ------TNGPVLSFSLG--------------DDQKVSSNRFGNQKLVARIENNDERSNNN 240

Query: 241 CSMGVQSSSEVGLEGRQRTQEPPINGFPSHVSCLPWPFVWNSAVPPPAFCPQGGFPLPFY 300
            S G                   +N FP     + WP+ WN     PAF        P Y
Sbjct: 241 TSNG-------------------LNCFPG----VSWPYTWN-----PAF-------YPVY 296

Query: 301 PAAAWNCGPGPWNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAV---KHRNGSVL 360
           P          W+ P  S   +SS           +  LGKH R+E+     K RNGSVL
Sbjct: 301 PY---------WSMPVLSSPVSSS----------PTSTLGKHSRDEDETVKQKQRNGSVL 296

Query: 361 TPKTLRIDDPSEAAKSSIWATLGIKNESAITGGKNLFKTFQPKGHEKVHH--VAEASSVL 420
            PKTLRIDDP+EAAKSSIW TLGIKNE        +F  F  K   K+ +    E S VL
Sbjct: 361 VPKTLRIDDPNEAAKSSIWTTLGIKNEV-------MFNGFGSKKEVKLSNKEETETSLVL 296

Query: 421 QANPAALSRSLVFHE 427
            ANPAALSRS+ FHE
Sbjct: 421 CANPAALSRSINFHE 296

[Close]

BLAST of MS003949 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 226.9 bits (577), Expect = 3.1e-59
Identity = 190/498 (38.15%), Postives = 241/498 (48.39%), Query Frame = 0


Query: 6   DPAIKLFGRKIPL--------------------------------------------SDD 65
           DPAIKLFG+ IPL                                             ++
Sbjct: 3   DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62

Query: 66  GESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVDDPKTPSIDEETEKPINGKTDS 125
           G+       +S +DK E +  + Q E+++ +   D T     T  I E+TE     KT+ 
Sbjct: 63  GDDVGDGGGESETDKKEEKDSECQ-EESLRNESNDVTT---TTSGITEKTETTKAAKTNE 122

Query: 126 ETP----NSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTM 185
           E+     + E  LKKPDK+LPCPRC SMETKFCYYNNYNVNQPRHFCK CQRYWTAGGTM
Sbjct: 123 ESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTM 182

Query: 186 RNVPVGAGRRKSKSSASYY-RQITISEALEAARLEAPNGTHKPKFISNNNGRVLSFNLDA 245
           RNVPVGAGRRK+KS AS+Y R ++I+ A EA +  A      P     N   +L+F  D+
Sbjct: 183 RNVPVGAGRRKNKSPASHYNRHVSITSA-EAMQKVARTDLQHP-----NGANLLTFGSDS 242

Query: 246 PNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMGVQSSSEVGLEGRQRTQ 305
              +  +AS LNL E  +L     K +    +  E +     +  Q++ E G        
Sbjct: 243 VLCES-MASGLNLVEKSLL-----KTQTVLQEPNEGLKITVPLN-QTNEEAG-------- 302

Query: 306 EPPINGFPSHVSCLP-----WPFVWNSAVPPPAFCPQGGFPLPFYPAAA-WNC---GPGP 365
              ++  P  V C P     WP+ WN               LPFYP  A W+C    PG 
Sbjct: 303 --TVSPLPK-VPCFPGPPPTWPYAWNGV---------SWTILPFYPPPAYWSCPGVSPGA 362

Query: 366 WNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAVKHRNG----------------S 425
           WN+  + PQ NS +       + +SP LGKH R+E A +                     
Sbjct: 363 WNSFTWMPQPNSPS-----GSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKPERC 422

Query: 426 VLTPKTLRIDDPSEAAKSSIWATLGI-KNESAITGGKNLFKTFQPKGHEKVHHVAEASSV 429
           +  PKTLRIDDP EAAKSSIW TLGI K+E+A T G     T + K       +      
Sbjct: 423 LWVPKTLRIDDPEEAAKSSIWETLGIKKDENADTFGAFRSST-KEKSSLSEGRLPGRRPE 457

[Close]

BLAST of MS003949 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 226.9 bits (577), Expect = 3.1e-59
Identity = 190/498 (38.15%), Postives = 241/498 (48.39%), Query Frame = 0


Query: 6   DPAIKLFGRKIPL--------------------------------------------SDD 65
           DPAIKLFG+ IPL                                             ++
Sbjct: 3   DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62

Query: 66  GESPAIHPQQSPSDKDESQPPKVQTEQAIVSMEVDATVDDPKTPSIDEETEKPINGKTDS 125
           G+       +S +DK E +  + Q E+++ +   D T     T  I E+TE     KT+ 
Sbjct: 63  GDDVGDGGGESETDKKEEKDSECQ-EESLRNESNDVTT---TTSGITEKTETTKAAKTNE 122

Query: 126 ETP----NSEKTLKKPDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTM 185
           E+     + E  LKKPDK+LPCPRC SMETKFCYYNNYNVNQPRHFCK CQRYWTAGGTM
Sbjct: 123 ESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTM 182

Query: 186 RNVPVGAGRRKSKSSASYY-RQITISEALEAARLEAPNGTHKPKFISNNNGRVLSFNLDA 245
           RNVPVGAGRRK+KS AS+Y R ++I+ A EA +  A      P     N   +L+F  D+
Sbjct: 183 RNVPVGAGRRKNKSPASHYNRHVSITSA-EAMQKVARTDLQHP-----NGANLLTFGSDS 242

Query: 246 PNSDPVVASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMGVQSSSEVGLEGRQRTQ 305
              +  +AS LNL E  +L     K +    +  E +     +  Q++ E G        
Sbjct: 243 VLCES-MASGLNLVEKSLL-----KTQTVLQEPNEGLKITVPLN-QTNEEAG-------- 302

Query: 306 EPPINGFPSHVSCLP-----WPFVWNSAVPPPAFCPQGGFPLPFYPAAA-WNC---GPGP 365
              ++  P  V C P     WP+ WN               LPFYP  A W+C    PG 
Sbjct: 303 --TVSPLPK-VPCFPGPPPTWPYAWNGV---------SWTILPFYPPPAYWSCPGVSPGA 362

Query: 366 WNTPWFSPQANSSAEKPLCSDSKSSPKLGKHLREEEAVKHRNG----------------S 425
           WN+  + PQ NS +       + +SP LGKH R+E A +                     
Sbjct: 363 WNSFTWMPQPNSPS-----GSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKPERC 422

Query: 426 VLTPKTLRIDDPSEAAKSSIWATLGI-KNESAITGGKNLFKTFQPKGHEKVHHVAEASSV 429
           +  PKTLRIDDP EAAKSSIW TLGI K+E+A T G     T + K       +      
Sbjct: 423 LWVPKTLRIDDPEEAAKSSIWETLGIKKDENADTFGAFRSST-KEKSSLSEGRLPGRRPE 457

[Close]

BLAST of MS003949 vs. TAIR 10
Match: AT1G69570.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 178.7 bits (452), Expect = 9.8e-45
Identity = 151/471 (32.06%), Postives = 218/471 (46.28%), Query Frame = 0


Query: 1   MLDSKDPAIKLFGRKI-----------------------PLSDDGE------SPAIHPQQ 60
           M  S+D  IKLFGR I                       P  +D        SP I P +
Sbjct: 1   MSKSRDTEIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIR 60

Query: 61  SPSDKDESQPPKVQTEQAIVSM----EVDATVDDPKTPSIDEETEKPINGKTDSETPNSE 120
            P  K E +  K +    +  +    +  + +  P++   + + +  I   T + T + E
Sbjct: 61  VPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGE 120

Query: 121 KT--LKKPDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAG 180
           K+  LKKPDKL+PCPRC+S  TKFCYYNNYNVNQPR+FC+ CQRYWTAGG+MRNVPVG+G
Sbjct: 121 KSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSG 180

Query: 181 RRKSKS--SASYYRQITISEALEAARLEAPNGTHKPKFISNNNGRVLSFNLDAPNSDPVV 240
           RRK+K   S+++Y Q+T  +                   +NN+G +LSF           
Sbjct: 181 RRKNKGWPSSNHYLQVTSEDC-----------------DNNNSGTILSF----------- 240

Query: 241 ASVLNLSENRVLSNGLKKFEDKGSDGCEKISSVCSMGVQSSSEVGLEGRQRTQEPPINGF 300
                 SE+ V   G  +  D      + +S       ++ S  G         PP    
Sbjct: 241 ----GSSESSVTETGKHQSGDTAKISADSVSQ------ENKSYQGF-------LPPQVML 300

Query: 301 PSHVSCLPWPFVWNSAVPPPAFCPQGGFPLPFYPAAAWNCGPGPWNTPWFSPQANSSAEK 360
           P++ S  PWP+ W+   P  +F     +P+PFY    W C                    
Sbjct: 301 PNNSS--PWPYQWSPTGPNASF-----YPVPFY----WGC------------------TV 360

Query: 361 PLCSDSKSSPKLGKHLRE--EEAVKHRNGSVLTPKTLRIDDP----SEAAKSSIWATLGI 420
           P+   S++S  LGK  R+  E  +   N ++ T +   + +      EA+KS++W+ L  
Sbjct: 361 PIYPTSETSSCLGKRSRDQTEGRINDTNTTITTTRARLVSESLRMNIEASKSAVWSKLPT 396

Query: 421 KNESAITGGKNLFKTFQPKGH-EKVHHVAEASSVLQANPAALSRSLVFHES 428
           K E   T G +LF  F  KG+  +   V+E S  LQANPAA+SR++ F ES
Sbjct: 421 KPEKK-TQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRES 396

The following BLAST results are available for this feature:

BLAST of MS003949 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137050.1	5.3e-234	95.33	cyclic dof factor 3-like [Momordica charantia]	[more]
XP_004137585.1	3.1e-165	72.73	cyclic dof factor 3 [Cucumis sativus] >KGN64006.1 hypothetical protein Csa_01350...	[more]
XP_038895608.1	6.8e-165	71.56	cyclic dof factor 3-like [Benincasa hispida]	[more]
XP_022998793.1	1.2e-164	72.81	cyclic dof factor 1-like isoform X1 [Cucurbita maxima] >XP_022998794.1 cyclic do...	[more]
KAG6607450.1	1.2e-164	70.96	Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037108...	[more]

BLAST of MS003949 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFV3	1.3e-86	45.61	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]
Q8W1E3	1.4e-59	41.15	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q93ZL5	4.4e-58	38.15	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q9SEZ3	1.4e-43	32.06	Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1	[more]
P68350	2.1e-28	68.67	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]

BLAST of MS003949 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5L1	1.5e-234	95.56	cyclic dof factor 3-like OS=Momordica charantia OX=3673 GN=LOC111008611 PE=4 SV=...	[more]
A0A0A0LVJ4	1.5e-165	72.73	DOF domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G033250...	[more]
A0A6J1KFB2	5.6e-165	72.81	cyclic dof factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493354 ...	[more]
A0A6J1G910	7.4e-165	70.96	cyclic dof factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452058 PE=4 SV=1	[more]
A0A1S3B7K6	8.1e-164	70.46	cyclic dof factor 3 OS=Cucumis melo OX=3656 GN=LOC103486647 PE=4 SV=1	[more]

BLAST of MS003949 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47500.1	9.4e-88	45.61	cycling DOF factor 3	[more]
AT5G62430.1	9.8e-61	41.15	cycling DOF factor 1	[more]
AT5G39660.1	3.1e-59	38.15	cycling DOF factor 2	[more]
AT5G39660.2	3.1e-59	38.15	cycling DOF factor 2	[more]
AT1G69570.1	9.8e-45	32.06	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 95..151 e-value: 2.5E-32 score: 110.8
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 99..135
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 97..151 score: 28.509169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..77
None	No IPR available	PANTHER	PTHR31089:SF31	CYCLIC DOF FACTOR 1	coord: 1..427
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 1..427

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003949.1	MS003949.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding