![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS003948 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCACCCACCCCTCTCCTTCGTCTACTCGTCATATTCCTTGGATTTTGTAGCCTTCTCTCTTCCAATGCTGTCCCAACTTCAAGTAAGCCTCACTAATCAGTCAATTCCCTCTCTGCCTCTTTCCTCTGTTTTTCATGGAACTAACTGCTTAGTTCTGATCTGAATCTTCAGGAAGTGTAAGCCTCATTCATGGAGCTGATCAATTTCTCCAAGTTTCAAGCAAAACCCACATGGTATATCACATTTCCCATCAACAAGTTTCCATCTTTCTTTCTTGTCAACTTAACATATTATCAGAACAGCAAAGATTGAACATCAATAATTGAACATGTGTTATGCAGGTGAGTGGTGGAGAGGAAGAAGTGAAGCATGGAAGGATGGTTGTGGCACTGAATGATTACCCAGGCTCCGGAGCCAACAATCGCCACACACCAAGACCACAATTTAGAGGCTGTGCTGATTGT ATGGCAGCACCCACCCCTCTCCTTCGTCTACTCGTCATATTCCTTGGATTTTGTAGCCTTCTCTCTTCCAATGCTGTCCCAACTTCAAGAAGTGTAAGCCTCATTCATGGAGCTGATCAATTTCTCCAAGTTTCAAGCAAAACCCACATGGTGAGTGGTGGAGAGGAAGAAGTGAAGCATGGAAGGATGGTTGTGGCACTGAATGATTACCCAGGCTCCGGAGCCAACAATCGCCACACACCAAGACCACAATTTAGAGGCTGTGCTGATTGT ATGGCAGCACCCACCCCTCTCCTTCGTCTACTCGTCATATTCCTTGGATTTTGTAGCCTTCTCTCTTCCAATGCTGTCCCAACTTCAAGAAGTGTAAGCCTCATTCATGGAGCTGATCAATTTCTCCAAGTTTCAAGCAAAACCCACATGGTGAGTGGTGGAGAGGAAGAAGTGAAGCATGGAAGGATGGTTGTGGCACTGAATGATTACCCAGGCTCCGGAGCCAACAATCGCCACACACCAAGACCACAATTTAGAGGCTGTGCTGATTGT MAAPTPLLRLLVIFLGFCSLLSSNAVPTSRSVSLIHGADQFLQVSSKTHMVSGGEEEVKHGRMVVALNDYPGSGANNRHTPRPQFRGCADC Homology
BLAST of MS003948 vs. NCBI nr
Match: XP_022137483.1 (uncharacterized protein LOC111008913 [Momordica charantia]) HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MS003948 vs. NCBI nr
Match: XP_038895124.1 (uncharacterized protein LOC120083435 [Benincasa hispida]) HSP 1 Score: 147.5 bits (371), Expect = 5.5e-32 Identity = 74/91 (81.32%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MS003948 vs. NCBI nr
Match: XP_008442734.1 (PREDICTED: uncharacterized protein LOC103486492 [Cucumis melo] >TYJ98895.1 putative Disulfide bond formation protein B 2 [Cucumis melo var. makuwa]) HSP 1 Score: 142.9 bits (359), Expect = 1.4e-30 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MS003948 vs. NCBI nr
Match: KAA0036087.1 (putative Disulfide bond formation protein B 2 [Cucumis melo var. makuwa]) HSP 1 Score: 141.7 bits (356), Expect = 3.0e-30 Identity = 71/91 (78.02%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MS003948 vs. NCBI nr
Match: KAG6607449.1 (hypothetical protein SDJN03_00791, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037107.1 hypothetical protein SDJN02_00728 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139.0 bits (349), Expect = 2.0e-29 Identity = 68/89 (76.40%), Postives = 74/89 (83.15%), Query Frame = 0
BLAST of MS003948 vs. ExPASy TrEMBL
Match: A0A6J1CAG5 (uncharacterized protein LOC111008913 OS=Momordica charantia OX=3673 GN=LOC111008913 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 6.8e-44 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MS003948 vs. ExPASy TrEMBL
Match: A0A5D3BKK4 (Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00920 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.6e-31 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MS003948 vs. ExPASy TrEMBL
Match: A0A1S3B758 (uncharacterized protein LOC103486492 OS=Cucumis melo OX=3656 GN=LOC103486492 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.6e-31 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MS003948 vs. ExPASy TrEMBL
Match: A0A5A7T3C3 (Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00820 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30 Identity = 71/91 (78.02%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MS003948 vs. ExPASy TrEMBL
Match: A0A6J1GC04 (uncharacterized protein LOC111452592 OS=Cucurbita moschata OX=3662 GN=LOC111452592 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 9.5e-30 Identity = 68/89 (76.40%), Postives = 74/89 (83.15%), Query Frame = 0
BLAST of MS003948 vs. TAIR 10
Match: AT3G47510.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 4.7e-05 Identity = 38/86 (44.19%), Postives = 45/86 (52.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|