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MS003947 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGATCACATGGTTTTATGTGTGGACCGCCTCATAACATCTGAAAGTTTGCCATTGCTGCAAGGAACTACTGCTCCAGGATCTTCTTTAGAACCTTCATCTTCTCAGAATTCAGAGCCACCTGTTTGTGCTATTTCTGTTGAAGATGCGGATGAACATGATGGATCTGAAGATGACCCCCTTATTCAGACAGTTGAATGTCGCATATGTCAAGAAGAGGATAGTATTAAGAATTTGGAGATTCCTTGTGCTTGCAGTGGCAGCTTGAAGGTACCGTTTGCTAACTTATATTGCCTTGGTCCGTATAGTTTAACAAAATGGTTCTCTAGTCAAGAGACAATTTCATCATAAGAAGAGTCTATTTTGCTAATGTAGCACTAGCATATATCAGTGCCTTATATATTTATGGTAATACTCATTATTAAGTGTGAATTCTTAGATGGTTGCCTTGGTCTCTTGACTTAAAAGGGCCGGAATAGAGGGTAATTATGATTGTCTTTATTGGTTCTGAGCATTATTTCTATTTTGCAAAATGTGAAGCAGACTTTTCCCTGACATGAACTGTTTGGGAAGAAAGCATGATAAAAAGAGAGTATATTTCCAATTCTTATTATTTTCATCTGTATTTTTCTATTAGTTGGAATCCCATGGCAATGTGTAACATGTTCTTGGTGTTGGAAGTAATCAGGAAAGAAACCTTTTTTTAGGTTGTGGTAGTTTTCTTGACAAGGGGACACACCACATTTCAAGCCACACCTTTGAGTTGCATTTGTTCTATCTGTTGTTTGGTCAAGCCCTGCGCCCATGACCCCTTGGAGAAGTCTGATTATTATCATCATTATTACAGTTACAATTAATCTGTTTTAGATGCTTATAATTCTATTTAATACTTTTTCCTATTACAGTATGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAAAAGGGAGATATAACTTGTGAAATCTGTCATCAGGTAAATTTTATCACCATCATTAGAAAATCTGGAATTTAGTTGTTTTATTTAGTTAGAAAGGGATGTTTCTGGCTGATTGGGGTTCAACCAGTCATATCAAGAAGTTAGTAGAAAGAATGTATCTTTCTATTTGGAAACTACAAAAATGGCTTTATCTTTGTATTCAGTGAATGATTGGTATTATCAAGCAAATGCGTCAGGCTCATGAAAAATGATGCAGATGGTGGTTGGGTTGATCATTCATGTGTGCTAGTACATTAGAAAATATTATTACGATGTTGCATTCTCTGATGTTTCGTACAATAAATGCCTGTGGTTGAATGTTCGGGAAACATTGACGATGGCTAAAAGCTAACTTCTATGGATGCAAAACTTTCCCCCTCATTTACAGAAGGAAGTATGTGTAGTAGTTAGAGCTGTTAATAGTTAATCACATCTTCATTCTAAAGTTTTTCTCCTTGTATCGGGAAATATTTTCTTTGATGGGAAGGTCAAATAAACATGTTGATGTATTAATCCACTTGTTTTCAGAATTATCAGCCTGGTTATACCTTGCCCACACCTCCCCCTCACACAGAAGATGCCACCATCGATATCAGGCAAGTTTTGATTCTCCTAGTTTGCTCATGAATTTCTACTAACACATAGTTTTAGAGGTGGTTGTATTATTTACTCTTTTCTTTGTTGGATAACTGATTCAATTTGACTTCTTGTTGCTTTTCGAATTCCCCCTCTCTGTTTTGTCATTAGAAGGTCTAATCCTTGATTTTTCTGTTCCTCACATGTGTCTTGCAGTGAAGGTTGGGCAGTCTCTGAAACTGCCTTAGATTTGCACGATCCACGACTTTTGGCAATGGCAGAACGCCACTTTCTTGAGGCAGAATATGATGAATATGCTGATGCCAGTGCGAATGGAACTGCATTTTGCCGATCTGCTGCTCTTATTGTGAGACTCATGATCTTCTGACTAATTTCCCATGTTAGATACTGTTTTTTGTTAATCCAGAGTTGGTTGAAGTCTGTCAACATCAAGAAGTTCTCTGTAGTTTTATATCAATGATCTCTTTCTCTCTGTTAACTTTATCACAGAAGATTGGTTTTTCACACCATTGTGTTGATTATTACTGTTGTTTCTTGACAGTTATTGGCTCTTTTACTGTTGAGGCATGCTCTGTACCTTACAAACGGTGACGGAGAAGATGATGCTTACACTTTCTTCTCGGTAAGTAAGACGTCAAATTTTTTTACCTTCAGTACTATAATGCTTGTTACTGGTTGTTGATAACTTTTATGTAAATTGACAGCTTTTATTGCTGCGAGCTGCTGGTTTTCTTCTTCCTTGTTACATCATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGTGCGATGTGATGATGTTGGAAGAGCTGGTTTTATGTTTCAAATTCACATAATTATCATAATTCTCTCAAAAGATATTTCGGTTTTCATTCTTCAAATGTTTCTGAAAAACTTGAATTCTTGTTCTTTGATCGTTTACAGGAAGCAGCTGCTCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAGGTCAGAGCCTGCAGTTTACCCTTGCTCCAGGGCCCGTAGTTACTCCTCATCCGGAGCCACTCCAA ATGGGTGATCACATGGTTTTATGTGTGGACCGCCTCATAACATCTGAAAGTTTGCCATTGCTGCAAGGAACTACTGCTCCAGGATCTTCTTTAGAACCTTCATCTTCTCAGAATTCAGAGCCACCTGTTTGTGCTATTTCTGTTGAAGATGCGGATGAACATGATGGATCTGAAGATGACCCCCTTATTCAGACAGTTGAATGTCGCATATGTCAAGAAGAGGATAGTATTAAGAATTTGGAGATTCCTTGTGCTTGCAGTGGCAGCTTGAAGTATGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAAAAGGGAGATATAACTTGTGAAATCTGTCATCAGAATTATCAGCCTGGTTATACCTTGCCCACACCTCCCCCTCACACAGAAGATGCCACCATCGATATCAGGGAAGGTTGGGCAGTCTCTGAAACTGCCTTAGATTTGCACGATCCACGACTTTTGGCAATGGCAGAACGCCACTTTCTTGAGGCAGAATATGATGAATATGCTGATGCCAGTGCGAATGGAACTGCATTTTGCCGATCTGCTGCTCTTATTTTATTGGCTCTTTTACTGTTGAGGCATGCTCTGTACCTTACAAACGGTGACGGAGAAGATGATGCTTACACTTTCTTCTCGCTTTTATTGCTGCGAGCTGCTGGTTTTCTTCTTCCTTGTTACATCATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGAAGCAGCTGCTCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAGGTCAGAGCCTGCAGTTTACCCTTGCTCCAGGGCCCGTAGTTACTCCTCATCCGGAGCCACTCCAA ATGGGTGATCACATGGTTTTATGTGTGGACCGCCTCATAACATCTGAAAGTTTGCCATTGCTGCAAGGAACTACTGCTCCAGGATCTTCTTTAGAACCTTCATCTTCTCAGAATTCAGAGCCACCTGTTTGTGCTATTTCTGTTGAAGATGCGGATGAACATGATGGATCTGAAGATGACCCCCTTATTCAGACAGTTGAATGTCGCATATGTCAAGAAGAGGATAGTATTAAGAATTTGGAGATTCCTTGTGCTTGCAGTGGCAGCTTGAAGTATGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAAAAGGGAGATATAACTTGTGAAATCTGTCATCAGAATTATCAGCCTGGTTATACCTTGCCCACACCTCCCCCTCACACAGAAGATGCCACCATCGATATCAGGGAAGGTTGGGCAGTCTCTGAAACTGCCTTAGATTTGCACGATCCACGACTTTTGGCAATGGCAGAACGCCACTTTCTTGAGGCAGAATATGATGAATATGCTGATGCCAGTGCGAATGGAACTGCATTTTGCCGATCTGCTGCTCTTATTTTATTGGCTCTTTTACTGTTGAGGCATGCTCTGTACCTTACAAACGGTGACGGAGAAGATGATGCTTACACTTTCTTCTCGCTTTTATTGCTGCGAGCTGCTGGTTTTCTTCTTCCTTGTTACATCATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGAAGCAGCTGCTCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAGGTCAGAGCCTGCAGTTTACCCTTGCTCCAGGGCCCGTAGTTACTCCTCATCCGGAGCCACTCCAA MGDHMVLCVDRLITSESLPLLQGTTAPGSSLEPSSSQNSEPPVCAISVEDADEHDGSEDDPLIQTVECRICQEEDSIKNLEIPCACSGSLKYAHRKCVQRWCNEKGDITCEICHQNYQPGYTLPTPPPHTEDATIDIREGWAVSETALDLHDPRLLAMAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFSLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTLAPGPVVTPHPEPLQ Homology
BLAST of MS003947 vs. NCBI nr
Match: XP_022137503.1 (uncharacterized protein LOC111008933 [Momordica charantia] >XP_022137504.1 uncharacterized protein LOC111008933 [Momordica charantia]) HSP 1 Score: 570.5 bits (1469), Expect = 8.3e-159 Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0
BLAST of MS003947 vs. NCBI nr
Match: XP_004137411.1 (uncharacterized protein LOC101217964 [Cucumis sativus] >KGN64004.1 hypothetical protein Csa_013088 [Cucumis sativus]) HSP 1 Score: 538.5 bits (1386), Expect = 3.5e-149 Identity = 269/287 (93.73%), Postives = 276/287 (96.17%), Query Frame = 0
BLAST of MS003947 vs. NCBI nr
Match: XP_022948839.1 (uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_022948840.1 uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_022948841.1 uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_023524494.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >XP_023524495.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >XP_023524496.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >KAG7037106.1 putative E3 ubiquitin ligase SUD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 538.1 bits (1385), Expect = 4.6e-149 Identity = 271/287 (94.43%), Postives = 275/287 (95.82%), Query Frame = 0
BLAST of MS003947 vs. NCBI nr
Match: XP_008442459.1 (PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >XP_008442534.1 PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >XP_008442612.1 PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >TYJ98894.1 RING/FYVE/PHD zinc finger superfamily protein isoform 3 [Cucumis melo var. makuwa]) HSP 1 Score: 537.3 bits (1383), Expect = 7.8e-149 Identity = 268/287 (93.38%), Postives = 276/287 (96.17%), Query Frame = 0
BLAST of MS003947 vs. NCBI nr
Match: XP_022997977.1 (uncharacterized protein LOC111492770 [Cucurbita maxima] >XP_022997978.1 uncharacterized protein LOC111492770 [Cucurbita maxima] >XP_022997979.1 uncharacterized protein LOC111492770 [Cucurbita maxima]) HSP 1 Score: 534.6 bits (1376), Expect = 5.0e-148 Identity = 270/287 (94.08%), Postives = 274/287 (95.47%), Query Frame = 0
BLAST of MS003947 vs. ExPASy Swiss-Prot
Match: Q86YJ5 (E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07 Identity = 29/78 (37.18%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of MS003947 vs. ExPASy Swiss-Prot
Match: Q0P496 (E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.3e-07 Identity = 28/82 (34.15%), Postives = 41/82 (50.00%), Query Frame = 0
BLAST of MS003947 vs. ExPASy Swiss-Prot
Match: Q32L65 (E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.9e-07 Identity = 26/75 (34.67%), Postives = 37/75 (49.33%), Query Frame = 0
BLAST of MS003947 vs. ExPASy Swiss-Prot
Match: Q99M02 (E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=MARCHF2 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.0e-07 Identity = 25/75 (33.33%), Postives = 37/75 (49.33%), Query Frame = 0
BLAST of MS003947 vs. ExPASy Swiss-Prot
Match: Q5I0I2 (E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.0e-07 Identity = 25/75 (33.33%), Postives = 37/75 (49.33%), Query Frame = 0
BLAST of MS003947 vs. ExPASy TrEMBL
Match: A0A6J1C7E4 (uncharacterized protein LOC111008933 OS=Momordica charantia OX=3673 GN=LOC111008933 PE=4 SV=1) HSP 1 Score: 570.5 bits (1469), Expect = 4.0e-159 Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0
BLAST of MS003947 vs. ExPASy TrEMBL
Match: A0A0A0LSR3 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033230 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149 Identity = 269/287 (93.73%), Postives = 276/287 (96.17%), Query Frame = 0
BLAST of MS003947 vs. ExPASy TrEMBL
Match: A0A6J1GB12 (uncharacterized protein LOC111452382 OS=Cucurbita moschata OX=3662 GN=LOC111452382 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 2.2e-149 Identity = 271/287 (94.43%), Postives = 275/287 (95.82%), Query Frame = 0
BLAST of MS003947 vs. ExPASy TrEMBL
Match: A0A1S3B5L6 (uncharacterized protein LOC103486295 OS=Cucumis melo OX=3656 GN=LOC103486295 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 3.8e-149 Identity = 268/287 (93.38%), Postives = 276/287 (96.17%), Query Frame = 0
BLAST of MS003947 vs. ExPASy TrEMBL
Match: A0A5D3BIK6 (RING/FYVE/PHD zinc finger superfamily protein isoform 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00910 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 3.8e-149 Identity = 268/287 (93.38%), Postives = 276/287 (96.17%), Query Frame = 0
BLAST of MS003947 vs. TAIR 10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 325.5 bits (833), Expect = 4.3e-89 Identity = 180/290 (62.07%), Postives = 209/290 (72.07%), Query Frame = 0
BLAST of MS003947 vs. TAIR 10
Match: AT3G47550.6 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 325.5 bits (833), Expect = 4.3e-89 Identity = 180/290 (62.07%), Postives = 209/290 (72.07%), Query Frame = 0
BLAST of MS003947 vs. TAIR 10
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 319.7 bits (818), Expect = 2.4e-87 Identity = 182/306 (59.48%), Postives = 212/306 (69.28%), Query Frame = 0
BLAST of MS003947 vs. TAIR 10
Match: AT3G47550.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 298.5 bits (763), Expect = 5.7e-81 Identity = 161/249 (64.66%), Postives = 184/249 (73.90%), Query Frame = 0
BLAST of MS003947 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 298.1 bits (762), Expect = 7.4e-81 Identity = 161/243 (66.26%), Postives = 192/243 (79.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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