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MS003946 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTACTTCTTTGGATTGGGTTTTTGGCTCTTCAACCAGAAGGAACCAGTGGGTTGACAAACATTGATCTAGCACTCAGATGGGAGAAACCACAAGTTCCCATTTTTAACAGCTTCAAGTTTGTGAAGGATGCATCTCTTGGGGATGATTGGCAGAGAACAGTGGCTTTTGCACCGGCACCTTCGACCGGTTTAGATCCCACCCAATTGAATAAGAGAAGAATCCGAAGAGGATCCGATCCCATTCACAACAAATGT ATTCTACTTCTTTGGATTGGGTTTTTGGCTCTTCAACCAGAAGGAACCAGTGGGTTGACAAACATTGATCTAGCACTCAGATGGGAGAAACCACAAGTTCCCATTTTTAACAGCTTCAAGTTTGTGAAGGATGCATCTCTTGGGGATGATTGGCAGAGAACAGTGGCTTTTGCACCGGCACCTTCGACCGGTTTAGATCCCACCCAATTGAATAAGAGAAGAATCCGAAGAGGATCCGATCCCATTCACAACAAATGT ATTCTACTTCTTTGGATTGGGTTTTTGGCTCTTCAACCAGAAGGAACCAGTGGGTTGACAAACATTGATCTAGCACTCAGATGGGAGAAACCACAAGTTCCCATTTTTAACAGCTTCAAGTTTGTGAAGGATGCATCTCTTGGGGATGATTGGCAGAGAACAGTGGCTTTTGCACCGGCACCTTCGACCGGTTTAGATCCCACCCAATTGAATAAGAGAAGAATCCGAAGAGGATCCGATCCCATTCACAACAAATGT ILLLWIGFLALQPEGTSGLTNIDLALRWEKPQVPIFNSFKFVKDASLGDDWQRTVAFAPAPSTGLDPTQLNKRRIRRGSDPIHNKC Homology
BLAST of MS003946 vs. NCBI nr
Match: KGN64003.1 (hypothetical protein Csa_013092 [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 4.3e-34 Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of MS003946 vs. NCBI nr
Match: KAA0036085.1 (CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa] >TYJ98893.1 CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa]) HSP 1 Score: 151.8 bits (382), Expect = 2.8e-33 Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of MS003946 vs. NCBI nr
Match: KAG6584463.1 (hypothetical protein SDJN03_20395, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32 Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of MS003946 vs. NCBI nr
Match: KAG6607448.1 (E3 ubiquitin-protein ligase MARCHF9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.7 bits (317), Expect = 9.6e-26 Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of MS003946 vs. NCBI nr
Match: KAG7037105.1 (hypothetical protein SDJN02_00726, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114.0 bits (284), Expect = 6.4e-22 Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 0
BLAST of MS003946 vs. ExPASy TrEMBL
Match: A0A0A0LQI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033220 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.1e-34 Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of MS003946 vs. ExPASy TrEMBL
Match: A0A5D3BHX9 (CLAVATA3/ESR (CLE)-related protein 45 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00900 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33 Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of MS003946 vs. ExPASy TrEMBL
Match: A0A2P5F704 (CLAVATA3/ESR-RELATED OS=Trema orientale OX=63057 GN=TorRG33x02_105720 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17 Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 0
BLAST of MS003946 vs. ExPASy TrEMBL
Match: A0A7N2MQ95 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of MS003946 vs. ExPASy TrEMBL
Match: A0A7J6EHR9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_026456 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.3e-17 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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