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MS003944 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGAAAAGACAAGTTGTAGTAAAAAGATCAGAGGGATCATCGAATAGAAACAGCAGCAGTACTTCATCTTCAGTGGTGAGAAGTGTGGTGAGATATGGGGAGTGCCAGAAGAATCATGCGGCCAATATTGGAGGATATGCTGTGGATGGTTGCAGAGAATTCTTGGCCACTGGAGAAGAAGGCTCTAATGGAGCTCTTACTTGTGCTGCTTGTGGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAATCTGAAGTGGTTTGTGAGTATTCTCCCCCT ATGATGAAGAAAAGACAAGTTGTAGTAAAAAGATCAGAGGGATCATCGAATAGAAACAGCAGCAGTACTTCATCTTCAGTGGTGAGAAGTGTGGTGAGATATGGGGAGTGCCAGAAGAATCATGCGGCCAATATTGGAGGATATGCTGTGGATGGTTGCAGAGAATTCTTGGCCACTGGAGAAGAAGGCTCTAATGGAGCTCTTACTTGTGCTGCTTGTGGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAATCTGAAGTGGTTTGTGAGTATTCTCCCCCT ATGATGAAGAAAAGACAAGTTGTAGTAAAAAGATCAGAGGGATCATCGAATAGAAACAGCAGCAGTACTTCATCTTCAGTGGTGAGAAGTGTGGTGAGATATGGGGAGTGCCAGAAGAATCATGCGGCCAATATTGGAGGATATGCTGTGGATGGTTGCAGAGAATTCTTGGCCACTGGAGAAGAAGGCTCTAATGGAGCTCTTACTTGTGCTGCTTGTGGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAATCTGAAGTGGTTTGTGAGTATTCTCCCCCT MMKKRQVVVKRSEGSSNRNSSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLATGEEGSNGALTCAACGCHRNFHRREVESEVVCEYSPP Homology
BLAST of MS003944 vs. NCBI nr
Match: XP_022137501.1 (mini zinc finger protein 2 [Momordica charantia]) HSP 1 Score: 177.9 bits (450), Expect = 4.0e-41 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MS003944 vs. NCBI nr
Match: XP_022949221.1 (mini zinc finger protein 1 [Cucurbita moschata] >XP_022998151.1 mini zinc finger protein 1 [Cucurbita maxima] >XP_023525792.1 mini zinc finger protein 1 [Cucurbita pepo subsp. pepo] >KAG6607446.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037103.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of MS003944 vs. NCBI nr
Match: KAA0036083.1 (mini zinc finger protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38 Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MS003944 vs. NCBI nr
Match: XP_008442199.1 (PREDICTED: mini zinc finger protein 1 [Cucumis melo] >TYJ98891.1 mini zinc finger protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 167.5 bits (423), Expect = 5.4e-38 Identity = 88/104 (84.62%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of MS003944 vs. NCBI nr
Match: XP_004137410.1 (mini zinc finger protein 1 [Cucumis sativus] >KGN64001.1 hypothetical protein Csa_013249 [Cucumis sativus]) HSP 1 Score: 165.6 bits (418), Expect = 2.1e-37 Identity = 87/104 (83.65%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of MS003944 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 7.8e-32 Identity = 70/100 (70.00%), Postives = 81/100 (81.00%), Query Frame = 0
BLAST of MS003944 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 9.6e-30 Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of MS003944 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.8e-29 Identity = 65/94 (69.15%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of MS003944 vs. ExPASy Swiss-Prot
Match: Q0J5F8 (Mini zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF4 PE=2 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 2.4e-20 Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of MS003944 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-19 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of MS003944 vs. ExPASy TrEMBL
Match: A0A6J1C6T5 (mini zinc finger protein 2 OS=Momordica charantia OX=3673 GN=LOC111008932 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.9e-41 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MS003944 vs. ExPASy TrEMBL
Match: A0A6J1K9G7 (mini zinc finger protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492884 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.3e-40 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of MS003944 vs. ExPASy TrEMBL
Match: A0A6J1GBE8 (mini zinc finger protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111452637 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.3e-40 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of MS003944 vs. ExPASy TrEMBL
Match: A0A5A7SZK7 (Mini zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00780 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 9.0e-39 Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MS003944 vs. ExPASy TrEMBL
Match: A0A5D3BJJ4 (Mini zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00880 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38 Identity = 88/104 (84.62%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of MS003944 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 ) HSP 1 Score: 137.5 bits (345), Expect = 5.6e-33 Identity = 70/100 (70.00%), Postives = 81/100 (81.00%), Query Frame = 0
BLAST of MS003944 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 ) HSP 1 Score: 130.6 bits (327), Expect = 6.8e-31 Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of MS003944 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger ) HSP 1 Score: 128.3 bits (321), Expect = 3.4e-30 Identity = 65/94 (69.15%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of MS003944 vs. TAIR 10
Match: AT2G02540.1 (homeobox protein 21 ) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-19 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of MS003944 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 ) HSP 1 Score: 90.9 bits (224), Expect = 6.0e-19 Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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