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MS003939 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTCAAGGGAATAAGATGACTCGGGAAAGAGTTATAAGAGTTCTCCCAGATATATTTGAACTTGTAACCAGTGAAATGATGATGGATGGCTCCAGGTTTGTTTCCTCTACATTTCTCAATCTTCCATATTTGAGATCTGGTCTATCGTCTACGGTTCTGAACAAATAGAGCCGCAACTATTTGAATCCTCATCTAGCAAGGAATCTATTAATTTCCCCTTGCCAGATGATGACTCTCTCATAGAACAGGTGAAG GTTCAAGGGAATAAGATGACTCGGGAAAGAGTTATAAGAGTTCTCCCAGATATATTTGAACTTGTAACCAGTGAAATGATGATGGATGGCTCCAGGTTTGTTTCCTCTACATTTTCTTCCATATTTGAGATCTGGTCTATCGTCTACGGTTCTGAACAAATAGAGCCGCAACTATTTGAATCCTCATCTAGCAAGGAATCTATTAATTTCCCCTTGCCAGATGATGACTCTCTCATAGAACAGGTGAAG GTTCAAGGGAATAAGATGACTCGGGAAAGAGTTATAAGAGTTCTCCCAGATATATTTGAACTTGTAACCAGTGAAATGATGATGGATGGCTCCAGGTTTGTTTCCTCTACATTTTCTTCCATATTTGAGATCTGGTCTATCGTCTACGGTTCTGAACAAATAGAGCCGCAACTATTTGAATCCTCATCTAGCAAGGAATCTATTAATTTCCCCTTGCCAGATGATGACTCTCTCATAGAACAGGTGAAG VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK Homology
BLAST of MS003939 vs. NCBI nr
Match: XP_022133898.1 (putative callose synthase 8 [Momordica charantia]) HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18 Identity = 57/84 (67.86%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of MS003939 vs. NCBI nr
Match: XP_038897951.1 (putative callose synthase 8 isoform X3 [Benincasa hispida]) HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of MS003939 vs. NCBI nr
Match: XP_038897952.1 (putative callose synthase 8 isoform X4 [Benincasa hispida]) HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of MS003939 vs. NCBI nr
Match: XP_038897950.1 (putative callose synthase 8 isoform X2 [Benincasa hispida]) HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of MS003939 vs. NCBI nr
Match: XP_038897949.1 (putative callose synthase 8 isoform X1 [Benincasa hispida]) HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of MS003939 vs. ExPASy Swiss-Prot
Match: Q9LUD7 (Putative callose synthase 8 OS=Arabidopsis thaliana OX=3702 GN=CALS8 PE=3 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 2.2e-06 Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of MS003939 vs. ExPASy TrEMBL
Match: A0A6J1C0H9 (1,3-beta-glucan synthase OS=Momordica charantia OX=3673 GN=LOC111006332 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18 Identity = 57/84 (67.86%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of MS003939 vs. ExPASy TrEMBL
Match: A0A5A7VNM2 (1,3-beta-glucan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002730 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.5e-17 Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of MS003939 vs. ExPASy TrEMBL
Match: A0A6J1ITG5 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111480441 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of MS003939 vs. ExPASy TrEMBL
Match: A0A6J1IW07 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111480441 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of MS003939 vs. ExPASy TrEMBL
Match: A0A6J1IYY5 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111480441 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of MS003939 vs. TAIR 10
Match: AT3G14570.1 (glucan synthase-like 4 ) HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07 Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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