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MS003932 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTTTGCAGATATGCCTCAATCAGAGCCATCGAGACCAAATCCCCCACCGACGATCAGCAATGGCTTACTTATTGGGTTTTGCACTCCATGATTACTCTCTTCGAGCTGACCTTCTCCAAGGTTCTTGAATGGTAGGCATTTAGGAGCTTCTGCTTTCATAACTGCTTCGAGTTTCATCTACCCACTGGAAGTTTCTGAGGTAATATTTCATGGCAGGATCCCCATATGGCCATATGCGAAGCTGGTTCTGCTCTGTTGGTTGTCGGGCTTCAACGGAGCTGCGCATGTGTACGAGCATTATCTAAGACCTCTAATGGTGAACCAGCAGAAAGTGAACGTTTGGTATGTTCCAAAGGGAAAGGACCCTTTGAACAAGCGCGAGGACATTATCACTGCTGCAGAGAAGTACATCCAGGAGCATGGAACTGGAGAACTTCAATACATGCTT ATTTTTTGCAGATATGCCTCAATCAGAGCCATCGAGACCAAATCCCCCACCGACGATCAGCAATGGCTTACTTATTGGGTTTTGCACTCCATGATTACTCTCTTCGAGCTGACCTTCTCCAAGGTTCTTGAATGGATCCCCATATGGCCATATGCGAAGCTGGTTCTGCTCTGTTGGTTGTCGGGCTTCAACGGAGCTGCGCATGTGTACGAGCATTATCTAAGACCTCTAATGGTGAACCAGCAGAAAGTGAACGTTTGGTATGTTCCAAAGGGAAAGGACCCTTTGAACAAGCGCGAGGACATTATCACTGCTGCAGAGAAGTACATCCAGGAGCATGGAACTGGAGAACTTCAATACATGCTT ATTTTTTGCAGATATGCCTCAATCAGAGCCATCGAGACCAAATCCCCCACCGACGATCAGCAATGGCTTACTTATTGGGTTTTGCACTCCATGATTACTCTCTTCGAGCTGACCTTCTCCAAGGTTCTTGAATGGATCCCCATATGGCCATATGCGAAGCTGGTTCTGCTCTGTTGGTTGTCGGGCTTCAACGGAGCTGCGCATGTGTACGAGCATTATCTAAGACCTCTAATGGTGAACCAGCAGAAAGTGAACGTTTGGTATGTTCCAAAGGGAAAGGACCCTTTGAACAAGCGCGAGGACATTATCACTGCTGCAGAGAAGTACATCCAGGAGCATGGAACTGGAGAACTTCAATACATGCTT IFCRYASIRAIETKSPTDDQQWLTYWVLHSMITLFELTFSKVLEWIPIWPYAKLVLLCWLSGFNGAAHVYEHYLRPLMVNQQKVNVWYVPKGKDPLNKREDIITAAEKYIQEHGTGELQYML Homology
BLAST of MS003932 vs. NCBI nr
Match: XP_022137380.1 (HVA22-like protein a [Momordica charantia]) HSP 1 Score: 254.6 bits (649), Expect = 4.3e-64 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of MS003932 vs. NCBI nr
Match: XP_038893618.1 (HVA22-like protein a [Benincasa hispida]) HSP 1 Score: 241.9 bits (616), Expect = 2.9e-60 Identity = 111/122 (90.98%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of MS003932 vs. NCBI nr
Match: XP_008440737.1 (PREDICTED: HVA22-like protein a [Cucumis melo] >KAA0036071.1 HVA22-like protein a [Cucumis melo var. makuwa] >TYJ98878.1 HVA22-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 240.7 bits (613), Expect = 6.4e-60 Identity = 110/122 (90.16%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of MS003932 vs. NCBI nr
Match: XP_004137404.1 (HVA22-like protein a [Cucumis sativus] >KGN63983.1 hypothetical protein Csa_013507 [Cucumis sativus]) HSP 1 Score: 240.7 bits (613), Expect = 6.4e-60 Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of MS003932 vs. NCBI nr
Match: XP_022949577.1 (HVA22-like protein a [Cucurbita moschata]) HSP 1 Score: 231.1 bits (588), Expect = 5.1e-57 Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of MS003932 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 6.5e-39 Identity = 69/124 (55.65%), Postives = 97/124 (78.23%), Query Frame = 0
BLAST of MS003932 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.2e-34 Identity = 67/129 (51.94%), Postives = 93/129 (72.09%), Query Frame = 0
BLAST of MS003932 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 7.2e-30 Identity = 62/121 (51.24%), Postives = 85/121 (70.25%), Query Frame = 0
BLAST of MS003932 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.2e-18 Identity = 39/73 (53.42%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of MS003932 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-15 Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of MS003932 vs. ExPASy TrEMBL
Match: A0A6J1C6H3 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111008847 PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of MS003932 vs. ExPASy TrEMBL
Match: A0A5D3BL17 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00740 PE=3 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.1e-60 Identity = 110/122 (90.16%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of MS003932 vs. ExPASy TrEMBL
Match: A0A0A0LQD1 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G033020 PE=3 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.1e-60 Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of MS003932 vs. ExPASy TrEMBL
Match: A0A1S3B2F5 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103485036 PE=3 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.1e-60 Identity = 110/122 (90.16%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of MS003932 vs. ExPASy TrEMBL
Match: A0A6J1KHX1 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493378 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.5e-57 Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of MS003932 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 161.4 bits (407), Expect = 4.6e-40 Identity = 69/124 (55.65%), Postives = 97/124 (78.23%), Query Frame = 0
BLAST of MS003932 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35 Identity = 67/129 (51.94%), Postives = 93/129 (72.09%), Query Frame = 0
BLAST of MS003932 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 131.3 bits (329), Expect = 5.1e-31 Identity = 62/121 (51.24%), Postives = 85/121 (70.25%), Query Frame = 0
BLAST of MS003932 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19 Identity = 39/73 (53.42%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of MS003932 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 84.0 bits (206), Expect = 9.4e-17 Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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