MS003867 (gene) Bitter gourd (TR) v1

Overview


Name	MS003867
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	mitochondrial import inner membrane translocase subunit TIM17-2-like
Location	scaffold127: 1113518 .. 1114198 (+)
RNA-Seq Expression	MS003867
Synteny	MS003867

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACGCCGGAGACTTCTCGGGAGCCTTGTCCAGATCGGATCCTCGACGACATCGGCGGCGCCTTCGGTATGGGCGCCGTCGGTGGCTCCGCTTTCCACTTTCTCAAAGGCGTCTACAGTTCCCCTAAAGGCGCTCGCCTCCTCGGCGGTTCTCAAGCCATCCGTATGAACGCGCCCCGTATCGGCGGTAGCTTTGCGGTCTGGGGCGGATTGTTCTCCACTTTCGATTGCTCAATGGTCTACGTCCGCCAGAAGGAAGATCCATGGAACTCGATCATAGCTGGTGCCGCTACCGGTGGATTCCTCCAGATGCGCCAGGGTTTTCGCGCCTCCGCACGCTCGGCCGTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGAGCCGGGATCATGCTGAATAAGCTGCTTAGTCAGCCGCAGAACGCCCCTATTATGATCGACGACGCCGGTGCCATGGGCGGCGTCCCTGGTTACCCCATGGACCAGATACCGGGTCTAACGCCGCCGCAGACTCTTCCTCAGGCGGCTTCGAGTCCGGGGTCTTCAGGATCGGGATCATGGTTCGGAGGATGGTTCGGTGGCGGGCAGAAAAAGGATTCGGAGGCAGCTCGTGGGGACGGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAGTACAAG

mRNA sequence

ATGGGAACGCCGGAGACTTCTCGGGAGCCTTGTCCAGATCGGATCCTCGACGACATCGGCGGCGCCTTCGGTATGGGCGCCGTCGGTGGCTCCGCTTTCCACTTTCTCAAAGGCGTCTACAGTTCCCCTAAAGGCGCTCGCCTCCTCGGCGGTTCTCAAGCCATCCGTATGAACGCGCCCCGTATCGGCGGTAGCTTTGCGGTCTGGGGCGGATTGTTCTCCACTTTCGATTGCTCAATGGTCTACGTCCGCCAGAAGGAAGATCCATGGAACTCGATCATAGCTGGTGCCGCTACCGGTGGATTCCTCCAGATGCGCCAGGGTTTTCGCGCCTCCGCACGCTCGGCCGTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGAGCCGGGATCATGCTGAATAAGCTGCTTAGTCAGCCGCAGAACGCCCCTATTATGATCGACGACGCCGGTGCCATGGGCGGCGTCCCTGGTTACCCCATGGACCAGATACCGGGTCTAACGCCGCCGCAGACTCTTCCTCAGGCGGCTTCGAGTCCGGGGTCTTCAGGATCGGGATCATGGTTCGGAGGATGGTTCGGTGGCGGGCAGAAAAAGGATTCGGAGGCAGCTCGTGGGGACGGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAGTACAAG

Coding sequence (CDS)

ATGGGAACGCCGGAGACTTCTCGGGAGCCTTGTCCAGATCGGATCCTCGACGACATCGGCGGCGCCTTCGGTATGGGCGCCGTCGGTGGCTCCGCTTTCCACTTTCTCAAAGGCGTCTACAGTTCCCCTAAAGGCGCTCGCCTCCTCGGCGGTTCTCAAGCCATCCGTATGAACGCGCCCCGTATCGGCGGTAGCTTTGCGGTCTGGGGCGGATTGTTCTCCACTTTCGATTGCTCAATGGTCTACGTCCGCCAGAAGGAAGATCCATGGAACTCGATCATAGCTGGTGCCGCTACCGGTGGATTCCTCCAGATGCGCCAGGGTTTTCGCGCCTCCGCACGCTCGGCCGTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGAGCCGGGATCATGCTGAATAAGCTGCTTAGTCAGCCGCAGAACGCCCCTATTATGATCGACGACGCCGGTGCCATGGGCGGCGTCCCTGGTTACCCCATGGACCAGATACCGGGTCTAACGCCGCCGCAGACTCTTCCTCAGGCGGCTTCGAGTCCGGGGTCTTCAGGATCGGGATCATGGTTCGGAGGATGGTTCGGTGGCGGGCAGAAAAAGGATTCGGAGGCAGCTCGTGGGGACGGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAGTACAAG

Protein sequence

MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAPRIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGGVLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSPGSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK

Homology

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BLAST of MS003867 vs. NCBI nr
Match: XP_022144978.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Momordica charantia])

HSP 1 Score: 459.5 bits (1181), Expect = 1.6e-125
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLP AASSP
Sbjct: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPHAASSP 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
           GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK
Sbjct: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 227

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BLAST of MS003867 vs. NCBI nr
Match: XP_038878607.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa hispida])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 210/229 (91.70%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKG+YSSPKGARLLGGSQA+RMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQGF ASARSA+FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAM GVPGYP+DQIPGLTPP+T   +++SP
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPVDQIPGLTPPET---SSASP 180

Query: 181 GSS--GSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
           GSS  GSGSWFGGWFGGGQKKDSEA RGDGETKILESFDSPPVPNFE+K
Sbjct: 181 GSSGAGSGSWFGGWFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

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BLAST of MS003867 vs. NCBI nr
Match: XP_022933996.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita moschata] >KAG6587998.1 Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021892.1 Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.9 bits (1091), Expect = 4.5e-115
Identity = 208/227 (91.63%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQA++MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQG  ASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLTPPQTLPQ A+  
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAA-- 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
             +GSGSWFGGWF GGQKKDSEA RG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 -GAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224

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BLAST of MS003867 vs. NCBI nr
Match: XP_023006791.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita maxima])

HSP 1 Score: 424.5 bits (1090), Expect = 5.9e-115
Identity = 208/227 (91.63%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQA++MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQG  ASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLTPPQTLPQ A+  
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAA-- 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
             +GSGSWFGGWF GGQKKD EA RG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 -GAGSGSWFGGWFNGGQKKDKEATRGESETKILESFDSPPVPNFEYK 224

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BLAST of MS003867 vs. NCBI nr
Match: XP_023529338.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.5 bits (1090), Expect = 5.9e-115
Identity = 208/227 (91.63%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQA++MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQG  ASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLTPPQTLPQ A+  
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAA-- 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
              GSGSWFGGWF GGQKKDSEA RG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 -GGGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224

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BLAST of MS003867 vs. ExPASy Swiss-Prot
Match: Q9SP35 (Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2)

HSP 1 Score: 304.7 bits (779), Expect = 8.9e-82
Identity = 158/247 (63.97%), Postives = 190/247 (76.92%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKG+R +GG+Q++ MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           R GGSFAVWGGLFSTFDC+MVY+RQKEDPWNSIIAGAATGGFL MRQG  A++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMG--------GVPGYP-MDQIPGLTPPQ 180
           VLLALIEGAGIMLNK+L+QPQN  +M++D G  G        G+PG P M  +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 -----------TLPQAASSPGSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPP 228
                      +  Q  ++  SS S SWFGG F   +KK+      + +T++LESFD+PP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

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BLAST of MS003867 vs. ExPASy Swiss-Prot
Match: Q9LN27 (Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis thaliana OX=3702 GN=TIM17-1 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.0e-74
Identity = 143/227 (63.00%), Postives = 173/227 (76.21%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H ++G+Y+SP GARL GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           R GGSF+VWGGL+STFDC++VY RQKEDPWNSI++GAATGGFL +RQG  ASARSA+ GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLA+IEG GIMLNK+ S   N   M D A     +P Y M QI G    Q++P   +S 
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAAT--SLP-YGMGQISG----QSVPVPETSS 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
            SSGS SWFG  F   +KK++E    +  T ILESFD+PPVP +E+K
Sbjct: 181 SSSGSVSWFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

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BLAST of MS003867 vs. ExPASy Swiss-Prot
Match: O60830 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens OX=9606 GN=TIMM17B PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.7e-40
Identity = 88/167 (52.69%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGA--RLLGGSQAIRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   RL G + A+R+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGGVL 124
           GGSFAVWGGLFST DC +V +R KEDPWNSI +GA TG  L  R G  A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKLLSQP-QNAPIMIDDAGAM-----GGVPGYPMDQ 164
           LALIEG GI+L +  +Q  +NAP  ++D   +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQ 169

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BLAST of MS003867 vs. ExPASy Swiss-Prot
Match: Q2HJE9 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus OX=9913 GN=TIMM17B PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.4e-40
Identity = 88/167 (52.69%), Postives = 109/167 (65.27%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGA--RLLGGSQAIRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   RL G   A+R+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGGVL 124
           GGSFAVWGGLFST DC +V +R KEDPWNSI +GA TG  L  R    A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKLLSQP-QNAPIMIDDAGAMGGV-----PGYPMDQ 164
           LALIEG GI+L +  +Q  +NAP  ++D G +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPGQLPSKEGTPGPGYPSYQ 169

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BLAST of MS003867 vs. ExPASy Swiss-Prot
Match: Q9Z0V7 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 86/164 (52.44%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGA--RLLGGSQAIRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   R  G   A+R+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGGVL 124
           GGSFAVWGGLFST DC +V +R KEDPWNSI +GA TG  L  R G  A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKLLSQP-QNAPIMIDDAGAM-----GGVPGYP 161
           LALIEG GI+L +  +Q  +NAP  ++D   +        PGYP
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLTPKEGSPAPGYP 166

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BLAST of MS003867 vs. ExPASy TrEMBL
Match: A0A6J1CUQ0 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordica charantia OX=3673 GN=LOC111014515 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.0e-126
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLP AASSP
Sbjct: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPHAASSP 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
           GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK
Sbjct: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 227

[Close]

BLAST of MS003867 vs. ExPASy TrEMBL
Match: A0A6J1F0K8 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111441235 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.2e-115
Identity = 208/227 (91.63%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQA++MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQG  ASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLTPPQTLPQ A+  
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAA-- 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
             +GSGSWFGGWF GGQKKDSEA RG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 -GAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224

[Close]

BLAST of MS003867 vs. ExPASy TrEMBL
Match: A0A6J1KYR6 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111499445 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.8e-115
Identity = 208/227 (91.63%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQA++MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQG  ASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLTPPQTLPQ A+  
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAA-- 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
             +GSGSWFGGWF GGQKKD EA RG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 -GAGSGSWFGGWFNGGQKKDKEATRGESETKILESFDSPPVPNFEYK 224

[Close]

BLAST of MS003867 vs. ExPASy TrEMBL
Match: A0A6J1JFI2 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485270 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.1e-114
Identity = 208/227 (91.63%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPK ARLLGGSQA+RMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKSARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQGF ASARSA+FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLT PQT  ++  S 
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTTPQTSGESLES- 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
             +GS SWFGGWFGGGQKKDSEA RGDGETKILESFDSPPVPNFEYK
Sbjct: 181 SHAGSESWFGGWFGGGQKKDSEATRGDGETKILESFDSPPVPNFEYK 226

[Close]

BLAST of MS003867 vs. ExPASy TrEMBL
Match: A0A6J1HAR7 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111461647 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.3e-114
Identity = 209/229 (91.27%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQA+RMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQGF ASARSA+FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPMDQIPGL  PQT   + +SP
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQT---SGASP 180

Query: 181 GSS--GSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
           GSS  GS SWFGGWFGGGQKKDSEA+RG+ +TKILESFDSPPVPNFEYK
Sbjct: 181 GSSNAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

[Close]

BLAST of MS003867 vs. TAIR 10
Match: AT2G37410.1 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 304.7 bits (779), Expect = 6.3e-83
Identity = 158/247 (63.97%), Postives = 190/247 (76.92%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKG+R +GG+Q++ MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           R GGSFAVWGGLFSTFDC+MVY+RQKEDPWNSIIAGAATGGFL MRQG  A++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMG--------GVPGYP-MDQIPGLTPPQ 180
           VLLALIEGAGIMLNK+L+QPQN  +M++D G  G        G+PG P M  +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 -----------TLPQAASSPGSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPP 228
                      +  Q  ++  SS S SWFGG F   +KK+      + +T++LESFD+PP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

[Close]

BLAST of MS003867 vs. TAIR 10
Match: AT2G37410.2 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 304.7 bits (779), Expect = 6.3e-83
Identity = 158/247 (63.97%), Postives = 190/247 (76.92%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKG+R +GG+Q++ MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           R GGSFAVWGGLFSTFDC+MVY+RQKEDPWNSIIAGAATGGFL MRQG  A++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMG--------GVPGYP-MDQIPGLTPPQ 180
           VLLALIEGAGIMLNK+L+QPQN  +M++D G  G        G+PG P M  +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 -----------TLPQAASSPGSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPP 228
                      +  Q  ++  SS S SWFGG F   +KK+      + +T++LESFD+PP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

[Close]

BLAST of MS003867 vs. TAIR 10
Match: AT1G20350.1 (translocase inner membrane subunit 17-1 )

HSP 1 Score: 279.3 bits (713), Expect = 2.8e-75
Identity = 143/227 (63.00%), Postives = 173/227 (76.21%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H ++G+Y+SP GARL GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           R GGSF+VWGGL+STFDC++VY RQKEDPWNSI++GAATGGFL +RQG  ASARSA+ GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPQAASSP 180
           VLLA+IEG GIMLNK+ S   N   M D A     +P Y M QI G    Q++P   +S 
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAAT--SLP-YGMGQISG----QSVPVPETSS 180

Query: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 228
            SSGS SWFG  F   +KK++E    +  T ILESFD+PPVP +E+K
Sbjct: 181 SSSGSVSWFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

[Close]

BLAST of MS003867 vs. TAIR 10
Match: AT5G11690.1 (translocase inner membrane subunit 17-3 )

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 74/126 (58.73%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60
           M T + S+E    RI++ IG AFG GAVGGS +HF++G Y+SP GAR +GG+QA  MNAP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120
           R+GG+FAV+GGL STFD ++V +R+KEDPWNSI+AGAATGG L +R+G  A++ SAV  G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 VLLALI 127
             LA++
Sbjct: 121 FFLAVL 126

[Close]

BLAST of MS003867 vs. TAIR 10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23 )

HSP 1 Score: 48.5 bits (114), Expect = 8.1e-06
Identity = 32/110 (29.09%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 20  GGAFGMGAVGGSAFHFLKGVYSSPKG-------ARLLGGS-QAIRMNAPRIGGSFAVWGG 79
           G  +  G+V G++     G+ S   G        R+L  S QA R    R+G    + G 
Sbjct: 64  GTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVG----IVGL 123

Query: 80  LFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGGV 122
           +++  +  +V V  K+D W S++AG  TG   +  +G R++A +  FGG+
Sbjct: 124 IYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGI 169

The following BLAST results are available for this feature:

BLAST of MS003867 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144978.1	1.6e-125	99.56	mitochondrial import inner membrane translocase subunit TIM17-2-like [Momordica ...	[more]
XP_038878607.1	2.6e-115	91.70	mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa ...	[more]
XP_022933996.1	4.5e-115	91.63	mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ...	[more]
XP_023006791.1	5.9e-115	91.63	mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ...	[more]
XP_023529338.1	5.9e-115	91.63	mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ...	[more]

BLAST of MS003867 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SP35	8.9e-82	63.97	Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis t...	[more]
Q9LN27	4.0e-74	63.00	Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis t...	[more]
O60830	1.7e-40	52.69	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens ...	[more]
Q2HJE9	8.4e-40	52.69	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus OX...	[more]
Q9Z0V7	1.1e-39	52.44	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus ...	[more]

BLAST of MS003867 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUQ0	8.0e-126	99.56	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordic...	[more]
A0A6J1F0K8	2.2e-115	91.63	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit...	[more]
A0A6J1KYR6	2.8e-115	91.63	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit...	[more]
A0A6J1JFI2	3.1e-114	91.63	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit...	[more]
A0A6J1HAR7	5.3e-114	91.27	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit...	[more]

BLAST of MS003867 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37410.1	6.3e-83	63.97	translocase inner membrane subunit 17-2	[more]
AT2G37410.2	6.3e-83	63.97	translocase inner membrane subunit 17-2	[more]
AT1G20350.1	2.8e-75	63.00	translocase inner membrane subunit 17-1	[more]
AT5G11690.1	1.2e-36	58.73	translocase inner membrane subunit 17-3	[more]
AT1G17530.1	8.1e-06	29.09	translocase of inner mitochondrial membrane 23	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 16..122 e-value: 2.0E-27 score: 95.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..227
None	No IPR available	PANTHER	PTHR10485:SF23	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM17-2-LIKE	coord: 1..227
None	No IPR available	PANTHER	PTHR10485	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17	coord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003867.1	MS003867.1	mRNA